FFCP PHASE1:Mm9::chr1:195128260..195128276,+: Difference between revisions
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|id=chr1:195128260..195128276,+ | |id=chr1:195128260..195128276,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.45e-08,15;CL:0000066,2.54e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.11e-13!130;UBERON:0000925!1.11e-13!130;UBERON:0006595!1.11e-13!130;UBERON:0001007!1.28e-13!128;UBERON:0001555!1.28e-13!128;UBERON:0007026!1.28e-13!128;UBERON:0004921!1.84e-12!126;UBERON:0004185!1.84e-12!126;UBERON:0005409!1.05e-08!59;UBERON:0000344!2.13e-08!15;UBERON:0001004!3.49e-08!42;UBERON:0005178!6.65e-08!17;UBERON:0005181!6.65e-08!17;UBERON:0002224!6.65e-08!17;UBERON:0000915!6.65e-08!17;UBERON:0008947!6.65e-08!17;UBERON:0003258!6.65e-08!17;UBERON:0000065!9.55e-08!41;UBERON:0000160!5.41e-07!43;UBERON:0001242!6.56e-07!13;UBERON:0000060!6.56e-07!13;UBERON:0001262!6.56e-07!13;UBERON:0004786!6.56e-07!13;UBERON:0005153!6.78e-07!17 | |ontology_enrichment_uberon=UBERON:0004119!1.11e-13!130;UBERON:0000925!1.11e-13!130;UBERON:0006595!1.11e-13!130;UBERON:0001007!1.28e-13!128;UBERON:0001555!1.28e-13!128;UBERON:0007026!1.28e-13!128;UBERON:0004921!1.84e-12!126;UBERON:0004185!1.84e-12!126;UBERON:0005409!1.05e-08!59;UBERON:0000344!2.13e-08!15;UBERON:0001004!3.49e-08!42;UBERON:0005178!6.65e-08!17;UBERON:0005181!6.65e-08!17;UBERON:0002224!6.65e-08!17;UBERON:0000915!6.65e-08!17;UBERON:0008947!6.65e-08!17;UBERON:0003258!6.65e-08!17;UBERON:0000065!9.55e-08!41;UBERON:0000160!5.41e-07!43;UBERON:0001242!6.56e-07!13;UBERON:0000060!6.56e-07!13;UBERON:0001262!6.56e-07!13;UBERON:0004786!6.56e-07!13;UBERON:0005153!6.78e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.31e-11,116;UBERON:0001555,1.31e-11,116;UBERON:0007026,1.31e-11,116;UBERON:0004119,4.08e-11,118;UBERON:0000925,4.08e-11,118;UBERON:0006595,4.08e-11,118;UBERON:0004921,2.42e-10,114;UBERON:0000344,3.54e-10,15;UBERON:0001004,6.63e-09,42;UBERON:0000065,2.36e-08,41;UBERON:0001242,3.37e-08,13;UBERON:0001262,3.37e-08,13;UBERON:0004786,3.37e-08,13;UBERON:0005178,3.40e-07,17;UBERON:0005181,3.40e-07,17;UBERON:0002224,3.40e-07,17;UBERON:0000915,3.40e-07,17;UBERON:0008947,3.40e-07,17;UBERON:0003258,3.40e-07,17;UBERON:0005409,9.60e-07,47 | |||
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| ||
|short_description=p1@Lamb3 | |short_description=p1@Lamb3 | ||
}} | }} |
Revision as of 00:46, 14 November 2012
Short description: | p1@Lamb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lamb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:661 |
Association with transcript: | 72bp_to_NM_008484, uc007eek.1_5end |
EntrezGene: | Lamb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.45e-08 | 15 |
epithelial cell | 2.54e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.31e-11 | 116 |
digestive tract | 1.31e-11 | 116 |
primitive gut | 1.31e-11 | 116 |
endoderm-derived structure | 4.08e-11 | 118 |
endoderm | 4.08e-11 | 118 |
presumptive endoderm | 4.08e-11 | 118 |
subdivision of digestive tract | 2.42e-10 | 114 |
mucosa | 3.54e-10 | 15 |
respiratory system | 6.63e-09 | 42 |
respiratory tract | 2.36e-08 | 41 |
intestinal mucosa | 3.37e-08 | 13 |
wall of intestine | 3.37e-08 | 13 |
gastrointestinal system mucosa | 3.37e-08 | 13 |
thoracic cavity element | 3.40e-07 | 17 |
thoracic segment organ | 3.40e-07 | 17 |
thoracic cavity | 3.40e-07 | 17 |
thoracic segment of trunk | 3.40e-07 | 17 |
respiratory primordium | 3.40e-07 | 17 |
endoderm of foregut | 3.40e-07 | 17 |
gastrointestinal system | 9.60e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.