FFCP PHASE1:Mm9::chr19:4003290..4003333,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr19:4003290..4003333,+ | |id=chr19:4003290..4003333,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.95e-14!18;UBERON:0000948!1.95e-14!18;UBERON:0005498!1.95e-14!18;UBERON:0004140!1.95e-14!18;UBERON:0009881!1.95e-14!18;UBERON:0004141!1.95e-14!18;UBERON:0003084!1.95e-14!18;UBERON:0007005!1.95e-14!18;UBERON:0004139!1.95e-14!18;UBERON:0004291!1.95e-14!18;UBERON:0004535!4.82e-11!23;UBERON:0001009!4.82e-11!23;UBERON:0000025!9.04e-09!114;UBERON:0002048!8.62e-08!14;UBERON:0000117!8.62e-08!14;UBERON:0000171!8.62e-08!14;UBERON:0000170!8.62e-08!14;UBERON:0005597!8.62e-08!14;UBERON:0000118!8.62e-08!14;UBERON:0004111!8.72e-08!122 | |ontology_enrichment_uberon=UBERON:0007100!1.95e-14!18;UBERON:0000948!1.95e-14!18;UBERON:0005498!1.95e-14!18;UBERON:0004140!1.95e-14!18;UBERON:0009881!1.95e-14!18;UBERON:0004141!1.95e-14!18;UBERON:0003084!1.95e-14!18;UBERON:0007005!1.95e-14!18;UBERON:0004139!1.95e-14!18;UBERON:0004291!1.95e-14!18;UBERON:0004535!4.82e-11!23;UBERON:0001009!4.82e-11!23;UBERON:0000025!9.04e-09!114;UBERON:0002048!8.62e-08!14;UBERON:0000117!8.62e-08!14;UBERON:0000171!8.62e-08!14;UBERON:0000170!8.62e-08!14;UBERON:0005597!8.62e-08!14;UBERON:0000118!8.62e-08!14;UBERON:0004111!8.72e-08!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.94e-37,18;UBERON:0000948,3.94e-37,18;UBERON:0005498,3.94e-37,18;UBERON:0004140,3.94e-37,18;UBERON:0009881,3.94e-37,18;UBERON:0004141,3.94e-37,18;UBERON:0003084,3.94e-37,18;UBERON:0007005,3.94e-37,18;UBERON:0004139,3.94e-37,18;UBERON:0004291,3.94e-37,18;UBERON:0004535,3.16e-28,23;UBERON:0001009,3.16e-28,23;UBERON:0004872,1.63e-18,33;UBERON:0000025,9.69e-14,114;UBERON:0003914,1.54e-13,47;UBERON:0003103,2.49e-13,43;UBERON:0010314,6.33e-13,92;UBERON:0004111,1.97e-12,122;UBERON:0000483,1.38e-07,174;UBERON:0000119,1.99e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,2.06268836910977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.921639199537461,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,1.75668478206928,0.628340120440365,0,0,0,0,0.898743836428936,2.28750301409313,0,0.695297280769106,0.767146371990992,1.0389402227978,1.29793010454206,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,26.7192246570797,34.24080475724,35.832350230742,40.7200945206562,40.1399032764704,46.7429352048756,38.8331687733181,51.5084930687269,39.4666857201033,74.8747317106336,56.6377751072879,61.6933640643962,91.521192128258,58.8394308980016,66.2979708676236,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.814605311381257,0,0,0,0,0,0,0,1.50160595144485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,1.32643988239339,1.14075483509418,0.678980343100753,0.234690248288502,0.670025029767263,0,0.780534591431195,1.10344600874334,0.664394068946325,0.637819074629948,1.14704320301017,0.518054945597687,0.144649058581512,0,0,0,0,1.28440471990234,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,141.702700542017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,1.522324745573,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0,0.295379054349154,0,0,0,0,0,0,0.906921534460845,0,0,0.167884616364078,0,0,0,0,0,1.12950368523413,0,0,0.171853182343688,0.685082519770642,0,0,0,0.906284817968409,0,0.726511433089237,0,0.682934423016537,0.729320151204882,0.419226325255965,0.551530525350042,0.222246727801615,0.618105171716683,0,0.505394423527595,0.25347929989024,0.565879024158229,0.749132059759059,0.320125762024346,0.402048282689293,0.476293691283074,0.347652977834566,0.38581844092741,0,1.03039244