FFCP PHASE1:Mm9::chr4:43394966..43395010,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr4:43394966..43395010,+ | |id=chr4:43394966..43395010,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.16e-09!50;CL:0002319!1.57e-08!43;CL:0000117!1.86e-08!23;CL:0000337!1.86e-08!23;CL:0000221!3.39e-08!44;CL:0000133!3.39e-08!44;CL:0000393!1.63e-07!39;CL:0000211!1.63e-07!39;CL:0000540!2.49e-07!33;CL:0000047!2.49e-07!33;CL:0000031!2.49e-07!33;CL:0000404!2.49e-07!33 | |ontology_enrichment_celltype=CL:0000055!5.16e-09!50;CL:0002319!1.57e-08!43;CL:0000117!1.86e-08!23;CL:0000337!1.86e-08!23;CL:0000221!3.39e-08!44;CL:0000133!3.39e-08!44;CL:0000393!1.63e-07!39;CL:0000211!1.63e-07!39;CL:0000540!2.49e-07!33;CL:0000047!2.49e-07!33;CL:0000031!2.49e-07!33;CL:0000404!2.49e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.62e-09,23;CL:0000337,9.62e-09,23;CL:0002319,1.41e-08,43;CL:0000221,5.35e-08,44;CL:0000133,5.35e-08,44;CL:0000393,1.58e-07,39;CL:0000211,1.58e-07,39;CL:0000540,2.54e-07,33;CL:0000047,2.54e-07,33;CL:0000031,2.54e-07,33;CL:0000404,2.54e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.92e-20!75;UBERON:0001016!2.92e-20!75;UBERON:0001017!1.75e-19!73;UBERON:0005743!1.75e-19!73;UBERON:0001049!7.77e-17!52;UBERON:0005068!7.77e-17!52;UBERON:0006241!7.77e-17!52;UBERON:0007135!7.77e-17!52;UBERON:0000955!1.46e-15!50;UBERON:0006238!1.46e-15!50;UBERON:0004121!1.60e-15!102;UBERON:0000924!1.60e-15!102;UBERON:0006601!1.60e-15!102;UBERON:0002616!6.20e-15!49;UBERON:0002020!1.40e-14!34;UBERON:0000025!1.89e-14!114;UBERON:0002346!5.51e-14!71;UBERON:0003075!5.51e-14!71;UBERON:0007284!5.51e-14!71;UBERON:0000033!2.43e-13!63;UBERON:0004111!1.33e-12!122;UBERON:0002791!9.04e-12!29;UBERON:0003528!9.04e-12!29;UBERON:0001893!9.04e-12!29;UBERON:0003080!3.62e-11!40;UBERON:0002780!1.31e-10!39;UBERON:0001890!1.31e-10!39;UBERON:0006240!1.31e-10!39;UBERON:0003056!1.45e-10!49;UBERON:0000468!6.03e-09!333;UBERON:0002619!5.94e-08!17;UBERON:0000956!6.12e-08!21;UBERON:0001869!6.12e-08!21;UBERON:0000203!6.12e-08!21;UBERON:0002021!1.39e-07!10;UBERON:0000411!1.39e-07!10;UBERON:0001950!1.39e-07!10;UBERON:0003076!8.16e-07!12;UBERON:0003057!8.16e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!2.92e-20!75;UBERON:0001016!2.92e-20!75;UBERON:0001017!1.75e-19!73;UBERON:0005743!1.75e-19!73;UBERON:0001049!7.77e-17!52;UBERON:0005068!7.77e-17!52;UBERON:0006241!7.77e-17!52;UBERON:0007135!7.77e-17!52;UBERON:0000955!1.46e-15!50;UBERON:0006238!1.46e-15!50;UBERON:0004121!1.60e-15!102;UBERON:0000924!1.60e-15!102;UBERON:0006601!1.60e-15!102;UBERON:0002616!6.20e-15!49;UBERON:0002020!1.40e-14!34;UBERON:0000025!1.89e-14!114;UBERON:0002346!5.51e-14!71;UBERON:0003075!5.51e-14!71;UBERON:0007284!5.51e-14!71;UBERON:0000033!2.43e-13!63;UBERON:0004111!1.33e-12!122;UBERON:0002791!9.04e-12!29;UBERON:0003528!9.04e-12!29;UBERON:0001893!9.04e-12!29;UBERON:0003080!3.62e-11!40;UBERON:0002780!1.31e-10!39;UBERON:0001890!1.31e-10!39;UBERON:0006240!1.31e-10!39;UBERON:0003056!1.45e-10!49;UBERON:0000468!6.03e-09!333;UBERON:0002619!5.94e-08!17;UBERON:0000956!6.12e-08!21;UBERON:0001869!6.12e-08!21;UBERON:0000203!6.12e-08!21;UBERON:0002021!1.39e-07!10;UBERON:0000411!1.39e-07!10;UBERON:0001950!1.39e-07!10;UBERON:0003076!8.16e-07!12;UBERON:0003057!8.16e