FFCP PHASE1:Mm9::chr4:117222931..117223014,+: Difference between revisions
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|id=chr4:117222931..117223014,+ | |id=chr4:117222931..117223014,+ | ||
|ontology_enrichment_celltype=CL:0000117!7.12e-14!23;CL:0000337!7.12e-14!23;CL:0000221!4.28e-12!44;CL:0000133!4.28e-12!44;CL:0002319!8.26e-12!43;CL:0000055!4.67e-10!50;CL:0000540!6.47e-10!33;CL:0000047!6.47e-10!33;CL:0000031!6.47e-10!33;CL:0000404!6.47e-10!33;CL:0000393!2.36e-08!39;CL:0000211!2.36e-08!39;CL:0002321!1.24e-07!70;CL:0000220!1.24e-07!70 | |ontology_enrichment_celltype=CL:0000117!7.12e-14!23;CL:0000337!7.12e-14!23;CL:0000221!4.28e-12!44;CL:0000133!4.28e-12!44;CL:0002319!8.26e-12!43;CL:0000055!4.67e-10!50;CL:0000540!6.47e-10!33;CL:0000047!6.47e-10!33;CL:0000031!6.47e-10!33;CL:0000404!6.47e-10!33;CL:0000393!2.36e-08!39;CL:0000211!2.36e-08!39;CL:0002321!1.24e-07!70;CL:0000220!1.24e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.12e-14,23;CL:0000337,7.12e-14,23;CL:0000221,4.28e-12,44;CL:0000133,4.28e-12,44;CL:0002319,8.26e-12,43;CL:0000540,6.47e-10,33;CL:0000047,6.47e-10,33;CL:0000031,6.47e-10,33;CL:0000404,6.47e-10,33;CL:0000393,2.36e-08,39;CL:0000211,2.36e-08,39;CL:0002321,1.24e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.25e-28!73;UBERON:0005743!8.25e-28!73;UBERON:0000073!3.21e-26!75;UBERON:0001016!3.21e-26!75;UBERON:0001049!3.05e-25!52;UBERON:0005068!3.05e-25!52;UBERON:0006241!3.05e-25!52;UBERON:0007135!3.05e-25!52;UBERON:0000955!1.40e-23!50;UBERON:0006238!1.40e-23!50;UBERON:0002616!2.27e-23!49;UBERON:0000033!3.91e-23!63;UBERON:0002346!2.71e-20!71;UBERON:0003075!2.71e-20!71;UBERON:0007284!2.71e-20!71;UBERON:0003080!1.25e-19!40;UBERON:0002780!4.56e-19!39;UBERON:0001890!4.56e-19!39;UBERON:0006240!4.56e-19!39;UBERON:0003056!4.63e-19!49;UBERON:0004121!5.75e-19!102;UBERON:0000924!5.75e-19!102;UBERON:0006601!5.75e-19!102;UBERON:0002020!7.46e-19!34;UBERON:0002791!8.16e-16!29;UBERON:0003528!8.16e-16!29;UBERON:0001893!8.16e-16!29;UBERON:0000956!4.77e-11!21;UBERON:0001869!4.77e-11!21;UBERON:0000203!4.77e-11!21;UBERON:0000153!9.10e-10!94;UBERON:0007811!1.48e-09!86;UBERON:0002619!1.62e-09!17;UBERON:0004111!5.86e-09!122;UBERON:0000025!5.89e-09!114 | |ontology_enrichment_uberon=UBERON:0001017!8.25e-28!73;UBERON:0005743!8.25e-28!73;UBERON:0000073!3.21e-26!75;UBERON:0001016!3.21e-26!75;UBERON:0001049!3.05e-25!52;UBERON:0005068!3.05e-25!52;UBERON:0006241!3.05e-25!52;UBERON:0007135!3.05e-25!52;UBERON:0000955!1.40e-23!50;UBERON:0006238!1.40e-23!50;UBERON:0002616!2.27e-23!49;UBERON:0000033!3.91e-23!63;UBERON:0002346!2.71e-20!71;UBERON:0003075!2.71e-20!71;UBERON:0007284!2.71e-20!71;UBERON:0003080!1.25e-19!40;UBERON:0002780!4.56e-19!39;UBERON:0001890!4.56e-19!39;UBERON:0006240!4.56e-19!39;UBERON:0003056!4.63e-19!49;UBERON:0004121!5.75e-19!102;UBERON:0000924!5.75e-19!102;UBERON:0006601!5.75e-19!102;UBERON:0002020!7.46e-19!34;UBERON:0002791!8.16e-16!29;UBERON:0003528!8.16e-16!29;UBERON:0001893!8.16e-16!29;UBERON:0000956!4.77e-11!21;UBERON:0001869!4.77e-11!21;UBERON:0000203!4.77e-11!21;UBERON:0000153!9.10e-10!94;UBERON:0007811!1.48e-09!86;UBERON:0002619!1.62e-09!17;UBERON:0004111!5.86e-09!122;UBERON:0000025!5.89e-09!