FFCP PHASE1:Mm9::chr7:112782039..112782115,-: Difference between revisions
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|id=chr7:112782039..112782115,- | |id=chr7:112782039..112782115,- | ||
|ontology_enrichment_celltype=CL:0000055!1.43e-18!50;CL:0002319!5.27e-17!43;CL:0000221!1.39e-16!44;CL:0000133!1.39e-16!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000540!3.06e-13!33;CL:0000047!3.06e-13!33;CL:0000031!3.06e-13!33;CL:0000404!3.06e-13!33;CL:0000117!2.11e-12!23;CL:0000337!2.11e-12!23;CL:0002321!9.95e-09!70;CL:0000220!9.95e-09!70 | |ontology_enrichment_celltype=CL:0000055!1.43e-18!50;CL:0002319!5.27e-17!43;CL:0000221!1.39e-16!44;CL:0000133!1.39e-16!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000540!3.06e-13!33;CL:0000047!3.06e-13!33;CL:0000031!3.06e-13!33;CL:0000404!3.06e-13!33;CL:0000117!2.11e-12!23;CL:0000337!2.11e-12!23;CL:0002321!9.95e-09!70;CL:0000220!9.95e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.27e-17,43;CL:0000221,1.39e-16,44;CL:0000133,1.39e-16,44;CL:0000393,1.54e-14,39;CL:0000211,1.54e-14,39;CL:0000540,3.06e-13,33;CL:0000047,3.06e-13,33;CL:0000031,3.06e-13,33;CL:0000404,3.06e-13,33;CL:0000117,2.11e-12,23;CL:0000337,2.11e-12,23;CL:0002321,9.88e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.15e-29!75;UBERON:0001016!6.15e-29!75;UBERON:0001017!3.35e-28!73;UBERON:0005743!3.35e-28!73;UBERON:0004121!2.98e-23!102;UBERON:0000924!2.98e-23!102;UBERON:0006601!2.98e-23!102;UBERON:0001049!9.00e-21!52;UBERON:0005068!9.00e-21!52;UBERON:0006241!9.00e-21!52;UBERON:0007135!9.00e-21!52;UBERON:0000955!4.22e-19!50;UBERON:0006238!4.22e-19!50;UBERON:0002616!1.02e-18!49;UBERON:0002020!1.49e-17!34;UBERON:0002346!2.52e-17!71;UBERON:0003075!2.52e-17!71;UBERON:0007284!2.52e-17!71;UBERON:0000033!2.81e-17!63;UBERON:0000025!1.79e-14!114;UBERON:0002791!2.92e-14!29;UBERON:0003528!2.92e-14!29;UBERON:0001893!2.92e-14!29;UBERON:0004111!3.25e-14!122;UBERON:0003080!1.23e-13!40;UBERON:0002780!2.98e-13!39;UBERON:0001890!2.98e-13!39;UBERON:0006240!2.98e-13!39;UBERON:0003056!4.92e-13!49;UBERON:0000956!9.80e-10!21;UBERON:0001869!9.80e-10!21;UBERON:0000203!9.80e-10!21;UBERON:0002619!1.87e-08!17;UBERON:0003076!3.54e-08!12;UBERON:0003057!3.54e-08!12 | |ontology_enrichment_uberon=UBERON:0000073!6.15e-29!75;UBERON:0001016!6.15e-29!75;UBERON:0001017!3.35e-28!73;UBERON:0005743!3.35e-28!73;UBERON:0004121!2.98e-23!102;UBERON:0000924!2.98e-23!102;UBERON:0006601!2.98e-23!102;UBERON:0001049!9.00e-21!52;UBERON:0005068!9.00e-21!52;UBERON:0006241!9.00e-21!52;UBERON:0007135!9.00e-21!52;UBERON:0000955!4.22e-19!50;UBERON:0006238!4.22e-19!50;UBERON:0002616!1.02e-18!49;UBERON:0002020!1.49e-17!34;UBERON:0002346!2.52e-17!71;UBERON:0003075!2.52e-17!71;UBERON:0007284!2.52e-17!71;UBERON:0000033!2.81e-17!63;UBERON:0000025!1.79e-14!114;UBERON:0002791!2.92e-14!29;UBERON:0003528!2.92e-14!29;UBERON:0001893!2.92e-14!29;UBERON:0004111!3.25e-14!122;UBERON:0003080!1.23e-13!40;UBERON:0002780!2.98e-13!39;UBERON:0001890!2.98e-13!39;UBERON:0006240!2.98e-13!39;UBERON:0003056!4.92e-13!49;UBERON:0000956!9.80e-10!21;UBERON:0001869!9.80e-10!21;UBERON:0000203!9.80e-10!21;UBERON:0002619!1.87e-08!17;UBERON:0003076!3.54e-08!12;UBERON:0003057!3.54e-08!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.14e-29,75;UBERON:0001017,3.35e-28,73;UBERON:0004121,5.84e-26,95;UBERON:0000924,5.84e-26,95;UBERON:0006601,5.84e-26,95;UBERON:0000073,4.17e-22,54;UBERON:0001049,8.99e-21,52;UBERON:0005068,8.99e-21,52;UBERON:0006241,8.99e-21,52;UBERON:0007135,8.99e-21,52;UBERON:0002346,2.39e-20,64;UBERON:0003075,2.39e-20,64;UBERON:0007284,2.39e-20,64;UBERON:0010371,9.13e-18,73;UBERON:0002020,1.49e-17,34;UBERON:0000955,2.78e-17,47;UBERON:0006238,2.78e-17,47;UBERON:0002616,6.58e-17,46;UBERON:0010314,1.07e-16,92;UBERON:0000025,1.79e-14,114;UBERON:0003528,2.92e-14,29;UBERON:0002791,2.92e-14,29;UBERON:0001893,2.92e-14,29;UBERON:0004111,3.24e-14,122;UBERON:0003080,1.23e-13,40;UBERON:0002780,2.98e-13,39;UBERON:0001890,2.98e-13,39;UBERON:0006240,2.98e-13,39;UBERON:0003056,4.92e-13,49;UBERON:0000956,9.80e-10,21;UBERON:0001869,9.80e-10,21;UBERON:0000203,9.80e-10,21;UBERON:0002619,1.87e-08,17;UBERON:0003076,3.54e-08,12;UBERON:0003057,3.54e-08,12 | |||
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| ||
|short_description=p1@Trim3 | |short_description=p1@Trim3 | ||
}} | }} |
Revision as of 11:34, 13 November 2012
Short description: | p1@Trim3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1083 |
Association with transcript: | 0bp_to_ENSMUST00000057525, ENSMUST00000106789, ENSMUST00000106792, ENSMUST00000140882, ENSMUST00000153371_5end |
EntrezGene: | Trim3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.27e-17 | 43 |
ectodermal cell | 1.39e-16 | 44 |
neurectodermal cell | 1.39e-16 | 44 |
electrically responsive cell | 1.54e-14 | 39 |
electrically active cell | 1.54e-14 | 39 |
neuron | 3.06e-13 | 33 |
neuronal stem cell | 3.06e-13 | 33 |
neuroblast | 3.06e-13 | 33 |
electrically signaling cell | 3.06e-13 | 33 |
CNS neuron (sensu Vertebrata) | 2.11e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.11e-12 | 23 |
embryonic cell | 9.88e-09 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.