FFCP PHASE1:Mm9::chr3:142058591..142058617,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr3:142058591..142058617,- | |id=chr3:142058591..142058617,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.33e-14!23;UBERON:0001009!2.33e-14!23;UBERON:0007100!1.21e-12!18;UBERON:0000948!1.21e-12!18;UBERON:0005498!1.21e-12!18;UBERON:0004140!1.21e-12!18;UBERON:0009881!1.21e-12!18;UBERON:0004141!1.21e-12!18;UBERON:0003084!1.21e-12!18;UBERON:0007005!1.21e-12!18;UBERON:0004139!1.21e-12!18;UBERON:0004291!1.21e-12!18;UBERON:0004872!2.22e-10!33;UBERON:0003914!8.54e-10!47;UBERON:0003103!2.54e-08!43 | |ontology_enrichment_uberon=UBERON:0004535!2.33e-14!23;UBERON:0001009!2.33e-14!23;UBERON:0007100!1.21e-12!18;UBERON:0000948!1.21e-12!18;UBERON:0005498!1.21e-12!18;UBERON:0004140!1.21e-12!18;UBERON:0009881!1.21e-12!18;UBERON:0004141!1.21e-12!18;UBERON:0003084!1.21e-12!18;UBERON:0007005!1.21e-12!18;UBERON:0004139!1.21e-12!18;UBERON:0004291!1.21e-12!18;UBERON:0004872!2.22e-10!33;UBERON:0003914!8.54e-10!47;UBERON:0003103!2.54e-08!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.33e-14,23;UBERON:0001009,2.33e-14,23;UBERON:0007100,1.21e-12,18;UBERON:0000948,1.21e-12,18;UBERON:0005498,1.21e-12,18;UBERON:0004140,1.21e-12,18;UBERON:0009881,1.21e-12,18;UBERON:0004141,1.21e-12,18;UBERON:0003084,1.21e-12,18;UBERON:0007005,1.21e-12,18;UBERON:0004139,1.21e-12,18;UBERON:0004291,1.21e-12,18;UBERON:0004872,2.22e-10,33;UBERON:0003914,8.54e-10,47;UBERON:0003103,2.54e-08,43 | |||
|phase1_expression=10.7299727560212,43.2729505472808,40.4949323056687,86.8072286450602,78.1397338716302,43.3128521532676,45.788077556723,8.39301602370246,61.66546030243,68.3468416860221,14.3823093309424,9.89174771542172,15.7504671536709,13.0256399604306,8.32774404539157,8.30148596298286,8.39474253753776,16.5617636813075,18.5104485367747,15.2780274647291,28.9997619415148,2.87943758482567,1.30599894569468,32.9584390954418,26.1526580416574,30.4342940980961,29.7225777349762,44.8180163986649,51.4963466726773,40.5768508913488,29.4901579171555,6.35030673459631,5.53558308826113,15.8481681015439,22.2415747208481,18.7845149255096,23.8878146826972,77.009820055591,38.2854318816662,54.9699931172488,124.705075462575,85.3806856198057,71.8555322486107,103.738978011876,113.035278309759,164.090796432543,95.4517440104608,59.084817379101,107.865915722626,135.128779856627,69.7132379694305,80.5014360443841,20.4694779390438,23.9369506863744,21.1739093459752,201.176878980111,157.879925406255,257.320374046444,5.46254444320914,5.81890077199236,10.1413024560989,67.7689064138264,83.5937108344471,29.2467408116455,30.6548572395762,23.4458437932213,37.1504137042822,45.3377600279434,3.52544681848824,2.70011876663381,2.52389953621658,21.4238238302853,21.4242484723065,2.57230678351403,2.87536413054709,3.67687514644008,7.70811166995721,21.7068474744819,20.1224558565679,7.64940468835124,7.77644970620482,9.37644067002168,13.959149950069,15.757353080887,19.8637722109853,27.9897156199984,33.0302299453919,10.2519695203915,19.1587269132956,24.0317561139578,114.786337525864,50.7650087419018,116.955069397733,38.318926606285,78.622946511168,48.3869038065122,212.913740919736,59.9914735474763,39.4874726996361,50.1742195804683,27.8869971157827,69.2962978037316,43.3168907501298,49.7746692207332,57.1536348269605,64.6067656961501,56.6187378416557,48.9848843994767,61.3682784243797,28.0555642832519,12.8379141806941,28.3152894830291,32.7474006103603,36.9270469353925,59.2647083963952,20.1066546127481,109.012980770859,99.0505594901395,163.652952110727,182.31123989073,129.633971336251,106.672555689749,54.0536107532554,18.1524094147159,18.431310199584,44.7049846615035,7.6681679683789,11.9980546198682,11.5633906636489,16.6267609739353,16.9275223042892,7.28795242254614,19.468323861535,10.7400492078739,22.2333207678729,19.3067103050632,22.6083387747702,93.0564140163496,28.5576717030052,77.0217192544495,21.9903548606969,17.012755728077,21.7875177064473,