FFCP PHASE1:Mm9::chr8:107813365..107813441,-: Difference between revisions
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|id=chr8:107813365..107813441,- | |id=chr8:107813365..107813441,- | ||
|ontology_enrichment_celltype=CL:0000117!7.32e-14!23;CL:0000337!7.32e-14!23;CL:0000540!5.71e-13!33;CL:0000047!5.71e-13!33;CL:0000031!5.71e-13!33;CL:0000404!5.71e-13!33;CL:0000221!4.05e-10!44;CL:0000133!4.05e-10!44;CL:0002319!6.53e-10!43;CL:0000393!3.02e-08!39;CL:0000211!3.02e-08!39 | |ontology_enrichment_celltype=CL:0000117!7.32e-14!23;CL:0000337!7.32e-14!23;CL:0000540!5.71e-13!33;CL:0000047!5.71e-13!33;CL:0000031!5.71e-13!33;CL:0000404!5.71e-13!33;CL:0000221!4.05e-10!44;CL:0000133!4.05e-10!44;CL:0002319!6.53e-10!43;CL:0000393!3.02e-08!39;CL:0000211!3.02e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.09e-14,23;CL:0000337,7.09e-14,23;CL:0000540,5.55e-13,33;CL:0000047,5.55e-13,33;CL:0000031,5.55e-13,33;CL:0000404,5.55e-13,33;CL:0000221,3.97e-10,44;CL:0000133,3.97e-10,44;CL:0002319,6.39e-10,43;CL:0000393,2.92e-08,39;CL:0000211,2.92e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.06e-22!73;UBERON:0005743!4.06e-22!73;UBERON:0000073!1.26e-20!75;UBERON:0001016!1.26e-20!75;UBERON:0002346!1.66e-20!71;UBERON:0003075!1.66e-20!71;UBERON:0007284!1.66e-20!71;UBERON:0000033!2.24e-20!63;UBERON:0004121!1.30e-19!102;UBERON:0000924!1.30e-19!102;UBERON:0006601!1.30e-19!102;UBERON:0001049!3.99e-19!52;UBERON:0005068!3.99e-19!52;UBERON:0006241!3.99e-19!52;UBERON:0007135!3.99e-19!52;UBERON:0003056!2.52e-18!49;UBERON:0000955!1.96e-17!50;UBERON:0006238!1.96e-17!50;UBERON:0002616!6.98e-17!49;UBERON:0000153!3.91e-16!94;UBERON:0003080!7.63e-15!40;UBERON:0007811!9.91e-15!86;UBERON:0002780!2.15e-14!39;UBERON:0001890!2.15e-14!39;UBERON:0006240!2.15e-14!39;UBERON:0002020!4.52e-14!34;UBERON:0002791!4.53e-11!29;UBERON:0003528!4.53e-11!29;UBERON:0001893!4.53e-11!29;UBERON:0000956!8.07e-08!21;UBERON:0001869!8.07e-08!21;UBERON:0000203!8.07e-08!21 | |ontology_enrichment_uberon=UBERON:0001017!4.06e-22!73;UBERON:0005743!4.06e-22!73;UBERON:0000073!1.26e-20!75;UBERON:0001016!1.26e-20!75;UBERON:0002346!1.66e-20!71;UBERON:0003075!1.66e-20!71;UBERON:0007284!1.66e-20!71;UBERON:0000033!2.24e-20!63;UBERON:0004121!1.30e-19!102;UBERON:0000924!1.30e-19!102;UBERON:0006601!1.30e-19!102;UBERON:0001049!3.99e-19!52;UBERON:0005068!3.99e-19!52;UBERON:0006241!3.99e-19!52;UBERON:0007135!3.99e-19!52;UBERON:0003056!2.52e-18!49;UBERON:0000955!1.96e-17!50;UBERON:0006238!1.96e-17!50;UBERON:0002616!6.98e-17!49;UBERON:0000153!3.91e-16!94;UBERON:0003080!7.63e-15!40;UBERON:0007811!9.91e-15!86;UBERON:0002780!2.15e-14!39;UBERON:0001890!2.15e-14!39;UBERON:0006240!2.15e-14!39;UBERON:0002020!4.52e-14!34;UBERON:0002791!4.53e-11!29;UBERON:0003528!4.53e-11!29;UBERON:0001893!4.53e-11!29;UBERON:0000956!8.07e-08!21;UBERON:0001869!8.07e-08!21;UBERON:0000203!8.07e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