FFCP PHASE1:Mm9::chr7:28327793..28327828,-: Difference between revisions
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|id=chr7:28327793..28327828,- | |id=chr7:28327793..28327828,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.98e-17,54;UBERON:0001049,4.80e-16,52;UBERON:0005068,4.80e-16,52;UBERON:0006241,4.80e-16,52;UBERON:0007135,4.80e-16,52;UBERON:0004121,7.66e-16,95;UBERON:0000924,7.66e-16,95;UBERON:0006601,7.66e-16,95;UBERON:0001017,9.51e-16,73;UBERON:0001016,1.02e-15,75;UBERON:0000955,7.96e-14,47;UBERON:0006238,7.96e-14,47;UBERON:0010371,2.12e-13,73;UBERON:0002616,2.34e-13,46;UBERON:0002346,1.95e-12,64;UBERON:0003075,1.95e-12,64;UBERON:0007284,1.95e-12,64;UBERON:0003080,2.92e-12,40;UBERON:0002780,1.00e-11,39;UBERON:0001890,1.00e-11,39;UBERON:0006240,1.00e-11,39;UBERON:0002020,7.85e-11,34;UBERON:0003056,4.48e-10,49;UBERON:0003528,8.57e-09,29;UBERON:0002791,8.57e-09,29;UBERON:0001893,8.57e-09,29;UBERON:0002021,6.42e-08,10;UBERON:0000411,6.42e-08,10;UBERON:0001950,6.42e-08,10;UBERON:0010314,1.60e-07,92;UBERON:0002619,9.62e-07,17 | |||
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| ||
|short_description=p1@Pld3 | |short_description=p1@Pld3 | ||
}} | }} |
Revision as of 14:53, 13 November 2012
Short description: | p1@Pld3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pld3_5end |
Coexpression cluster: | MCL_coexpression_mm9:799 |
Association with transcript: | -29bp_to_ENSMUST00000150964_5end |
EntrezGene: | Pld3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.98e-17 | 54 |
neural tube | 4.80e-16 | 52 |
neural rod | 4.80e-16 | 52 |
future spinal cord | 4.80e-16 | 52 |
neural keel | 4.80e-16 | 52 |
ectoderm-derived structure | 7.66e-16 | 95 |
ectoderm | 7.66e-16 | 95 |
presumptive ectoderm | 7.66e-16 | 95 |
central nervous system | 9.51e-16 | 73 |
nervous system | 1.02e-15 | 75 |
brain | 7.96e-14 | 47 |
future brain | 7.96e-14 | 47 |
ecto-epithelium | 2.12e-13 | 73 |
regional part of brain | 2.34e-13 | 46 |
neurectoderm | 1.95e-12 | 64 |
neural plate | 1.95e-12 | 64 |
presumptive neural plate | 1.95e-12 | 64 |
anterior neural tube | 2.92e-12 | 40 |
regional part of forebrain | 1.00e-11 | 39 |
forebrain | 1.00e-11 | 39 |
future forebrain | 1.00e-11 | 39 |
gray matter | 7.85e-11 | 34 |
pre-chordal neural plate | 4.48e-10 | 49 |
brain grey matter | 8.57e-09 | 29 |
regional part of telencephalon | 8.57e-09 | 29 |
telencephalon | 8.57e-09 | 29 |
occipital lobe | 6.42e-08 | 10 |
visual cortex | 6.42e-08 | 10 |
neocortex | 6.42e-08 | 10 |
structure with developmental contribution from neural crest | 1.60e-07 | 92 |
regional part of cerebral cortex | 9.62e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.