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.62e-20,75;UBERON:0001017,2.28e-19,73;UBERON:0000073,7.34e-18,54;UBERON:0001049,6.99e-17,52;UBERON:0005068,6.99e-17,52;UBERON:0006241,6.99e-17,52;UBERON:0007135,6.99e-17,52;UBERON:0002346,1.03e-15,64;UBERON:0003075,1.03e-15,64;UBERON:0007284,1.03e-15,64;UBERON:0004121,1.07e-15,95;UBERON:0000924,1.07e-15,95;UBERON:0006601,1.07e-15,95;UBERON:0002020,4.03e-15,34;UBERON:0000955,5.23e-14,47;UBERON:0006238,5.23e-14,47;UBERON:0010314,8.66e-14,92;UBERON:0000025,1.69e-13,114;UBERON:0002616,2.22e-13,46;UBERON:0003528,3.41e-12,29;UBERON:0002791,3.41e-12,29;UBERON:0001893,3.41e-12,29;UBERON:0010371,3.23e-11,73;UBERON:0004111,3.56e-11,122;UBERON:0003080,4.81e-11,40;UBERON:0002780,1.79e-10,39;UBERON:0001890,1.79e-10,39;UBERON:0006240,1.79e-10,39;UBERON:0003056,2.50e-10,49;UBERON:0002619,3.22e-08,17;UBERON:0000956,3.32e-08,21;UBERON:0001869,3.32e-08,21;UBERON:0000203,3.32e-08,21;UBERON:0002021,7.78e-08,10;UBERON:0000411,7.78e-08,10;UBERON:0001950,7.78e-08,10;UBERON:0003076,4.92e-07,12;UBERON:0003057,4.92e-07,12 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,3.14660173558958,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,2.12891555560981,1.46837401729345,1.56478268869608,4.36050312760893,2.85592037554813,2.72201858703997,2.09979632438044,1.43752564364972,0,0,0,2.57259436035947,2.57880095944881,4.12537673821954,5.05791152148994,4.7609188134483,7.60597684207415,2.71075625655306,0.889294796111139,2.2497492932035,3.9554654502679,5.6838409195688,2.99600110518405,2.68952813725088,2.59224030771194,1.75507719831198,1.47227472945967,13.4255962669788,6.18431914664518,1.83736198822431,2.58782771749238,1.83843757322004,5.50579404996943,7.53355294702608,7.68032666281217,6.4624280987795,8.78281378583133,6.25096044668112,5.30447698102624,6.19038871034848,7.63991238884051,8.54422897873636,7.68807076315156,8.76077395378913,3.3319525066601,5.44115232768856,2.6087803983151,3.44169550792555,2.03991400112325,0.539703191637817,1.94932925234301,2.24013443548668,0.842666520790511,1.36344258062446,1.03914401841148,1.41335829804136,0.985903938436763,2.56652954828636,5.09610479413291,21.3320010945999,0.865964164044856,1.52015919285059,1.01104889002957,1.25602267690966,0.517875767294343,2.07818994690755,1.04091196059682,0.913396434936424,1.38369298353635,0.904335843315735,2.4693628498498,0.753999547978053,5.43828929015623,4.19338135067744,0,3.23533699894818,1.10420759230197,0.484875253135222,0,8.78342391034641,5.86450779077674,1.27728527604296,0,0,0,9.73639156131348,5.03250663100489,9.67538511269056,12.8629996942285,14.5757810678288,9.55825004973976,11.1946471516753,3.86989582631202,0.746441823660558,0.252722758433675,1.68353484709179,0.650602214813519,1.60931473103431,1.44049703844279,2.41127708537144,3.53789795586905,2.0498195245576,2.62364828767241,2.58703370739016,0.215567992932842,1.51284864134255,1.23165786914764,0.657587197282725,0.556094498451196,1.39300866608867,2.05782136407943,1.19420560091096,0,0,0,2.27838349789052,1.40715635988658,1.44049649168812,2.60419209143731,1.57411385397923,1.85120535464854,1.86027155800326,1.60964040839772,4.67061369468678,1.81015834904829,1.47750717671186,3.64809642956351,3.50879969820798,2.85415149878366,3.48936688776967,7.57043814830858,7.9236551