FFCP PHASE1:Mm9::chr4:138010631..138010652,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr4:138010631..138010652,+ | |id=chr4:138010631..138010652,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.43e-13!33;CL:0000047!2.43e-13!33;CL:0000031!2.43e-13!33;CL:0000404!2.43e-13!33;CL:0002321!1.06e-11!70;CL:0000220!1.06e-11!70;CL:0000221!4.56e-11!44;CL:0000133!4.56e-11!44;CL:0002319!5.99e-11!43;CL:0000393!2.22e-10!39;CL:0000211!2.22e-10!39;CL:0000117!7.26e-10!23;CL:0000337!7.26e-10!23;CL:0000055!3.80e-09!50 | |ontology_enrichment_celltype=CL:0000540!2.43e-13!33;CL:0000047!2.43e-13!33;CL:0000031!2.43e-13!33;CL:0000404!2.43e-13!33;CL:0002321!1.06e-11!70;CL:0000220!1.06e-11!70;CL:0000221!4.56e-11!44;CL:0000133!4.56e-11!44;CL:0002319!5.99e-11!43;CL:0000393!2.22e-10!39;CL:0000211!2.22e-10!39;CL:0000117!7.26e-10!23;CL:0000337!7.26e-10!23;CL:0000055!3.80e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.95e-13,33;CL:0000047,1.95e-13,33;CL:0000031,1.95e-13,33;CL:0000404,1.95e-13,33;CL:0002321,8.20e-12,70;CL:0000221,3.81e-11,44;CL:0000133,3.81e-11,44;CL:0002319,5.01e-11,43;CL:0000393,3.17e-10,39;CL:0000211,3.17e-10,39;CL:0000117,6.21e-10,23;CL:0000337,6.21e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-26!73;UBERON:0005743!1.25e-26!73;UBERON:0000073!1.63e-25!75;UBERON:0001016!1.63e-25!75;UBERON:0004121!5.87e-20!102;UBERON:0000924!5.87e-20!102;UBERON:0006601!5.87e-20!102;UBERON:0001049!7.09e-19!52;UBERON:0005068!7.09e-19!52;UBERON:0006241!7.09e-19!52;UBERON:0007135!7.09e-19!52;UBERON:0000955!7.07e-18!50;UBERON:0006238!7.07e-18!50;UBERON:0002346!1.28e-17!71;UBERON:0003075!1.28e-17!71;UBERON:0007284!1.28e-17!71;UBERON:0000033!1.82e-17!63;UBERON:0002616!2.85e-17!49;UBERON:0002020!3.80e-15!34;UBERON:0003080!3.21e-14!40;UBERON:0002780!1.05e-13!39;UBERON:0001890!1.05e-13!39;UBERON:0006240!1.05e-13!39;UBERON:0003056!1.06e-13!49;UBERON:0004111!6.23e-13!122;UBERON:0000025!7.58e-13!114;UBERON:0002791!2.68e-12!29;UBERON:0003528!2.68e-12!29;UBERON:0001893!2.68e-12!29;UBERON:0000956!8.65e-09!21;UBERON:0001869!8.65e-09!21;UBERON:0000203!8.65e-09!21;UBERON:0002021!3.42e-08!10;UBERON:0000411!3.42e-08!10;UBERON:0001950!3.42e-08!10;UBERON:0002619!8.20e-08!17;UBERON:0000468!2.42e-07!333;UBERON:0000480!7.15e-07!308;UBERON:0000467!7.15e-07!308 | |ontology_enrichment_uberon=UBERON:0001017!1.25e-26!73;UBERON:0005743!1.25e-26!73;UBERON:0000073!1.63e-25!75;UBERON:0001016!1.63e-25!75;UBERON:0004121!5.87e-20!102;UBERON:0000924!5.87e-20!102;UBERON:0006601!5.87e-20!102;UBERON:0001049!7.09e-19!52;UBERON:0005068!7.09e-19!52;UBERON:0006241!7.09e-19!52;UBERON:0007135!7.09e-19!52;UBERON:0000955!7.07e-18!50;UBERON:0006238!7.07e-18!50;UBERON:0002346!1.28e-17!71;UBERON:0003075!1.28e-17!71;UBERON:0007284!1.28e-17!71;UBERON:0000033!1.82e-17!63;UBERON:0002616!2.85e-17!49;UBERON:0002020!3.80e-15!34;UBERON:0003080!3.21e-14!40;UBERON:0002780!1.05e-13!39;UBERON:0001890!1.05e-13!39;UBERON:0006240!1.05e-13!39;UBERON:0003056!1.06e-13!49;UBERON:0004111!6.23e-13!122;UBERON:0000025!7.58e-13!114;UBERON:0002791!2.68e-12!29;UBERON:0003528!2.68e-12!29;UBERON:0001893!2.68e-12!29;UBERON:0000956!8.65e-09!21;UBERON:0001869!8.65e-09!21;UBERON:0000203!8.65e-09!21;UBERON:0002021!3.42e-08!10;UBERON:0000411!3.42e-08!10;UBERON:0001950!3.42e-08!10;UBERON:0002619!8.20e-08!17;UBERON:0000468!2.42e-07!333;UBERON:0000480!7.15e-07!308;UBERON:0000467!7.15e-07!308 