33.0043551060216,49.7346808796207,42.2775276940004,32.2333932485467,52.7754876307592,9.91612767491074,11.1572587299013,20.762232651346,27.837858018302,29.4730084179134,98.9036152922953,66.2618479233578,12.1410902759281,9.12877143507205,15.9555702411123,18.7547909601091,190.555710732662,154.08362140758,153.232814303324,162.880378082625,189.090426709255,211.500211768596,236.719555755915,266.127214188422,351.580445867547,255.561446915635,349.348363560315,438.420122023988,592.694749022297,729.34548299687,595.60808645853,19.5569652164638,12.3485534855141,79.3005079161115,54.2123661660266,28.7939138222566,25.5460339046482,29.2529137201152,34.2861991859682,42.0294502866805,48.8879859109277,45.5547899082731,56.3270425156117,33.9302531880364,32.2309484706664,41.3323864692535,56.625622745216,58.3572734661674,60.9372296158364,27.3121777372438,33.9318082450895,41.7018621990398,44.5996407981238,36.4630675875136,45.5882829287071,59.8850006566717,46.0543661696359,50.8675878206054,43.4358017004738,65.5160305862599,24.0256952231175,22.2111664477919,18.8884174403277,17.4459704394113,24.3588931349941,25.7172110299234,44.017509029974,36.3182907976079,39.2622820858956,40.2550978276593,42.4240680342094,57.7269695261937,51.0209333453166,64.5830688678884,43.9023604440664,57.4582421418141,25.2023577654745,23.9558515369778,15.9560380628677,17.8364588699262,34.0037702606886,39.5152443870783,51.3201493866011,44.610745782052,48.5007670330817,40.0231469330293,63.5789661097063,60.6124286349294,50.7718195621106,36.1899081454253,23.3879444042045,50.6517201209607,53.5317287831181,22.9587343682543,17.1129062424617,73.7707254195039,624.10813204921,47.957249351271,61.6893215988689,43.3001029442926,51.1393227618461,44.3369361423964,43.5937857414802,49.791716306012,63.1272653088434,45.8533822417967,17.6726724031994,33.0720398535266,19.4091507997308,29.971200521058,47.0164850471726,18.5843193675948,10.9251286269742,15.1161778482376,17.9174825768103,20.0805287158925,23.3650712437385,29.9776820075137,24.7202936044704,39.5712090007041,18.6461687182131,17.9211634577498,14.4389760547462,28.937366489072,16.5656206508805,10.0899773350549,13.9319072770535,23.9409315417069,25.6851097346982,24.6823530903181,14.6143175575008,86.8285319835728,102.526722298089,63.2916502417741,132.073888606126,137.083298264824,59.4082310542335,48.4651716652734,53.8382151163801,52.758031430003,35.2308073819968,18.9666677685616,26.2111322313293,30.5570970160024,17.5182665014363,18.3170265146174,19.9037010689675,6.62915876976036,7.41742697315387,6.90999869022119,55.3708958448766,11.0717597753397,37.614101418467,41.6900615572153,48.7175729713712,56.7742665740062,55.698975056931,58.5186466535378,82.9766336089374,30.4595187235713,65.8619671872141,7.89170114157866,13.0079395058262,11.4166358415397,9.13920585217024,10.2036260547408,11.8269287843545,12.0877955805127,10.2861464026721,15.4143236305795,14.4950472495604,72.2955315707242,12.6404448251271,6.08175645870493,8.11416561602135,8.31493267057888,9.13036147904155,11.1261558677508,9.01465871399766,11.0767145380933,7.97634954590366,5.41068327250499,9.98179232854721,10.0381617161945,8.46664206434899,8.88264456579924,176.169508069019,17.7588762699252,18.3913406049425,30.8907694109904,74.7643728904577,68.1287385887791,49.4509385521616,66.6685658935895,51.6619267156424,15.2482997506608,15.1907328047368,13.7494923225455,11.5141632170271,10.9613203163303,10.5755145634558,8.77529250301348,11.2580300806055,16.7662691324156,8.80192529978094,13.3885678383588,10.7736715818278,14.6830900948555,48.1351299795222,28.7170032800336,49.6377472815038,147.349580532471,139.485733750731,134.786068028562,142.521227434782,144.736680237327,144.487777501734,139.151280100245,129.074707248216,132.561062349555,138.601464163374,117.043169204304,135.615181985985,139.285034471518,150.731694217623,132.690400673156,145.885112662975,135.670192080026,128.776925136243,135.517507798076,116.852773498405,122.378813851885,134.1655528333,141.236278399696,148.702701989301,120.414543396037,115.053235414658,117.449309389701,127.51302029605,104.74828976276,45.7153357626441,165.857510387795,173.615811671025,371.673229209763,174.487812523537,209.14478772962 | |phase1_expression=10.7299727560212,43.2729505472808,40.4949323056687,86.8072286450602,78.1397338716302,43.3128521532676,45.788077556723,8.39301602370246,61.66546030243,68.3468416860221,14.3823093309424,9.89174771542172,15.7504671536709,13.0256399604306,8.32774404539157,8.30148596298286,8.39474253753776,16.5617636813075,18.5104485367747,15.2780274647291,28.9997619415148,2.87943758482567,1.30599894569468,32.9584390954418,26.1526580416574,30.4342940980961,29.7225777349762,44.8180163986649,51.4963466726773,40.5768508913488,29.4901579171555,6.35030673459631,5.53558308826113,15.8481681015439,22.2415747208481,18.7845149255096,23.8878146826972,77.009820055591,38.2854318816662,54.9699931172488,124.705075462575,85.3806856198057,71.8555322486107,103.738978011876,113.035278309759,164.090796432543,95.4517440104608,59.084817379101,107.865915722626,135.128779856627,69.7132379694305,80.5014360443841,20.4694779390438,23.9369506863744,21.1739093459752,201.176878980111,157.879925406255,257.320374046444,5.46254444320914,5.81890077199236,10.1413024560989,67.7689064138264,83.5937108344471,29.2467408116455,30.6548572395762,23.4458437932213,37.1504137042822,45.3377600279434,3.52544681848824,2.70011876663381,2.52389953621658,21.4238238302853,21.4242484723065,2.57230678351403,2.87536413054709,3.67687514644008,7.70811166995721,21.7068474744819,20.1224558565679,7.64940468835124,7.77644970620482,9.37644067002168,13.959149950069,15.757353080887,19.8637722109853,27.9897156199984,33.0302299453919,10.2519695203915,19.1587269132956,24.0317561139578,114.786337525864,50.7650087419018,116.955069397733,38.318926606285,78.622946511168,48.3869038065122,212.913740919736,59.9914735474763,39.4874726996361,50.1742195804683,27.8869971157827,69.2962978037316,43.3168907501298,49.7746692207332,57.1536348269605,64.6067656961501,56.6187378416557,48.9848843994767,61.3682784243797,28.0555642832519,12.8379141806941,28.3152894830291,32.7474006103603,36.9270469353925,59.2647083963952,20.1066546127481,109.012980770859,99.0505594901395,163.652952110727,182.31123989073,129.633971336251,106.672555689749,54.0536107532554,18.1524094147159,18.431310199584,44.7049846615035,7.6681679683789,11.9980546198682,11.5633906636489,16.6267609739353,16.9275223042892,7.28795242254614,19.468323861535,10.7400492078739,22.2333207678729,19.3067103050632,22.6083387747702,93.0564140163496,28.5576717030052,77.0217192544495,21.9903548606969,17.012755728077,21.7875177064473,33.0043551060216,49.7346808796207,42.2775276940004,32.2333932485467,52.7754876307592,9.91612767491074,11.1572587299013,20.762232651346,27.837858018302,29.4730084179134,98.9036152922953,66.2618479233578,12.1410902759281,9.12877143507205,15.9555702411123,18.7547909601091,190.555710732662,154.08362140758,153.232814303324,162.880378082625,189.090426709255,211.500211768596,236.719555755915,266.127214188422,351.580445867547,255.561446915635,349.348363560315,438.420122023988,592.694749022297,729.34548299687,595.60808645853,19.5569652164638,12.3485534855141,79.3005079161115,54.2123661660266,28.7939138222566,25.5460339046482,29.2529137201152,34.2861991859682,42.0294502866805,48.8879859109277,45.5547899082731,56.3270425156117,33.9302531880364,32.2309484706664,41.3323864692535,56.625622745216,58.3572734661674,60.9372296158364,27.3121777372438,33.9318082450895,41.7018621990398,44.5996407981238,36.4630675875136,45.5882829287071,59.8850006566717,46.0543661696359,50.8675878206054,43.4358017004738,65.5160305862599,24.0256952231175,22.2111664477919,18.8884174403277,17.4459704394113,24.3588931349941,25.7172110299234,44.017509029974,36.3182907976079,39.2622820858956,40.2550978276593,42.4240680342094,57.7269695261937,51.0209333