FFCP PHASE1:Mm9::chrX:7553714..7553733,-: Difference between revisions
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|id=chrX:7553714..7553733,- | |id=chrX:7553714..7553733,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!2.47e-38!17;UBERON:0009196!2.47e-38!17;UBERON:0009117!2.47e-38!17;UBERON:0003133!1.16e-36!24;UBERON:0000991!4.14e-36!18;UBERON:0005564!4.14e-36!18;UBERON:0005156!1.09e-33!26;UBERON:0000990!1.09e-33!26;UBERON:0000473!2.85e-32!14;UBERON:0003135!4.96e-30!15;UBERON:0003101!4.53e-28!16;UBERON:0000079!4.53e-28!16;UBERON:0002323!1.18e-16!37;UBERON:0004458!1.18e-16!37;UBERON:0003886!3.62e-16!38;UBERON:0002553!1.05e-15!39;UBERON:0005631!6.38e-15!3;UBERON:0000478!6.38e-15!3;UBERON:0000158!6.38e-15!3;UBERON:0001987!1.44e-10!2;UBERON:0003124!1.44e-10!2;UBERON:0004340!1.44e-10!2;UBERON:0000464!3.74e-10!57;UBERON:0003134!6.75e-10!8;UBERON:0000474!8.22e-09!9;UBERON:0000992!2.04e-07!3;UBERON:0003100!3.15e-07!11;UBERON:0004871!5.92e-07!3;UBERON:0000466!8.60e-07!79 | |ontology_enrichment_uberon=UBERON:0004176!2.47e-38!17;UBERON:0009196!2.47e-38!17;UBERON:0009117!2.47e-38!17;UBERON:0003133!1.16e-36!24;UBERON:0000991!4.14e-36!18;UBERON:0005564!4.14e-36!18;UBERON:0005156!1.09e-33!26;UBERON:0000990!1.09e-33!26;UBERON:0000473!2.85e-32!14;UBERON:0003135!4.96e-30!15;UBERON:0003101!4.53e-28!16;UBERON:0000079!4.53e-28!16;UBERON:0002323!1.18e-16!37;UBERON:0004458!1.18e-16!37;UBERON:0003886!3.62e-16!38;UBERON:0002553!1.05e-15!39;UBERON:0005631!6.38e-15!3;UBERON:0000478!6.38e-15!3;UBERON:0000158!6.38e-15!3;UBERON:0001987!1.44e-10!2;UBERON:0003124!1.44e-10!2;UBERON:0004340!1.44e-10!2;UBERON:0000464!3.74e-10!57;UBERON:0003134!6.75e-10!8;UBERON:0000474!8.22e-09!9;UBERON:0000992!2.04e-07!3;UBERON:0003100!3.15e-07!11;UBERON:0004871!5.92e-07!3;UBERON:0000466!8.60e-07!79 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.26e-20,14;UBERON:0003135,2.63e-19,15;UBERON:0003133,9.72e-19,24;UBERON:0003101,3.78e-18,16;UBERON:0000079,3.78e-18,16;UBERON:0005156,2.36e-17,26;UBERON:0000990,2.36e-17,26;UBERON:0004176,3.97e-17,17;UBERON:0009196,3.97e-17,17;UBERON:0009117,3.97e-17,17;UBERON:0000991,3.22e-16,18;UBERON:0005564,3.22e-16,18;UBERON:0001987,7.56e-10,2;UBERON:0003124,7.56e-10,2;UBERON:0004340,7.56e-10,2;UBERON:0002323,3.11e-08,37;UBERON:0004458,3.11e-08,37;UBERON:0003886,4.95e-08,38;UBERON:0002553,7.68e-08,39;UBERON:0005631,5.46e-07,3;UBERON:0000478,5.46e-07,3;UBERON:0000158,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.27099242518292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69107881605257,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,5.45268591013696,3.8653459332161,2.59227005632079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.27099242518292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69107881605257,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,5.45268591013696,3.8653459332161,2.59227005632079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p6@Gata1 | |short_description=p6@Gata1 | ||
}} | }} |
Revision as of 05:58, 14 November 2012
Short description: | p6@Gata1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gata1_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | -14bp_to_uc009snm.1_5end |
EntrezGene: | Gata1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.26e-20 | 14 |
male reproductive organ | 2.63e-19 | 15 |
reproductive organ | 9.72e-19 | 24 |
male organism | 3.78e-18 | 16 |
male reproductive system | 3.78e-18 | 16 |
reproductive structure | 2.36e-17 | 26 |
reproductive system | 2.36e-17 | 26 |
external genitalia | 3.97e-17 | 17 |
indifferent external genitalia | 3.97e-17 | 17 |
indifferent gonad | 3.97e-17 | 17 |
gonad | 3.22e-16 | 18 |
gonad primordium | 3.22e-16 | 18 |
placenta | 7.56e-10 | 2 |
chorion | 7.56e-10 | 2 |
allantois | 7.56e-10 | 2 |
body cavity | 3.11e-08 | 37 |
body cavity or lining | 3.11e-08 | 37 |
body cavity precursor | 4.95e-08 | 38 |
anatomical cavity | 7.68e-08 | 39 |
extraembryonic membrane | 5.46e-07 | 3 |
extraembryonic structure | 5.46e-07 | 3 |
membranous layer | 5.46e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.