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.75e-27,73;UBERON:0001016,1.04e-25,75;UBERON:0004121,8.32e-22,95;UBERON:0000924,8.32e-22,95;UBERON:0006601,8.32e-22,95;UBERON:0000073,2.09e-20,54;UBERON:0002346,5.13e-20,64;UBERON:0003075,5.13e-20,64;UBERON:0007284,5.13e-20,64;UBERON:0001049,5.11e-19,52;UBERON:0005068,5.11e-19,52;UBERON:0006241,5.11e-19,52;UBERON:0007135,5.11e-19,52;UBERON:0011216,1.28e-18,194;UBERON:0010371,1.69e-16,73;UBERON:0000955,3.59e-16,47;UBERON:0006238,3.59e-16,47;UBERON:0002616,1.41e-15,46;UBERON:0002020,2.94e-15,34;UBERON:0003080,2.53e-14,40;UBERON:0002780,8.37e-14,39;UBERON:0001890,8.37e-14,39;UBERON:0006240,8.37e-14,39;UBERON:0003056,8.46e-14,49;UBERON:0004111,1.65e-12,122;UBERON:0000025,2.05e-12,114;UBERON:0003528,2.19e-12,29;UBERON:0002791,2.19e-12,29;UBERON:0001893,2.19e-12,29;UBERON:0010314,4.33e-12,92;UBERON:0000956,7.55e-09,21;UBERON:0001869,7.55e-09,21;UBERON:0000203,7.55e-09,21;UBERON:0002021,3.02e-08,10;UBERON:0000411,3.02e-08,10;UBERON:0001950,3.02e-08,10;UBERON:0002619,7.29e-08,17 | |||
|phase1_expression=13.1322054625931,27.5690572035095,37.7649368693315,44.462239062104,54.5976345641518,21.8243053485457,19.6234618100242,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.315462165358238,0.411343300817216,0.42438965179803,36.0583550240536,0,0,9.91953021319121,13.535147582963,14.3557991028755,16.3689558540448,12.7128027284675,36.2944731161674,25.7070732355129,12.4169085966971,0,0,0,10.9763615505484,8.6442015586416,10.2084678131185,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.367093504323363,5.47673941043627,4.57852828398938,5.05278220289285,4.6663175777828,2.79972843250725,10.062679505548,0.167782606057736,0,0,10.2903774414379,4.87106847895886,6.18806510732931,24.8849246857305,37.0293685490423,29.1562445612842,2.71075625655306,0,0.449949858640699,0.988866362566974,0,7.49000276296012,13.4476406862544,11.8206158031665,17.8207838597832,12.1988477583802,62.557565584433,75.9787780873551,14.2089327089347,7.57179221044067,9.19218786610021,59.4625757396699,75.0801547940904,69.1229399653096,29.8063010270238,30.7398482504096,26.045668527838,50.5321228192499,54.587973173073,55.7713604385357,59.2203456802072,53.8164953420609,45.6678642271986,2.80186915332781,3.09843396437821,5.79728977403356,24.9522924324602,50.9978500280813,53.4306159721439,39.6363614643078,51.9711189032909,19.6622188184453,0,0,0,10.140726223921,0,0,0,13.8554266247177,12.6679932737549,17.6933555755174,40.8778289394235,0,4.60170631100957,2.4287945747259,3.04465478312141,3.22861696158482,5.72746034099966,3.88042733547826,5.90632979249475,9.64060374164058,3.03658649531814,0,2.58826959915855,2.65009822152472,0.969750506270444,27.9587641827183,25.4719293400046,37.281513812795,24.7793343552334,0.11981512450592,0.599902730993408,0.254140454146129,45.9857262972806,115.747652513112,16.9633375352367,219.540116402845,322.712907150877,61.0896851005107,100.265100575874,7.33243419722277,3.35898820647251,3.28539585963777,3.78795340595653,4.94457683258274,6.89706313300419,7.74267158163002,10.3986324306643,9.45707338203457,8.96796041993949,12.3686276418842,5.69147415625834,0.431135985865684,0.945530400839096,0.879755620819744,1.53437012699302,1.39023624612799,0.696504333044333,1.02891068203972,6.56813080501028,0,0,0,0.207125772535502,0.938104239924385,0.900310307305074,1.18372367792605,1.18058539048442,1.23413690309903,0.930135779001631,3.48755421819505,2.10177616260905,2.46839774870221,4.26835406605648,6.4044359541226,4.09359964790931,7.02560368931362,6.97873377553933,62.876694620674,