094078,0.685738504770831,0.354951612318675,0.476872379894642,0.581385666529314,0.376437521661322,0.592302255241736,0.73171189149109,0.526139422875686,0.679020569229309,0,0.355905054372522,0.492522411877817,0.818462086339379,0.309873682371932,0.771626443924566,0.249810577937946,1.40358965067245,0.859484216193193,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,2.06268836910977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.921639199537461,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,1.75668478206928,0.628340120440365,0,0,0,0,0.898743836428936,2.28750301409313,0,0.695297280769106,0.767146371990992,1.0389402227978,1.29793010454206,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,26.7192246570797,34.24080475724,35.832350230742,40.7200945206562,40.1399032764704,46.7429352048756,38.8331687733181,51.5084930687269,39.4666857201033,74.8747317106336,56.6377751072879,61.6933640643962,91.521192128258,58.8394308980016,66.2979708676236,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.814605311381257,0,0,0,0,0,0,0,1.50160595144485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,1.32643988239339,1.14075483509418,0.678980343100753,0.234690248288502,0.670025029767263,0,0.780534591431195,1.10344600874334,0.664394068946325,0.637819074629948,1.14704320301017,0.518054945597687,0.144649058581512,0,0,0,0,1.28440471990234,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,141.702700542017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,1.522324745573,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0,0.295379054349154,0,0,0,0,0,0,0.906921534460845,0,0,0.167884616364078,0,0,0,0,0,1.12950368523413,0,0,0.171853182343688,0.685082519770642,0,0,0,0.906284817968409,0,0.726511433089237,0,0.682934423016537,0.729320151204882,0.419226325255965,0.551530525350042,0.222246727801615,0.618105171716683,0,0.505394423527595,0.25347929989024,0.565879024158229,0.749132059759059,0.320125762024346,0.402048282689293,0.476293691283074,0.347652977834566,0.38581844092741,0,1.03039244094078,0.685738504770831,0.354951612318675,0.476872379894642,0.581385666529314,0.376437521661322,0.592302255241736,0.73171189149109,0.526139422875686,0.679020569229309,0,0.355905054372522,0.492522411877817,0.818462086339379,0.309873682371932,0.771626443924566,0.249810577937946,1.40358965067245,0.859484216193193,0.191288332068843,0,0 | ||
|short_description=p1@Doc2g | |short_description=p1@Doc2g | ||
}} | }} |
Revision as of 16:25, 13 November 2012
Short description: | p1@Doc2g |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Doc2g_5end |
Coexpression cluster: | MCL_coexpression_mm9:1419 |
Association with transcript: | 0bp_to_ENSMUST00000138917, ENSMUST00000147806_5end |
EntrezGene: | Doc2g |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.94e-37 | 18 |
heart | 3.94e-37 | 18 |
primitive heart tube | 3.94e-37 | 18 |
primary heart field | 3.94e-37 | 18 |
anterior lateral plate mesoderm | 3.94e-37 | 18 |
heart tube | 3.94e-37 | 18 |
heart primordium | 3.94e-37 | 18 |
cardiac mesoderm | 3.94e-37 | 18 |
cardiogenic plate | 3.94e-37 | 18 |
heart rudiment | 3.94e-37 | 18 |
cardiovascular system | 3.16e-28 | 23 |
circulatory system | 3.16e-28 | 23 |
splanchnic layer of lateral plate mesoderm | 1.63e-18 | 33 |
tube | 9.69e-14 | 114 |
epithelial tube | 1.54e-13 | 47 |
compound organ | 2.49e-13 | 43 |
structure with developmental contribution from neural crest | 6.33e-13 | 92 |
anatomical conduit | 1.97e-12 | 122 |
epithelium | 1.38e-07 | 174 |
cell layer | 1.99e-07 | 176 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.