FFCP PHASE1:Mm9::chr12:60112962..60112979,-: Difference between revisions
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|id=chr12:60112962..60112979,- | |id=chr12:60112962..60112979,- | ||
|ontology_enrichment_celltype=CL:0000117!3.35e-14!23;CL:0000337!3.35e-14!23;CL:0000540!2.36e-10!33;CL:0000047!2.36e-10!33;CL:0000031!2.36e-10!33;CL:0000404!2.36e-10!33;CL:0000393!8.54e-08!39;CL:0000211!8.54e-08!39 | |ontology_enrichment_celltype=CL:0000117!3.35e-14!23;CL:0000337!3.35e-14!23;CL:0000540!2.36e-10!33;CL:0000047!2.36e-10!33;CL:0000031!2.36e-10!33;CL:0000404!2.36e-10!33;CL:0000393!8.54e-08!39;CL:0000211!8.54e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-14,23;CL:0000337,3.34e-14,23;CL:0000540,2.35e-10,33;CL:0000047,2.35e-10,33;CL:0000031,2.35e-10,33;CL:0000404,2.35e-10,33;CL:0000393,8.52e-08,39;CL:0000211,8.52e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.59e-21!63;UBERON:0002346!1.72e-19!71;UBERON:0003075!1.72e-19!71;UBERON:0007284!1.72e-19!71;UBERON:0001049!2.10e-19!52;UBERON:0005068!2.10e-19!52;UBERON:0006241!2.10e-19!52;UBERON:0007135!2.10e-19!52;UBERON:0003056!9.57e-19!49;UBERON:0000955!1.47e-18!50;UBERON:0006238!1.47e-18!50;UBERON:0002616!5.40e-18!49;UBERON:0001017!7.63e-18!73;UBERON:0005743!7.63e-18!73;UBERON:0002020!3.38e-17!34;UBERON:0000073!5.72e-17!75;UBERON:0001016!5.72e-17!75;UBERON:0003080!2.36e-16!40;UBERON:0002780!8.52e-16!39;UBERON:0001890!8.52e-16!39;UBERON:0006240!8.52e-16!39;UBERON:0004121!1.62e-15!102;UBERON:0000924!1.62e-15!102;UBERON:0006601!1.62e-15!102;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0000153!6.45e-11!94;UBERON:0007811!4.48e-10!86;UBERON:0000956!8.14e-10!21;UBERON:0001869!8.14e-10!21;UBERON:0000203!8.14e-10!21;UBERON:0002619!7.94e-08!17;UBERON:0000025!4.19e-07!114;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10 | |ontology_enrichment_uberon=UBERON:0000033!6.59e-21!63;UBERON:0002346!1.72e-19!71;UBERON:0003075!1.72e-19!71;UBERON:0007284!1.72e-19!71;UBERON:0001049!2.10e-19!52;UBERON:0005068!2.10e-19!52;UBERON:0006241!2.10e-19!52;UBERON:0007135!2.10e-19!52;UBERON:0003056!9.57e-19!49;UBERON:0000955!1.47e-18!50;UBERON:0006238!1.47e-18!50;UBERON:0002616!5.40e-18!49;UBERON:0001017!7.63e-18!73;UBERON:0005743!7.63e-18!73;UBERON:0002020!3.38e-17!34;UBERON:0000073!5.72e-17!75;UBERON:0001016!5.72e-17!75;UBERON:0003080!2.36e-16!40;UBERON:0002780!8.52e-16!39;UBERON:0001890!8.52e-16!39;UBERON:0006240!8.52e-16!39;UBERON:0004121!1.62e-15!102;UBERON:0000924!1.62e-15!102;UBERON:0006601!1.62e-15!102;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0000153!6.45e-11!94;UBERON:0007811!4.48e-10!86;UBERON:0000956!8.14e-10!21;UBERON:0001869!8.14e-10!21;UBERON:0000203!8.14e-10!21;UBERON:0002619!7.94e-08!17;UBERON:0000025!4.19e-07!114;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.84e-22,92;UBERON:0002346,1.48e-21,64;UBERON:0003075,1.48e-21,64;UBERON:0007284,1.48e-21,64;UBERON:0000073,9.