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FFCP PHASE1:Mm9::chr4:120689585..120689613,-: Difference between revisions

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|id=chr4:120689585..120689613,-
|id=chr4:120689585..120689613,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,4.97e-09,23;CL:0000337,4.97e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.76e-16!52;UBERON:0005068!1.76e-16!52;UBERON:0006241!1.76e-16!52;UBERON:0007135!1.76e-16!52;UBERON:0000955!6.35e-16!50;UBERON:0006238!6.35e-16!50;UBERON:0002616!2.01e-15!49;UBERON:0001017!2.76e-15!73;UBERON:0005743!2.76e-15!73;UBERON:0000073!2.07e-14!75;UBERON:0001016!2.07e-14!75;UBERON:0002020!2.38e-13!34;UBERON:0000033!8.21e-13!63;UBERON:0003080!1.49e-11!40;UBERON:0002791!4.61e-11!29;UBERON:0003528!4.61e-11!29;UBERON:0001893!4.61e-11!29;UBERON:0002780!5.92e-11!39;UBERON:0001890!5.92e-11!39;UBERON:0006240!5.92e-11!39;UBERON:0002346!1.63e-10!71;UBERON:0003075!1.63e-10!71;UBERON:0007284!1.63e-10!71;UBERON:0003056!1.68e-09!49;UBERON:0007811!8.60e-09!86;UBERON:0004121!9.11e-09!102;UBERON:0000924!9.11e-09!102;UBERON:0006601!9.11e-09!102;UBERON:0002619!1.82e-07!17;UBERON:0000956!6.55e-07!21;UBERON:0001869!6.55e-07!21;UBERON:0000203!6.55e-07!21;UBERON:0000153!9.20e-07!94
|ontology_enrichment_uberon=UBERON:0001049!1.76e-16!52;UBERON:0005068!1.76e-16!52;UBERON:0006241!1.76e-16!52;UBERON:0007135!1.76e-16!52;UBERON:0000955!6.35e-16!50;UBERON:0006238!6.35e-16!50;UBERON:0002616!2.01e-15!49;UBERON:0001017!2.76e-15!73;UBERON:0005743!2.76e-15!73;UBERON:0000073!2.07e-14!75;UBERON:0001016!2.07e-14!75;UBERON:0002020!2.38e-13!34;UBERON:0000033!8.21e-13!63;UBERON:0003080!1.49e-11!40;UBERON:0002791!4.61e-11!29;UBERON:0003528!4.61e-11!29;UBERON:0001893!4.61e-11!29;UBERON:0002780!5.92e-11!39;UBERON:0001890!5.92e-11!39;UBERON:0006240!5.92e-11!39;UBERON:0002346!1.63e-10!71;UBERON:0003075!1.63e-10!71;UBERON:0007284!1.63e-10!71;UBERON:0003056!1.68e-09!49;UBERON:0007811!8.60e-09!86;UBERON:0004121!9.11e-09!102;UBERON:0000924!9.11e-09!102;UBERON:0006601!9.11e-09!102;UBERON:0002619!1.82e-07!17;UBERON:0000956!6.55e-07!21;UBERON:0001869!6.55e-07!21;UBERON:0000203!6.55e-07!21;UBERON:0000153!9.20e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.36e-26,54;UBERON:0001049,2.40e-23,52;UBERON:0005068,2.40e-23,52;UBERON:0006241,2.40e-23,52;UBERON:0007135,2.40e-23,52;UBERON:0001017,1.91e-21,73;UBERON:0001016,1.51e-20,75;UBERON:0000955,1.17e-18,47;UBERON:0006238,1.17e-18,47;UBERON:0002346,4.74e-18,64;UBERON:0003075,4.74e-18,64;UBERON:0007284,4.74e-18,64;UBERON:0002020,5.67e-18,34;UBERON:0002616,9.05e-18,46;UBERON:0010371,1.60e-14,73;UBERON:0004121,1.62e-14,95;UBERON:0000924,1.62e-14,95;UBERON:0006601,1.62e-14,95;UBERON:0003528,1.19e-13,29;UBERON:0002791,1.19e-13,29;UBERON:0001893,1.19e-13,29;UBERON:0003080,1.99e-13,40;UBERON:0002780,2.10e-12,39;UBERON:0001890,2.10e-12,39;UBERON:0006240,2.10e-12,39;UBERON:0003076,9.86e-12,12;UBERON:0003057,9.86e-12,12;UBERON:0003056,1.41e-10,49;UBERON:0002021,3.69e-10,10;UBERON:0000411,3.69e-10,10;UBERON:0001950,3.69e-10,10;UBERON:0010314,1.89e-09,92;UBERON:0002420,8.30e-09,8;UBERON:0007245,8.30e-09,8;UBERON:0010009,8.30e-09,8;UBERON:0010011,8.30e-09,8;UBERON:0000454,8.30e-09,8;UBERON:0000025,3.32e-08,114;UBERON:0002619,6.68e-08,17;UBERON:0002950,2.72e-07,4;UBERON:0001891,2.72e-07,4;UBERON:0009616,2.72e-07,4;UBERON:0010286,2.72e-07,4;UBERON:0002240,2.73e-07,6;UBERON:0005174,2.73e-07,6;UBERON:0001137,2.73e-07,6;UBERON:0000956,3.38e-07,21;UBERON:0001869,3.38e-07,21;UBERON:0000203,3.38e-07,21;UBERON:0004111,5.27e-07,122