453166,64.5830688678884,43.9023604440664,57.4582421418141,25.2023577654745,23.9558515369778,15.9560380628677,17.8364588699262,34.0037702606886,39.5152443870783,51.3201493866011,44.610745782052,48.5007670330817,40.0231469330293,63.5789661097063,60.6124286349294,50.7718195621106,36.1899081454253,23.3879444042045,50.6517201209607,53.5317287831181,22.9587343682543,17.1129062424617,73.7707254195039,624.10813204921,47.957249351271,61.6893215988689,43.3001029442926,51.1393227618461,44.3369361423964,43.5937857414802,49.791716306012,63.1272653088434,45.8533822417967,17.6726724031994,33.0720398535266,19.4091507997308,29.971200521058,47.0164850471726,18.5843193675948,10.9251286269742,15.1161778482376,17.9174825768103,20.0805287158925,23.3650712437385,29.9776820075137,24.7202936044704,39.5712090007041,18.6461687182131,17.9211634577498,14.4389760547462,28.937366489072,16.5656206508805,10.0899773350549,13.9319072770535,23.9409315417069,25.6851097346982,24.6823530903181,14.6143175575008,86.8285319835728,102.526722298089,63.2916502417741,132.073888606126,137.083298264824,59.4082310542335,48.4651716652734,53.8382151163801,52.758031430003,35.2308073819968,18.9666677685616,26.2111322313293,30.5570970160024,17.5182665014363,18.3170265146174,19.9037010689675,6.62915876976036,7.41742697315387,6.90999869022119,55.3708958448766,11.0717597753397,37.614101418467,41.6900615572153,48.7175729713712,56.7742665740062,55.698975056931,58.5186466535378,82.9766336089374,30.4595187235713,65.8619671872141,7.89170114157866,13.0079395058262,11.4166358415397,9.13920585217024,10.2036260547408,11.8269287843545,12.0877955805127,10.2861464026721,15.4143236305795,14.4950472495604,72.2955315707242,12.6404448251271,6.08175645870493,8.11416561602135,8.31493267057888,9.13036147904155,11.1261558677508,9.01465871399766,11.0767145380933,7.97634954590366,5.41068327250499,9.98179232854721,10.0381617161945,8.46664206434899,8.88264456579924,176.169508069019,17.7588762699252,18.3913406049425,30.8907694109904,74.7643728904577,68.1287385887791,49.4509385521616,66.6685658935895,51.6619267156424,15.2482997506608,15.1907328047368,13.7494923225455,11.5141632170271,10.9613203163303,10.5755145634558,8.77529250301348,11.2580300806055,16.7662691324156,8.80192529978094,13.3885678383588,10.7736715818278,14.6830900948555,48.1351299795222,28.7170032800336,49.6377472815038,147.349580532471,139.485733750731,134.786068028562,142.521227434782,144.736680237327,144.487777501734,139.151280100245,129.074707248216,132.561062349555,138.601464163374,117.043169204304,135.615181985985,139.285034471518,150.731694217623,132.690400673156,145.885112662975,135.670192080026,128.776925136243,135.517507798076,116.852773498405,122.378813851885,134.1655528333,141.236278399696,148.702701989301,120.414543396037,115.053235414658,117.449309389701,127.51302029605,104.74828976276,45.7153357626441,165.857510387795,173.615811671025,371.673229209763,174.487812523537,209.14478772962 | ||
|short_description=p1@Pdlim5 | |short_description=p1@Pdlim5 | ||
}} | }} |
Revision as of 07:07, 14 November 2012
Short description: | p1@Pdlim5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pdlim5_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 0bp_to_ENSMUST00000168967, ENSMUST00000170361_5end |
EntrezGene: | Pdlim5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 2.33e-14 | 23 |
circulatory system | 2.33e-14 | 23 |
primary circulatory organ | 1.21e-12 | 18 |
heart | 1.21e-12 | 18 |
primitive heart tube | 1.21e-12 | 18 |
primary heart field | 1.21e-12 | 18 |
anterior lateral plate mesoderm | 1.21e-12 | 18 |
heart tube | 1.21e-12 | 18 |
heart primordium | 1.21e-12 | 18 |
cardiac mesoderm | 1.21e-12 | 18 |
cardiogenic plate | 1.21e-12 | 18 |
heart rudiment | 1.21e-12 | 18 |
splanchnic layer of lateral plate mesoderm | 2.22e-10 | 33 |
epithelial tube | 8.54e-10 | 47 |
compound organ | 2.54e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.