532049,0,0.264450566663544,1.2797295032114,1.85789337488351,1.28867461322093,1.61346819698674,1.55664630691409,2.09248188723815,1.42358718463353,1.4822905925161,1.50801125280162,1.98956472041151,1.16978452271472,0,1.08069024937347,0.398282546508734,0.569003702859245,0.685491075658373,0,1.01825663922657,0.775809948670503,2.94570443539338,2.33975187359752,1.32849133181642,1.56998727841375,0.863780147452604,1.1858105083486,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,3.16465751195892,1.29708181420028,1.09824565275233,0,0.372140947668503,0.936113019343682,1.01031551178845,0.717589654087649,0.482443521363367,6.83586803616437,1.32643988239339,0.814824882210129,1.18821560042632,1.40814148973101,4.35516269348721,7.85544014923845,13.4642217021881,4.25614889086716,5.09368786192182,5.26200736569707,7.04612253277673,4.48980952851328,6.79850575333104,1.50791283939272,2.17562273527484,0.491764273019036,0.551873492609465,9.47248480927973,9.72856998715286,0.819674726883377,3.02965112645248,1.26203287766503,2.34263246577983,2.36965737506079,1.91175038362042,2.67358408898873,2.26461224631066,2.02405350837447,1.75353514746787,1.97643888973262,11.2462460747632,3.40656204499845,3.73937767701236,3.58351310577867,3.79431282836832,1.32745138339963,0.242780636154981,1.81394134178851,0,0,0.614870295887855,2.06742634534577,1.09060118843252,0.712994756769443,0.948110273807448,0,1.03135543248187,2.38307724027652,0.900305470156551,0.905510786479282,1.28602221018955,1.24138163549592,1.96205699362278,2.46823530903181,1.522324745573,1.17335854031855,4.2366414172764,0.882113592219848,2.63818004706368,0.968786560175433,0.904693873922338,0.596861720015682,1.14898629821543,0.874442509889552,10.0129663085675,0.341741761595705,1.857481811669,1.66675074632741,0.753473828018764,0.136694227721025,0.457556346413045,0.339956859987711,0.419854356970974,0.552799895217695,1.90934123603023,0.474503990371703,1.62655573701479,0.972048067396211,2.92723614420256,0.436725127492355,1.88810084938749,2.47960367176008,0.26175594198403,1.16653475962614,0,5.6369293868419,1.49516546043979,1.32366792365678,2.91676782516071,2.32487682259916,1.18269287843545,4.3422178298929,2.73429208172295,1.78260885523708,1.93267296660805,2.59227005632079,0,0.202725215290164,0.102710957164827,0.25984164595559,0.716106782669926,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0,2.72076460338254,1.33191572024439,0.538283139656854,0.671538465456314,2.31827512838629,1.87682475451182,2.01466786693992,0.214368379079066,0.501572104035363,18.6368108063632,16.5717085142584,13.1765968091061,17.1853182343688,6.85082519770642,6.0431511791176,15.5255175053315,10.3573876741571,10.8754178156209,9.31968561153276,0.93408612825759,2.39414924040619,2.04880326904961,3.16038732188782,2.09613162627982,2.94149613520023,1.77797382241292,3.5025959730612,3.20919209591815,3.03236654116557,3.8021894983536,3.2066478035633,3.46473577638565,3.77748399188729,4.307660171671,4.28664322154766,5.2147946675185,2.89363830695558,1.64834360321323,2.35518272215036,4.80016953339582,1.59728225543404,3.57654284920981,3.77900683244054,2.82328141245992,2.5384382367503,3.29270351170991,1.8414879800649,2.98769050460896,2.80571135828869,2.72860541685601,4.0386837773981,2.45538625901814,3.56354734727722,2.50778594275484,7.24450676020043,3.50897412668113,2.79332370262788,5.35607329792761,3.08827986767322,2.08681052058379 