75e-21,54;UBERON:0001049,2.08e-19,52;UBERON:0005068,2.08e-19,52;UBERON:0006241,2.08e-19,52;UBERON:0007135,2.08e-19,52;UBERON:0003056,9.52e-19,49;UBERON:0010371,6.09e-18,73;UBERON:0001017,7.15e-18,73;UBERON:0002020,3.36e-17,34;UBERON:0001016,5.37e-17,75;UBERON:0000955,1.12e-16,47;UBERON:0006238,1.12e-16,47;UBERON:0004121,1.28e-16,95;UBERON:0000924,1.28e-16,95;UBERON:0006601,1.28e-16,95;UBERON:0003080,2.34e-16,40;UBERON:0002616,3.98e-16,46;UBERON:0002780,8.48e-16,39;UBERON:0001890,8.48e-16,39;UBERON:0006240,8.48e-16,39;UBERON:0003528,1.42e-14,29;UBERON:0002791,1.42e-14,29;UBERON:0001893,1.42e-14,29;UBERON:0000956,8.12e-10,21;UBERON:0001869,8.12e-10,21;UBERON:0000203,8.12e-10,21;UBERON:0002619,7.92e-08,17;UBERON:0000025,4.18e-07,114;UBERON:0002021,4.59e-07,10;UBERON:0000411,4.59e-07,10;UBERON:0001950,4.59e-07,10 | |||
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| ||
|short_description=p3@Sec23a | |short_description=p3@Sec23a | ||
}} | }} |
Revision as of 20:30, 13 November 2012
Short description: | p3@Sec23a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sec23a_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 24bp_to_ENSMUST00000021375, ENSMUST00000134223, NM_009147, uc007npw.1_5end |
EntrezGene: | Sec23a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.34e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.34e-14 | 23 |
neuron | 2.35e-10 | 33 |
neuronal stem cell | 2.35e-10 | 33 |
neuroblast | 2.35e-10 | 33 |
electrically signaling cell | 2.35e-10 | 33 |
electrically responsive cell | 8.52e-08 | 39 |
electrically active cell | 8.52e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 8.84e-22 | 92 |
neurectoderm | 1.48e-21 | 64 |
neural plate | 1.48e-21 | 64 |
presumptive neural plate | 1.48e-21 | 64 |
regional part of nervous system | 9.75e-21 | 54 |
neural tube | 2.08e-19 | 52 |
neural rod | 2.08e-19 | 52 |
future spinal cord | 2.08e-19 | 52 |
neural keel | 2.08e-19 | 52 |
pre-chordal neural plate | 9.52e-19 | 49 |
ecto-epithelium | 6.09e-18 | 73 |
central nervous system | 7.15e-18 | 73 |
gray matter | 3.36e-17 | 34 |
nervous system | 5.37e-17 | 75 |
brain | 1.12e-16 | 47 |
future brain | 1.12e-16 | 47 |
ectoderm-derived structure | 1.28e-16 | 95 |
ectoderm | 1.28e-16 | 95 |
presumptive ectoderm | 1.28e-16 | 95 |
anterior neural tube | 2.34e-16 | 40 |
regional part of brain | 3.98e-16 | 46 |
regional part of forebrain | 8.48e-16 | 39 |
forebrain | 8.48e-16 | 39 |
future forebrain | 8.48e-16 | 39 |
brain grey matter | 1.42e-14 | 29 |
regional part of telencephalon | 1.42e-14 | 29 |
telencephalon | 1.42e-14 | 29 |
cerebral cortex | 8.12e-10 | 21 |
cerebral hemisphere | 8.12e-10 | 21 |
pallium | 8.12e-10 | 21 |
regional part of cerebral cortex | 7.92e-08 | 17 |
tube | 4.18e-07 | 114 |
occipital lobe | 4.59e-07 | 10 |
visual cortex | 4.59e-07 | 10 |
neocortex | 4.59e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.