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.25e-28,73;UBERON:0000073,1.19e-26,54;UBERON:0001016,3.21e-26,75;UBERON:0001049,3.05e-25,52;UBERON:0005068,3.05e-25,52;UBERON:0006241,3.05e-25,52;UBERON:0007135,3.05e-25,52;UBERON:0002346,2.60e-23,64;UBERON:0003075,2.60e-23,64;UBERON:0007284,2.60e-23,64;UBERON:0000955,1.08e-21,47;UBERON:0006238,1.08e-21,47;UBERON:0002616,1.73e-21,46;UBERON:0004121,5.71e-21,95;UBERON:0000924,5.71e-21,95;UBERON:0006601,5.71e-21,95;UBERON:0003080,1.25e-19,40;UBERON:0002780,4.56e-19,39;UBERON:0001890,4.56e-19,39;UBERON:0006240,4.56e-19,39;UBERON:0003056,4.63e-19,49;UBERON:0002020,7.46e-19,34;UBERON:0010371,8.67e-19,73;UBERON:0010314,8.30e-18,92;UBERON:0003528,8.16e-16,29;UBERON:0002791,8.16e-16,29;UBERON:0001893,8.16e-16,29;UBERON:0000956,4.77e-11,21;UBERON:0001869,4.77e-11,21;UBERON:0000203,4.77e-11,21;UBERON:0002619,1.62e-09,17;UBERON:0004111,5.86e-09,122;UBERON:0000025,5.89e-09,114 | |||
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| ||
|short_description=p1@Eri3 | |short_description=p1@Eri3 | ||
}} | }} |
Revision as of 03:40, 14 November 2012
Short description: | p1@Eri3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Eri3_5end |
Coexpression cluster: | MCL_coexpression_mm9:794 |
Association with transcript: | 0bp_to_ENSMUST00000037127, ENSMUST00000171329_5end |
EntrezGene: | Eri3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.12e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.12e-14 | 23 |
ectodermal cell | 4.28e-12 | 44 |
neurectodermal cell | 4.28e-12 | 44 |
neural cell | 8.26e-12 | 43 |
neuron | 6.47e-10 | 33 |
neuronal stem cell | 6.47e-10 | 33 |
neuroblast | 6.47e-10 | 33 |
electrically signaling cell | 6.47e-10 | 33 |
electrically responsive cell | 2.36e-08 | 39 |
electrically active cell | 2.36e-08 | 39 |
embryonic cell | 1.24e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.25e-28 | 73 |
regional part of nervous system | 1.19e-26 | 54 |
nervous system | 3.21e-26 | 75 |
neural tube | 3.05e-25 | 52 |
neural rod | 3.05e-25 | 52 |
future spinal cord | 3.05e-25 | 52 |
neural keel | 3.05e-25 | 52 |
neurectoderm | 2.60e-23 | 64 |
neural plate | 2.60e-23 | 64 |
presumptive neural plate | 2.60e-23 | 64 |
brain | 1.08e-21 | 47 |
future brain | 1.08e-21 | 47 |
regional part of brain | 1.73e-21 | 46 |
ectoderm-derived structure | 5.71e-21 | 95 |
ectoderm | 5.71e-21 | 95 |
presumptive ectoderm | 5.71e-21 | 95 |
anterior neural tube | 1.25e-19 | 40 |
regional part of forebrain | 4.56e-19 | 39 |
forebrain | 4.56e-19 | 39 |
future forebrain | 4.56e-19 | 39 |
pre-chordal neural plate | 4.63e-19 | 49 |
gray matter | 7.46e-19 | 34 |
ecto-epithelium | 8.67e-19 | 73 |
structure with developmental contribution from neural crest | 8.30e-18 | 92 |
brain grey matter | 8.16e-16 | 29 |
regional part of telencephalon | 8.16e-16 | 29 |
telencephalon | 8.16e-16 | 29 |
cerebral cortex | 4.77e-11 | 21 |
cerebral hemisphere | 4.77e-11 | 21 |
pallium | 4.77e-11 | 21 |
regional part of cerebral cortex | 1.62e-09 | 17 |
anatomical conduit | 5.86e-09 | 122 |
tube | 5.89e-09 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.