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,3.14660173558958,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,2.12891555560981,1.46837401729345,1.56478268869608,4.36050312760893,2.85592037554813,2.72201858703997,2.09979632438044,1.43752564364972,0,0,0,2.57259436035947,2.57880095944881,4.12537673821954,5.05791152148994,4.7609188134483,7.60597684207415,2.71075625655306,0.889294796111139,2.2497492932035,3.9554654502679,5.6838409195688,2.99600110518405,2.68952813725088,2.59224030771194,1.75507719831198,1.47227472945967,13.4255962669788,6.18431914664518,1.83736198822431,2.58782771749238,1.83843757322004,5.50579404996943,7.53355294702608,7.68032666281217,6.4624280987795,8.78281378583133,6.25096044668112,5.30447698102624,6.19038871034848,7.63991238884051,8.54422897873636,7.68807076315156,8.76077395378913,3.3319525066601,5.44115232768856,2.6087803983151,3.44169550792555,2.03991400112325,0.539703191637817,1.94932925234301,2.24013443548668,0.842666520790511,1.36344258062446,1.03914401841148,1.41335829804136,0.985903938436763,2.56652954828636,5.09610479413291,21.3320010945999,0.865964164044856,1.52015919285059,1.01104889002957,1.25602267690966,0.517875767294343,2.07818994690755,1.04091196059682,0.913396434936424,1.38369298353635,0.904335843315735,2.4693628498498,0.753999547978053,5.43828929015623,4.19338135067744,0,3.23533699894818,1.10420759230197,0.484875253135222,0,8.78342391034641,5.86450779077674,1.27728527604296,0,0,0,9.73639156131348,5.03250663100489,9.67538511269056,12.8629996942285,14.5757810678288,9.55825004973976,11.1946471516753,3.86989582631202,0.746441823660558,0.252722758433675,1.68353484709179,0.650602214813519,1.60931473103431,1.44049703844279,2.41127708537144,3.53789795586905,2.0498195245576,2.62364828767241,2.58703370739016,0.215567992932842,1.51284864134255,1.23165786914764,0.657587197282725,0.556094498451196,1.39300866608867,2.05782136407943,1.19420560091096,0,0,0,2.27838349789052,1.40715635988658,1.44049649168812,2.60419209143731,1.57411385397923,1.85120535464854,1.86027155800326,1.60964040839772,4.67061369468678,1.81015834904829,1.47750717671186,3.64809642956351,3.50879969820798,2.85415149878366,3.48936688776967,7.57043814830858,7.9236551532049,0,0.264450566663544,1.2797295032114,1.85789337488351,1.28867461322093,1.61346819698674,1.55664630691409,2.09248188723815,1.42358718463353,1.4822905925161,1.50801125280162,1.98956472041151,1.16978452271472,0,1.08069024937347,0.398282546508734,0.569003702859245,0.685491075658373,0,1.01825663922657,0.775809948670503,2.94570443539338,2.33975187359752,1.32849133181642,1.56998727841375,0.863780147452604,1.1858105083486,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,3.16465751195892,1.29708181420028,1.09824565275233,0,0.372140947668503,0.936113019343682,1.01031551178845,0.717589654087649,0.482443521363367,6.83586803616437,1.32643988239339,0.814824882210129,1.18821560042632,1.40814148973101,4.35516269348721,7.85544014923845,13.4642217021881,4.25614889086716,5.09368786192182,5.26200736569707,7.04612253277673,4.48980952851328,6.79850575333104,1.50791283939272,2.17562273527484,0.491764273019036,0.551873492609