|phase1_expression=0.320297694209588,1.04692622291808,0.909998478779072,0.60492842261366,0,0.503637815735669,0.700837921786577,1.03298658753261,0,0.468129052643987,0,0.558405112967355,0.171200729931206,0.174840804837995,0.666219523631325,0.607425802169478,1.39912375625629,0.946386496074713,1.50825876966313,0.84877930359606,1.53077922271926,0,0,0.799962113967033,0.91763712426868,0.57423196411502,2.15380998079537,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,1.27006134691926,2.46025915033828,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,1.76469446409304,0,0.485510353031154,0,0.405507724878058,0.917733760808408,1.56478268869608,0,0.659058548203415,0.777719596297134,0.419959264876088,1.43752564364972,1.51004345451963,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0.809265843438391,0,0,1.35537812827653,0,0.899899717281399,0.988866362566974,1.4209602298922,0.898800331555214,2.30530983192933,0.207379224616955,0.405017814995072,0.210324961351382,1.99955689082663,1.54607978666129,0.489963196859816,0.383381884072945,1.83843757322004,4.40463523997555,6.00130489000382,7.0659005297872,0.659431438650969,1.82975287204819,2.08365348222704,8.93385596804419,11.2552522006336,8.09830713217094,1.17851434189467,1.99320353118744,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,4.0798280022465,0,1.29955283489534,0.448026887097336,1.40444420131752,1.02258193546835,0.779358013808606,0,0.422530259330042,1.28326477414318,5.09610479413291,0,0,0,0,1.02765491747154,1.03575153458869,0,0.867426633830679,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.647067399789637,0.662524555381181,0,0,3.22058876712702,2.51336048176146,0.255457055208591,0.479260498023681,0.599902730993408,0.381210681219194,5.09288173976397,5.94750783664214,1.7591609295801,3.47648640384553,4.09144731728529,2.90903262383384,5.19172041816825,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.90422890701429,0.476255494059295,0.12811372028485,0.562210347358373,1.03481348295606,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0.787056926989615,0.154267112887378,0.465067889500816,0,0.350296027101508,0,0.492502392237286,0.405344047729279,0.730999937126662,0,0.536825675041487,3.78521907415429,0.617427674275707,0,1.05780226665418,0,0,0.128867461322093,0,0.444756087689741,0.380451252225118,0,0.658795818896044,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0.592905254174298,0.667380422864376,1.17935397067922,0.449724224769707,0.202860121388503,0.72353147925725,0.763877555344259,0,0.648540907100142,1.09824565275233,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0.585400943573396,0,0.221464689648775,0.318909537314974,0,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,3.53211297973142,4.33683240391152,0.491804836130026,1.51482556322624,0.315508219416257,0,0,0.238968797952552,0,0.566153061577665,0.404810701674894,0,0.790575555893047,1.60660658210904,0,0,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,2.10837217149998,0,0.340439605753788,0,0.129358683782755,0.643011105094777,0.354680467284547,0.713475270408282,0.493647061806363,1.2178597964584,0.938686832254841,0,0,0,0.322928853391811,0.361877549568935,0,0,0,5.56275906031529,0.512612642393558,0.206386867963223,0.370389054739423,0.565105371014073,0.683471138605126,0.686334519619