FFCP PHASE1:Mm9::chrX:10294628..10294640,+: Difference between revisions
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|id=chrX:10294628..10294640,+ | |id=chrX:10294628..10294640,+ | ||
|ontology_enrichment_celltype=CL:0002319!9.19e-09!43;CL:0000221!1.51e-08!44;CL:0000133!1.51e-08!44;CL:0000055!7.78e-08!50;CL:0002321!9.55e-08!70;CL:0000220!9.55e-08!70;CL:0000333!4.54e-07!10;CL:0000095!4.54e-07!10;CL:0000243!4.54e-07!10;CL:0000123!4.54e-07!10;CL:0000125!4.54e-07!10;CL:0000030!4.54e-07!10;CL:0000339!4.54e-07!10;CL:0000144!8.34e-07!121;CL:0000012!8.34e-07!121 | |ontology_enrichment_celltype=CL:0002319!9.19e-09!43;CL:0000221!1.51e-08!44;CL:0000133!1.51e-08!44;CL:0000055!7.78e-08!50;CL:0002321!9.55e-08!70;CL:0000220!9.55e-08!70;CL:0000333!4.54e-07!10;CL:0000095!4.54e-07!10;CL:0000243!4.54e-07!10;CL:0000123!4.54e-07!10;CL:0000125!4.54e-07!10;CL:0000030!4.54e-07!10;CL:0000339!4.54e-07!10;CL:0000144!8.34e-07!121;CL:0000012!8.34e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.02e-09,43;CL:0000221,1.48e-08,44;CL:0000133,1.48e-08,44;CL:0002321,8.44e-08,70;CL:0000333,4.47e-07,10;CL:0000095,4.47e-07,10;CL:0000243,4.47e-07,10;CL:0000123,4.47e-07,10;CL:0000125,4.47e-07,10;CL:0000030,4.47e-07,10;CL:0000339,4.47e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.16e-12!75;UBERON:0001016!1.16e-12!75;UBERON:0001017!1.02e-11!73;UBERON:0005743!1.02e-11!73;UBERON:0004121!1.03e-09!102;UBERON:0000924!1.03e-09!102;UBERON:0006601!1.03e-09!102;UBERON:0001049!7.45e-09!52;UBERON:0005068!7.45e-09!52;UBERON:0006241!7.45e-09!52;UBERON:0007135!7.45e-09!52;UBERON:0000955!3.63e-08!50;UBERON:0006238!3.63e-08!50;UBERON:0002616!6.74e-08!49;UBERON:0003076!3.84e-07!12;UBERON:0003057!3.84e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!1.16e-12!75;UBERON:0001016!1.16e-12!75;UBERON:0001017!1.02e-11!73;UBERON:0005743!1.02e-11!73;UBERON:0004121!1.03e-09!102;UBERON:0000924!1.03e-09!102;UBERON:0006601!1.03e-09!102;UBERON:0001049!7.45e-09!52;UBERON:0005068!7.45e-09!52;UBERON:0006241!7.45e-09!52;UBERON:0007135!7.45e-09!52;UBERON:0000955!3.63e-08!50;UBERON:0006238!3.63e-08!50;UBERON:0002616!6.74e-08!49;UBERON:0003076!3.84e-07!12;UBERON:0003057!3.84e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.13e-12,75;UBERON:0001017,9.97e-12,73;UBERON:0004121,4.35e-10,95;UBERON:0000924,4.35e-10,95;UBERON:0006601,4.35e-10,95;UBERON:0000073,7.83e-10,54;UBERON:0001049,7.31e-09,52;UBERON:0005068,7.31e-09,52;UBERON:0006241,7.31e-09,52;UBERON:0007135,7.31e-09,52;UBERON:0003076,3.78e-07,12;UBERON:0003057,3.78e-07,12;UBERON:0002346,6.28e-07,64;UBERON:0003075,6.28e-07,64;UBERON:0007284,6.28e-07,64;UBERON:0000955,8.43e-07,47;UBERON:0006238,8.43e-07,47 | |||
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| ||
|short_description=p3@Mid1ip1 | |short_description=p3@Mid1ip1 | ||
}} | }} |
Revision as of 20:00, 14 November 2012
Short description: | p3@Mid1ip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mid1ip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3733 |
Association with transcript: | 112bp_to_ENSMUST00000008179, ENSMUST00000115524_5end |
EntrezGene: | Mid1ip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.02e-09 | 43 |
ectodermal cell | 1.48e-08 | 44 |
neurectodermal cell | 1.48e-08 | 44 |
embryonic cell | 8.44e-08 | 70 |
migratory neural crest cell | 4.47e-07 | 10 |
neuron associated cell | 4.47e-07 | 10 |
glial cell (sensu Vertebrata) | 4.47e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.47e-07 | 10 |
glial cell | 4.47e-07 | 10 |
glioblast | 4.47e-07 | 10 |
glioblast (sensu Vertebrata) | 4.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.13e-12 | 75 |
central nervous system | 9.97e-12 | 73 |
ectoderm-derived structure | 4.35e-10 | 95 |
ectoderm | 4.35e-10 | 95 |
presumptive ectoderm | 4.35e-10 | 95 |
regional part of nervous system | 7.83e-10 | 54 |
neural tube | 7.31e-09 | 52 |
neural rod | 7.31e-09 | 52 |
future spinal cord | 7.31e-09 | 52 |
neural keel | 7.31e-09 | 52 |
posterior neural tube | 3.78e-07 | 12 |
chordal neural plate | 3.78e-07 | 12 |
neurectoderm | 6.28e-07 | 64 |
neural plate | 6.28e-07 | 64 |
presumptive neural plate | 6.28e-07 | 64 |
brain | 8.43e-07 | 47 |
future brain | 8.43e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.