FFCP PHASE1:Mm9::chr11:67466144..67466155,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:67466144..67466155,+ | |id=chr11:67466144..67466155,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.50e-10!23;CL:0000337!1.50e-10!23;CL:0002614!1.89e-09!3;CL:0000540!8.81e-07!33;CL:0000047!8.81e-07!33;CL:0000031!8.81e-07!33;CL:0000404!8.81e-07!33 | |ontology_enrichment_celltype=CL:0000117!1.50e-10!23;CL:0000337!1.50e-10!23;CL:0002614!1.89e-09!3;CL:0000540!8.81e-07!33;CL:0000047!8.81e-07!33;CL:0000031!8.81e-07!33;CL:0000404!8.81e-07!33 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.34e-18!63;UBERON:0002346!1.09e-17!71;UBERON:0003075!1.09e-17!71;UBERON:0007284!1.09e-17!71;UBERON:0001049!1.30e-17!52;UBERON:0005068!1.30e-17!52;UBERON:0006241!1.30e-17!52;UBERON:0007135!1.30e-17!52;UBERON:0002298!3.04e-17!6;UBERON:0000955!1.96e-16!50;UBERON:0006238!1.96e-16!50;UBERON:0001017!9.13e-16!73;UBERON:0005743!9.13e-16!73;UBERON:0000073!3.28e-15!75;UBERON:0001016!3.28e-15!75;UBERON:0002616!7.59e-15!49;UBERON:0004121!1.35e-14!102;UBERON:0000924!1.35e-14!102;UBERON:0006601!1.35e-14!102;UBERON:0003076!1.80e-14!12;UBERON:0003057!1.80e-14!12;UBERON:0002420!2.26e-12!8;UBERON:0007245!2.26e-12!8;UBERON:0010009!2.26e-12!8;UBERON:0010011!2.26e-12!8;UBERON:0000454!2.26e-12!8;UBERON:0007811!2.75e-12!86;UBERON:0002950!3.25e-12!4;UBERON:0001891!3.25e-12!4;UBERON:0009616!3.25e-12!4;UBERON:0000153!8.11e-11!94;UBERON:0003056!8.17e-11!49;UBERON:0002020!1.49e-09!34;UBERON:0002038!1.89e-09!3;UBERON:0002308!1.89e-09!3;UBERON:0009663!1.89e-09!3;UBERON:0009661!1.89e-09!3;UBERON:0006331!1.89e-09!3;UBERON:0000125!1.89e-09!3;UBERON:0004733!3.02e-08!6;UBERON:0004732!3.02e-08!6;UBERON:0002028!3.02e-08!6;UBERON:0007277!3.02e-08!6;UBERON:0002240!9.65e-08!6;UBERON:0005174!9.65e-08!6;UBERON:0001137!9.65e-08!6;UBERON:0003080!1.18e-07!40 | |ontology_enrichment_uberon=UBERON:0000033!1.34e-18!63;UBERON:0002346!1.09e-17!71;UBERON:0003075!1.09e-17!71;UBERON:0007284!1.09e-17!71;UBERON:0001049!1.30e-17!52;UBERON:0005068!1.30e-17!52;UBERON:0006241!1.30e-17!52;UBERON:0007135!1.30e-17!52;UBERON:0002298!3.04e-17!6;UBERON:0000955!1.96e-16!50;UBERON:0006238!1.96e-16!50;UBERON:0001017!9.13e-16!73;UBERON:0005743!9.13e-16!73;UBERON:0000073!3.28e-15!75;UBERON:0001016!3.28e-15!75;UBERON:0002616!7.59e-15!49;UBERON:0004121!1.35e-14!102;UBERON:0000924!1.35e-14!102;UBERON:0006601!1.35e-14!102;UBERON:0003076!1.80e-14!12;UBERON:0003057!1.80e-14!12;UBERON:0002420!2.26e-12!8;UBERON:0007245!2.26e-12!8;UBERON:0010009!2.26e-12!8;UBERON:0010011!2.26e-12!8;UBERON:0000454!2.26e-12!8;UBERON:0007811!2.75e-12!86;UBERON:0002950!3.25e-12!4;UBERON:0001891!3.25e-12!4;UBERON:0009616!3.25e-12!4;UBERON:0000153!8.11e-11!94;UBERON:0003056!8.17e-11!49;UBERON:0002020!1.49e-09!34;UBERON:0002038!1.89e-09!3;UBERON:0002308!1.89e-09!3;UBERON:0009663!1.89e-09!3;UBERON:0009661!1.89e-09!3;UBERON:0006331!1.89e-09!3;UBERON:0000125!1.89e-09!3;UBERON:0004733!3.02e-08!6;UBERON:0004732!3.02e-08!6;UBERON:0002028!3.02e-08!6;UBERON:0007277!3.02e-08!6;UBERON:0002240!9.65e-08!6;UBERON:0005174!9.65e-08!6;UBERON:0001137!9.65e-08!6;UBERON:0003080!1.18e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.06e-16,4;UBERON:0002680,8.06e-16,4;UBERON:0001895,8.06e-16,4;UBERON:0010092,8.06e-16,4;UBERON:0006215,8.06e-16,4;UBERON:0002259,1.33e-15,1;UBERON:0002314,1.33e-15,1;UBERON:0004061,1.33e-15,1;UBERON:0006777,1.33e-15,1;UBERON:0005882,1.33e-15,1;UBERON:0001851,1.86e-15,1;UBERON:0005889,1.86e-15,1;UBERON:0002950,1.87e-15,4;UBERON:0001891,1.87e-15,4;UBERON:0009616,1.87e-15,4;UBERON:0010286,1.87e-15,4;UBERON:0004733,6.82e-11,6;UBERON:0004732,6.82e-11,6;UBERON:0002028,6.82e-11,6;UBERON:0007277,6.82e-11,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0.274462930807229,0,2.23346399201105,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.737971008739,28.065858713003,0,0,0,0,1.19832511523858,0.457500602818626,0,0.695297280769106,1.02286182932132,0,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0.274462930807229,0,2.23346399201105,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.737971008739,28.065858713003,0,0,0,0,1.19832511523858,0.457500602818626,0,0.695297280769106,1.02286182932132,0,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p19@Gas7 | |short_description=p19@Gas7 | ||
}} | }} |
Revision as of 16:34, 14 November 2012
Short description: | p19@Gas7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Gas7_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 65bp_to_ENSMUST00000140863, uc007jmx.2_5end |
EntrezGene: | Gas7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.06e-16 | 4 |
regional part of metencephalon | 8.06e-16 | 4 |
metencephalon | 8.06e-16 | 4 |
future metencephalon | 8.06e-16 | 4 |
rhombic lip | 8.06e-16 | 4 |
corpora quadrigemina | 1.33e-15 | 1 |
midbrain tectum | 1.33e-15 | 1 |
neural tube mantle layer | 1.33e-15 | 1 |
tectal plate | 1.33e-15 | 1 |
neural tube alar plate | 1.33e-15 | 1 |
cortex | 1.86e-15 | 1 |
zygote cortex | 1.86e-15 | 1 |
regional part of midbrain | 1.87e-15 | 4 |
midbrain | 1.87e-15 | 4 |
presumptive midbrain | 1.87e-15 | 4 |
midbrain neural tube | 1.87e-15 | 4 |
segmental subdivision of hindbrain | 6.82e-11 | 6 |
segmental subdivision of nervous system | 6.82e-11 | 6 |
hindbrain | 6.82e-11 | 6 |
presumptive hindbrain | 6.82e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.