.44e-23,64;UBERON:0003075,4.44e-23,64;UBERON:0007284,4.44e-23,64;UBERON:0001017,3.86e-22,73;UBERON:0004121,3.40e-21,95;UBERON:0000924,3.40e-21,95;UBERON:0006601,3.40e-21,95;UBERON:0001016,1.20e-20,75;UBERON:0010371,2.28e-20,73;UBERON:0000073,4.46e-20,54;UBERON:0001049,3.81e-19,52;UBERON:0005068,3.81e-19,52;UBERON:0006241,3.81e-19,52;UBERON:0007135,3.81e-19,52;UBERON:0003056,2.42e-18,49;UBERON:0000955,1.60e-16,47;UBERON:0006238,1.60e-16,47;UBERON:0002616,5.61e-16,46;UBERON:0010314,1.86e-15,92;UBERON:0003080,7.38e-15,40;UBERON:0002780,2.08e-14,39;UBERON:0001890,2.08e-14,39;UBERON:0006240,2.08e-14,39;UBERON:0002020,4.38e-14,34;UBERON:0003528,4.42e-11,29;UBERON:0002791,4.42e-11,29;UBERON:0001893,4.42e-11,29;UBERON:0000956,7.95e-08,21;UBERON:0001869,7.95e-08,21;UBERON:0000203,7.95e-08,21 | |||
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| ||
|short_description=p1@4931428F04Rik | |short_description=p1@4931428F04Rik | ||
}} | }} |
Revision as of 04:11, 14 November 2012
Short description: | p1@4931428F04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_4931428F04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000014981, ENSMUST00000171788, NM_001166394, NM_028888, uc009nce.2, uc009ncg.2, uc009nch.2_5end |
EntrezGene: | 4931428F04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.09e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.09e-14 | 23 |
neuron | 5.55e-13 | 33 |
neuronal stem cell | 5.55e-13 | 33 |
neuroblast | 5.55e-13 | 33 |
electrically signaling cell | 5.55e-13 | 33 |
ectodermal cell | 3.97e-10 | 44 |
neurectodermal cell | 3.97e-10 | 44 |
neural cell | 6.39e-10 | 43 |
electrically responsive cell | 2.92e-08 | 39 |
electrically active cell | 2.92e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.44e-23 | 64 |
neural plate | 4.44e-23 | 64 |
presumptive neural plate | 4.44e-23 | 64 |
central nervous system | 3.86e-22 | 73 |
ectoderm-derived structure | 3.40e-21 | 95 |
ectoderm | 3.40e-21 | 95 |
presumptive ectoderm | 3.40e-21 | 95 |
nervous system | 1.20e-20 | 75 |
ecto-epithelium | 2.28e-20 | 73 |
regional part of nervous system | 4.46e-20 | 54 |
neural tube | 3.81e-19 | 52 |
neural rod | 3.81e-19 | 52 |
future spinal cord | 3.81e-19 | 52 |
neural keel | 3.81e-19 | 52 |
pre-chordal neural plate | 2.42e-18 | 49 |
brain | 1.60e-16 | 47 |
future brain | 1.60e-16 | 47 |
regional part of brain | 5.61e-16 | 46 |
structure with developmental contribution from neural crest | 1.86e-15 | 92 |
anterior neural tube | 7.38e-15 | 40 |
regional part of forebrain | 2.08e-14 | 39 |
forebrain | 2.08e-14 | 39 |
future forebrain | 2.08e-14 | 39 |
gray matter | 4.38e-14 | 34 |
brain grey matter | 4.42e-11 | 29 |
regional part of telencephalon | 4.42e-11 | 29 |
telencephalon | 4.42e-11 | 29 |
cerebral cortex | 7.95e-08 | 21 |
cerebral hemisphere | 7.95e-08 | 21 |
pallium | 7.95e-08 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.