568,1.69978429993855,0.559805809294632,0.967399816630967,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.247960367176008,0,0.259229946583586,0.621339313086926,0.56369293868419,0.149516546043979,0.330916980914195,0.388902376688095,0,0,0.234714477291508,0.13020438484395,0,0.724752362478018,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.537080087002444,0.198681354781265,0.360586348559907,0.443068581523732,0.201932899896295,0.304827226619999,0,0.292373642219257,0.288635524920988,0.233753804363138,0,0.665957860122194,0.269141569828427,0,0.386379188064381,0,0.183151624267265,0,0,3.3885110557024,1.38097570952153,3.43737308063638,2.749650917499,4.7955776383945,2.2661816921691,3.37511250115903,1.80128481289688,0.906284817968409,2.07104124700728,0,0,0.512200817262403,0.243106717068294,1.04806581313991,0.735374033800057,0,0,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.280924522409647,0.512201219238954,0.34461281373368,1.42888107384922,0.463537303779422,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.476872379894642,0.581385666529314,0.282328141245992,0.507687647350059,0.548783918618318,0,0.135804113845862,0.561142271657738,0.830445126869219,0.492522411877817,1.22769312950907,0.309873682371932,0.578719832943424,0.749431733813838,0,0.429742108096597,0.19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|short_description=p4@Smap2
|short_description=p4@Smap2
}}
}}

Revision as of 02:54, 14 November 2012

Short description:p4@Smap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Smap2_5end
Coexpression cluster:MCL_coexpression_mm9:491
Association with transcript: 238bp_to_ENSMUST00000043200, NM_133716, uc008unw.2_5end
EntrezGene:Smap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Smap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.97e-0923
neuroblast (sensu Vertebrata)4.97e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.36e-2654
neural tube2.40e-2352
neural rod2.40e-2352
future spinal cord2.40e-2352
neural keel2.40e-2352
central nervous system1.91e-2173
nervous system1.51e-2075
brain1.17e-1847
future brain1.17e-1847
neurectoderm4.74e-1864
neural plate4.74e-1864
presumptive neural plate4.74e-1864
gray matter5.67e-1834
regional part of brain9.05e-1846
ecto-epithelium1.60e-1473
ectoderm-derived structure1.62e-1495
ectoderm1.62e-1495
presumptive ectoderm1.62e-1495
brain grey matter1.19e-1329
regional part of telencephalon1.19e-1329
telencephalon1.19e-1329
anterior neural tube1.99e-1340
regional part of forebrain2.10e-1239
forebrain2.10e-1239
future forebrain2.10e-1239
posterior neural tube9.86e-1212
chordal neural plate9.86e-1212
pre-chordal neural plate1.41e-1049
occipital lobe3.69e-1010
visual cortex3.69e-1010
neocortex3.69e-1010
structure with developmental contribution from neural crest1.89e-0992
basal ganglion8.30e-098
nuclear complex of neuraxis8.30e-098
aggregate regional part of brain8.30e-098
collection of basal ganglia8.30e-098
cerebral subcortex8.30e-098
tube3.32e-08114
regional part of cerebral cortex6.68e-0817
regional part of midbrain2.72e-074
midbrain2.72e-074
presumptive midbrain2.72e-074
midbrain neural tube2.72e-074
spinal cord2.73e-076
dorsal region element2.73e-076
dorsum2.73e-076
cerebral cortex3.38e-0721
cerebral hemisphere3.38e-0721
pallium3.38e-0721
anatomical conduit5.27e-07122







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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