21.8157778244083,22.4684772428983,3.70230793328962,5.11891801284562,4.87697010906921,1.9330119198314,4.03367049246685,6.67134131534611,6.65789691393957,22.302865892592,19.1050787479853,23.3741744184251,34.4194696631191,22.0309418444606,30.5598598942435,15.3458015411033,17.7235733196387,10.0523987505133,4.91268604221834,1.1270773567308,8.75700709734851,9.89157684554891,13.3258057791605,14.6708766128277,35.8692659590433,19.9388384358546,23.3220639812203,44.7643466901595,2.00214126859313,1.96558995113203,1.57403478669398,2.84004169943904,3.85883455603867,5.60176873919124,9.20627639842594,23.1853374288301,20.317544575918,136.579796200987,40.1912223481984,25.8991268685085,34.6033062787543,26.0126249606773,29.9114983245288,6.65111484599777,2.27389694124582,1.14075483509418,2.37643120085263,2.58159273117352,3.01511263395268,4.99891645860629,10.5372169843211,7.25121662888479,8.63712289630222,9.24837658213425,11.6342953448174,6.38934432903814,14.0309586824066,0,0,1.96705709207614,2.20749397043786,37.4082874671555,50.2838135480552,0,4.03953483526997,36.2834452328695,36.3108032195874,42.6538327510942,27.2424429665909,20.0518806674155,30.2891887944051,25.9078849071932,25.4262596382841,26.0889933444706,61.693692752987,3.40656204499845,5.52003371368491,6.51547837414304,7.58862565673663,1.32745138339963,3.8844901784797,2.41858845571801,2.82907619633847,2.36241514304618,4.30409207121498,7.75284879504663,7.99774204850512,4.63446591900138,2.84433082142234,4.21674434299995,6.18813259489121,16.3411010761818,4.32146625675145,7.37344497561701,6.43011105094777,17.7340233642274,16.4099312193905,9.70839221552514,15.22324745573,1.40803024838226,2.54198485036584,2.8668691747145,2.63818004706368,1.29171541356724,2.11095237248546,2.74556391207214,2.79039529566604,29.1480836629851,38.3830375161755,2.39219233116994,3.92135049130123,4.25947412950337,2.44878994106098,2.87057878214153,3.66045077130436,0.679913719975421,0.559805809294632,0.967399816630967,4.77335309007557,1.89801596148681,1.62655573701479,3.34816556547584,3.3454127362315,5.02233896616208,4.98998081623837,9.09188012978695,6.02038666563268,25.015689845316,9.32008969630389,0.56369293868419,1.34564891439581,1.48912641411388,1.94451188344048,2.0665571756437,1.520605129417,1.05621514781179,2.21347454234715,1.25831213310853,0.483168241652012,0.288030006257865,0,1.62180172232131,0.718976700153791,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0.201932899896295,0.15241361331,0,0.487289403698762,0.288635524920988,0.350630706544707,4.0811469050738,0,0.0897138566094757,0,5.60249822693352,2.25218970541418,4.02933573387983,3.00115730710692,10.0314420807073,334.89784267192,313.941811297895,316.238323418547,393.715640749388,501.48040447211,476.653549252901,445.514850152992,398.083943650211,422.781867582263,438.02522374204,4.35906859853542,3.59122386060928,4.26834014385335,5.10524105843418,6.70762120409543,9.92754945630076,3.55594764482584,5.15087643097235,4.1719497246936,8.33900798820532,3.54871019846336,3.2066478035633,5.52484894072306,4.67383612555546,3.27382173046996,6.66811167796303,5.67833197129792,6.55891349576597,7.41754621445952,5.15196220470391,4.11443102862498,5.6792257970988,6.43777712857767,5.0871245821315,5.64656282491984,6.34609559187574,5.48783918618318,3.41990624869196,4.07412341537585,7.2948495315506,4.74540072496697,5.51625101303155,3.27384834535751,4.64810523557898,6.94463799532109,9.99242311751784,4.67863216890817,9.02458427002853,2.86932498103265,3.52946270591225,4.86922454802885 | |phase1_expression=13.1322054625931,27.5690572035095,37.7649368693315,44.462239062104,54.5976345641518,21.8243053485457,19.6234618100242,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.315462165358238,0.411343300817216,0.42438965179803,36.0583550240536,0,0,9.91953021319121,13.535147582963,14.3557991028755,16.3689558540448,12.7128027284675,36.2944731161674,25.7070732355129,12.4169085966971,0,0,0,10.9763615505484,8.6442015586416,10.2084678131185,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.367093504323363,5.47673941043627,4.57852828398938,5.05278220289285,4.6663175777828,2.79972843250725,10.062679505548,0.167782606057736,0,0,10.2903774414379,4.87106847895886,6.18806510732931,24.8849246857305,37.0293685490423,29.1562445612842,2.71075625655306,0,0.449949858640699,0.988866362566974,0,7.49000276296012,13.4476406862544,11.8206158031665,17.8207838597832,12.1988477583802,62.557565584433,75.9787780873551,14.2089327089347,7.57179221044067,9.19218786610021,59.4625757396699,75.0801547940904,69.1229399653096,29.8063010270238,30.7398482504096,26.045668527838,50.5321228192499,54.587973173073,55.7713604385357,59.2203456802072,53.8164953420609,45.6678642271986,2.80186915332781,3.09843396437821,5.79728977403356,24.9522924324602,50.9978500280813,53.4306159721439,39.6363614643078,51.9711189032909,19.6622188184453,0,0,0,10.140726223921,0,0,0,13.8554266247177,12.6679932737549,17.6933555755174,40.8778289394235,0,4.60170631100957,2.4287945747259,3.04465478312141,3.22861696158482,5.72746034099966,3.88042733547826,5.90632979249475,9.64060374164058,3.03658649531814,0,2.58826959915855,2.65009822152472,0.969750506270444,27.9587641827183,25.4719293400046,37.281513812795,24.7793343552334,0.11981512450592,0.599902730993408,0.254140454146129,45.9857262972806,115.747652513112,16.9633375352367,219.540116402845,322.712907150877,61.0896851005107,100.265100575874,7.33243419722277,3.35898820647251,3.28539585963777,3.78795340595653,4.94457683258274,6.89706313300419,7.74267158163002,10.3986324306643,9.45707338203457,8.96796041993949,12.3686276418842,5.69147415625834,0.431135985865684,0.945530400839096,0.879755620819744,1.53437012699302,1.39023624612799,0.696504333044333,1.02891068203972,6.56813080501028,0,0,0,0.207125772535502,0.938104239924385,0.900310307305074,1.18372367792605,1.18058539048442,1.23413690309903,0.930135779001631,3.48755421819505,2.10177616260905,2.46839774870221,4.26835406605648,6.4044359541226,4.09359964790931,7.02560368931362,6.97873377553933,62.876694620674,21.8157778244083,22.4684772428983,3.70230793328962,5.11891801284562,4.87697010906921,1.9330119198314,4.03367049246685,6.67134131534611,6.65789691393957,22.302865892592,19.1050787479853,23.3741744184251,34.4194696631191,22.0309418444606,30.5598598942435,15.3458015411033,17.7235733196387,10.0523987505133,4.91268604221834,1.1270773567308,8.75700709734851,9.89157684554891,13.3258057791605,14.6708766128277,35.8692659590433,19.9388384358546,23.3220639812203,44.7643466901595,2.00214126859313,1.96558995113203,1.57403478669398,2.84004169943904,3.85883455603867,5.60176873919124,9.20627639842594,23.1853374288301,20.317544575918,136.579796200987,40.1912223481984,25.8991268685085,34.6033062787543,26.0126249606773,29.9114983245288,6.65111484599777,2.27389694124582,1.14075483509418,2.37643120085263,2.58159273117352,3.01511263395268,4.99891645860629,10.5372169843211,7.25121662888479,8.63712289630222,9.24837658213425,11