465,9.47248480927973,9.72856998715286,0.819674726883377,3.02965112645248,1.26203287766503,2.34263246577983,2.36965737506079,1.91175038362042,2.67358408898873,2.26461224631066,2.02405350837447,1.75353514746787,1.97643888973262,11.2462460747632,3.40656204499845,3.73937767701236,3.58351310577867,3.79431282836832,1.32745138339963,0.242780636154981,1.81394134178851,0,0,0.614870295887855,2.06742634534577,1.09060118843252,0.712994756769443,0.948110273807448,0,1.03135543248187,2.38307724027652,0.900305470156551,0.905510786479282,1.28602221018955,1.24138163549592,1.96205699362278,2.46823530903181,1.522324745573,1.17335854031855,4.2366414172764,0.882113592219848,2.63818004706368,0.968786560175433,0.904693873922338,0.596861720015682,1.14898629821543,0.874442509889552,10.0129663085675,0.341741761595705,1.857481811669,1.66675074632741,0.753473828018764,0.136694227721025,0.457556346413045,0.339956859987711,0.419854356970974,0.552799895217695,1.90934123603023,0.474503990371703,1.62655573701479,0.972048067396211,2.92723614420256,0.436725127492355,1.88810084938749,2.47960367176008,0.26175594198403,1.16653475962614,0,5.6369293868419,1.49516546043979,1.32366792365678,2.91676782516071,2.32487682259916,1.18269287843545,4.3422178298929,2.73429208172295,1.78260885523708,1.93267296660805,2.59227005632079,0,0.202725215290164,0.102710957164827,0.25984164595559,0.716106782669926,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0,2.72076460338254,1.33191572024439,0.538283139656854,0.671538465456314,2.31827512838629,1.87682475451182,2.01466786693992,0.214368379079066,0.501572104035363,18.6368108063632,16.5717085142584,13.1765968091061,17.1853182343688,6.85082519770642,6.0431511791176,15.5255175053315,10.3573876741571,10.8754178156209,9.31968561153276,0.93408612825759,2.39414924040619,2.04880326904961,3.16038732188782,2.09613162627982,2.94149613520023,1.77797382241292,3.5025959730612,3.20919209591815,3.03236654116557,3.8021894983536,3.2066478035633,3.46473577638565,3.77748399188729,4.307660171671,4.28664322154766,5.2147946675185,2.89363830695558,1.64834360321323,2.35518272215036,4.80016953339582,1.59728225543404,3.57654284920981,3.77900683244054,2.82328141245992,2.5384382367503,3.29270351170991,1.8414879800649,2.98769050460896,2.80571135828869,2.72860541685601,4.0386837773981,2.45538625901814,3.56354734727722,2.50778594275484,7.24450676020043,3.50897412668113,2.79332370262788,5.35607329792761,3.08827986767322,2.08681052058379 | ||
|short_description=p3@Rusc2 | |short_description=p3@Rusc2 | ||
}} | }} |
Revision as of 10:47, 14 November 2012
Short description: | p3@Rusc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rusc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 24bp_to_ENSMUST00000131037_5end |
EntrezGene: | Rusc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.62e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.62e-09 | 23 |
neural cell | 1.41e-08 | 43 |
ectodermal cell | 5.35e-08 | 44 |
neurectodermal cell | 5.35e-08 | 44 |
electrically responsive cell | 1.58e-07 | 39 |
electrically active cell | 1.58e-07 | 39 |
neuron | 2.54e-07 | 33 |
neuronal stem cell | 2.54e-07 | 33 |
neuroblast | 2.54e-07 | 33 |
electrically signaling cell | 2.54e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.