.6342953448174,6.38934432903814,14.0309586824066,0,0,1.96705709207614,2.20749397043786,37.4082874671555,50.2838135480552,0,4.03953483526997,36.2834452328695,36.3108032195874,42.6538327510942,27.2424429665909,20.0518806674155,30.2891887944051,25.9078849071932,25.4262596382841,26.0889933444706,61.693692752987,3.40656204499845,5.52003371368491,6.51547837414304,7.58862565673663,1.32745138339963,3.8844901784797,2.41858845571801,2.82907619633847,2.36241514304618,4.30409207121498,7.75284879504663,7.99774204850512,4.63446591900138,2.84433082142234,4.21674434299995,6.18813259489121,16.3411010761818,4.32146625675145,7.37344497561701,6.43011105094777,17.7340233642274,16.4099312193905,9.70839221552514,15.22324745573,1.40803024838226,2.54198485036584,2.8668691747145,2.63818004706368,1.29171541356724,2.11095237248546,2.74556391207214,2.79039529566604,29.1480836629851,38.3830375161755,2.39219233116994,3.92135049130123,4.25947412950337,2.44878994106098,2.87057878214153,3.66045077130436,0.679913719975421,0.559805809294632,0.967399816630967,4.77335309007557,1.89801596148681,1.62655573701479,3.34816556547584,3.3454127362315,5.02233896616208,4.98998081623837,9.09188012978695,6.02038666563268,25.015689845316,9.32008969630389,0.56369293868419,1.34564891439581,1.48912641411388,1.94451188344048,2.0665571756437,1.520605129417,1.05621514781179,2.21347454234715,1.25831213310853,0.483168241652012,0.288030006257865,0,1.62180172232131,0.718976700153791,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0.201932899896295,0.15241361331,0,0.487289403698762,0.288635524920988,0.350630706544707,4.0811469050738,0,0.0897138566094757,0,5.60249822693352,2.25218970541418,4.02933573387983,3.00115730710692,10.0314420807073,334.89784267192,313.941811297895,316.238323418547,393.715640749388,501.48040447211,476.653549252901,445.514850152992,398.083943650211,422.781867582263,438.02522374204,4.35906859853542,3.59122386060928,4.26834014385335,5.10524105843418,6.70762120409543,9.92754945630076,3.55594764482584,5.15087643097235,4.1719497246936,8.33900798820532,3.54871019846336,3.2066478035633,5.52484894072306,4.67383612555546,3.27382173046996,6.66811167796303,5.67833197129792,6.55891349576597,7.41754621445952,5.15196220470391,4.11443102862498,5.6792257970988,6.43777712857767,5.0871245821315,5.64656282491984,6.34609559187574,5.48783918618318,3.41990624869196,4.07412341537585,7.2948495315506,4.74540072496697,5.51625101303155,3.27384834535751,4.64810523557898,6.94463799532109,9.99242311751784,4.67863216890817,9.02458427002853,2.86932498103265,3.52946270591225,4.86922454802885 | ||
|short_description=p3@Camk2n1 | |short_description=p3@Camk2n1 | ||
}} | }} |
Revision as of 13:53, 13 November 2012
Short description: | p3@Camk2n1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Camk2n1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 402bp_to_ENSMUST00000050918_5end |
EntrezGene: | Camk2n1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.95e-13 | 33 |
neuronal stem cell | 1.95e-13 | 33 |
neuroblast | 1.95e-13 | 33 |
electrically signaling cell | 1.95e-13 | 33 |
embryonic cell | 8.20e-12 | 70 |
ectodermal cell | 3.81e-11 | 44 |
neurectodermal cell | 3.81e-11 | 44 |
neural cell | 5.01e-11 | 43 |
electrically responsive cell | 3.17e-10 | 39 |
electrically active cell | 3.17e-10 | 39 |
CNS neuron (sensu Vertebrata) | 6.21e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.21e-10 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.