FFCP PHASE1:Mm9::chr11:77306767..77306804,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:77306767..77306804,+ | |id=chr11:77306767..77306804,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.40e-12!23;CL:0000337!6.40e-12!23;CL:0000221!2.52e-11!44;CL:0000133!2.52e-11!44;CL:0002319!6.30e-11!43;CL:0000540!2.85e-09!33;CL:0000047!2.85e-09!33;CL:0000031!2.85e-09!33;CL:0000404!2.85e-09!33;CL:0000055!1.53e-08!50;CL:0000393!1.68e-07!39;CL:0000211!1.68e-07!39 | |ontology_enrichment_celltype=CL:0000117!6.40e-12!23;CL:0000337!6.40e-12!23;CL:0000221!2.52e-11!44;CL:0000133!2.52e-11!44;CL:0002319!6.30e-11!43;CL:0000540!2.85e-09!33;CL:0000047!2.85e-09!33;CL:0000031!2.85e-09!33;CL:0000404!2.85e-09!33;CL:0000055!1.53e-08!50;CL:0000393!1.68e-07!39;CL:0000211!1.68e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.40e-12,23;CL:0000337,6.40e-12,23;CL:0000221,2.52e-11,44;CL:0000133,2.52e-11,44;CL:0002319,6.30e-11,43;CL:0000540,2.85e-09,33;CL:0000047,2.85e-09,33;CL:0000031,2.85e-09,33;CL:0000404,2.85e-09,33;CL:0000393,1.68e-07,39;CL:0000211,1.68e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.12e-25!75;UBERON:0001016!8.12e-25!75;UBERON:0001017!6.95e-24!73;UBERON:0005743!6.95e-24!73;UBERON:0004121!4.21e-22!102;UBERON:0000924!4.21e-22!102;UBERON:0006601!4.21e-22!102;UBERON:0001049!1.17e-21!52;UBERON:0005068!1.17e-21!52;UBERON:0006241!1.17e-21!52;UBERON:0007135!1.17e-21!52;UBERON:0000955!4.07e-21!50;UBERON:0006238!4.07e-21!50;UBERON:0000033!6.60e-21!63;UBERON:0002616!1.96e-20!49;UBERON:0002020!4.03e-18!34;UBERON:0002346!3.26e-17!71;UBERON:0003075!3.26e-17!71;UBERON:0007284!3.26e-17!71;UBERON:0003080!1.21e-16!40;UBERON:0007811!2.40e-16!86;UBERON:0002780!3.86e-16!39;UBERON:0001890!3.86e-16!39;UBERON:0006240!3.86e-16!39;UBERON:0003056!4.52e-16!49;UBERON:0002791!7.93e-16!29;UBERON:0003528!7.93e-16!29;UBERON:0001893!7.93e-16!29;UBERON:0000153!6.03e-15!94;UBERON:0000956!5.48e-12!21;UBERON:0001869!5.48e-12!21;UBERON:0000203!5.48e-12!21;UBERON:0002619!2.87e-10!17;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10;UBERON:0000025!2.19e-07!114;UBERON:0004111!3.68e-07!122 | |ontology_enrichment_uberon=UBERON:0000073!8.12e-25!75;UBERON:0001016!8.12e-25!75;UBERON:0001017!6.95e-24!73;UBERON:0005743!6.95e-24!73;UBERON:0004121!4.21e-22!102;UBERON:0000924!4.21e-22!102;UBERON:0006601!4.21e-22!102;UBERON:0001049!1.17e-21!52;UBERON:0005068!1.17e-21!52;UBERON:0006241!1.17e-21!52;UBERON:0007135!1.17e-21!52;UBERON:0000955!4.07e-21!50;UBERON:0006238!4.07e-21!50;UBERON:0000033!6.60e-21!63;UBERON:0002616!1.96e-20!49;UBERON:0002020!4.03e-18!34;UBERON:0002346!3.26e-17!71;UBERON:0003075!3.26e-17!71;UBERON:0007284!3.26e-17!71;UBERON:0003080!1.21e-16!40;UBERON:0007811!2.40e-16!86;UBERON:0002780!3.86e-16!39;UBERON:0001890!3.86e-16!39;UBERON:0006240!3.86e-16!39;UBERON:0003056!4.52e-16!49;UBERON:0002791!7.93e-16!29;UBERON:0003528!7.93e-16!29;UBERON:0001893!7.93e-16!29;UBERON:0000153!6.03e-15!94;UBERON:0000956!5.48e-12!21;UBERON:0001869!5.48e-12!21;UBERON:0000203!5.48e-12!21;UBERON:0002619!2.87e-10!17;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10;UBERON:0000025!2.19e-07!114;UBERON:0004111!3.68e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.10e-25,75;UBERON:0004121,1.45e-24,95;UBERON:0000924,1.45e-24,95;UBERON:0006601,1.45e-24,95;UBERON:0001017,6.93e-24,73;UBERON:0000073,6.29e-23,54;UBERON:0001049,1.17e-21,52;UBERON:0005068,1.17e-21,52;UBERON:0006241,1.17e-21,52;UBERON:0007135,1.17e-21,52;UBERON:0002346,4.53e-20,64;UBERON:0003075,4.53e-20,64;UBERON:0007284,4.53e-20,64;UBERON:0010371,8.06e-20,73;UBERON:0000955,3.01e-19,47;UBERON:0006238,3.01e-19,47;UBERON:0002616,1.40e-18,46;UBERON:0002020,4.03e-18,34;UBERON:0003080,1.21e-16,40;UBERON:0002780,3.85e-16,39;UBERON:0001890,3.85e-16,39;UBERON:0006240,3.85e-16,39;UBERON:0003056,4.52e-16,49;UBERON:0010314,6.45e-16,92;UBERON:0003528,7.92e-16,29;UBERON:0002791,7.92e-16,29;UBERON:0001893,7.92e-16,29;UBERON:0000956,5.48e-12,21;UBERON:0001869,5.48e-12,21;UBERON:0000203,5.48e-12,21;UBERON:0002619,2.87e-10,17;UBERON:0002021,9.30e-08,10;UBERON:0000411,9.30e-08,10;UBERON:0001950,9.30e-08,10;UBERON:0000025,2.21e-07,114;UBERON:0004111,3.70e-07,122 | |||
|phase1_expression=7.68714466103011,1.04692622291808,1.36499771816861,2.72217790176147,1.50268718983904,4.36486106970913,3.73780224952841,3.61545305636414,6.05391505252167,6.55380673701582,6.16384685611818,7.81767158154297,2.56801094896809,3.3219752919219,2.33176833270964,2.42970320867791,3.49780939064073,5.0473946457318,3.29074640653773,4.2438965179803,2.97651515528744,4.26951090163807,3.6567970479451,1.59992422793407,1.37645568640302,1.14846392823004,2.15380998079537,2.80112602491656,2.28028103347649,1.26015064879965,1.77384408524244,6.35030673459631,3.69038872550742,15.8481681015439,3.75507105676657,2.99222361645286,3.47087905646027,0.418531630736908,0,1.57057123192139,1.76469446409304,2.04913645487534,2.91306211818692,3.65100772129174,5.37297735463427,4.9557623083654,17.2126095756569,4.36050312760893,5.05278220289285,6.9994763666742,6.01941612989059,4.31257693094915,3.85899993932794,7.25362142011344,6.04968838456435,2.82985379639542,3.72493471920384,2.06268836910977,11.3297218081375,13.7537654610729,12.0427966666174,7.11573517345177,6.22506357277798,12.1486461832989,6.92206453796882,7.8152812644071,6.89080254192331,4.99483796918021,6.73982480005105,9.31540974488665,10.0955981448663,9.71213346972932,9.49734726091938,8.32937434661688,9.29701068876893,14.7075005857603,14.3150645299205,14.0456071893706,11.5204899942183,13.4524013484798,10.9785172322892,7.8137005583514,14.2383329490704,6.75315132038016,11.6126668310376,10.3120004915784,9.39653093274079,8.20157561631323,11.8132861599767,7.02815508993105,4.92769630792852,1.72084775396277,0.679971333707751,0,0.649776417447669,0.896053774194671,1.26399978118577,3.06774580640504,1.55871602761721,2.47337702157238,8.59144860637751,2.56652954828636,12.7402619853323,14.2213340630666,3.68034769719064,3.80039798212648,2.02209778005913,1.82694207550496,0.517875767294343,3.41416919849097,5.20455980298408,2.13125834818499,3.45923245884088,3.46662073271032,4.23319345688537,3.51866455723091,8.15743393523434,1.73519228303894,2.65383165584962,4.04417124868523,2.20841518460394,0.969750506270444,0,7.61230072230023,7.12118803165747,1.78819938646014,4.79260498023681,4.79922184794726,3.55796635804581,10.3355541189328,11.4375150704657,12.6910895633993,23.292458905765,19.6900902144355,11.4283424507758,12.3303359931496,8.96186401882783,3.35898820647251,4.54900965180614,3.36706969418358,4.68433594665733,4.82794419310293,5.76198815377118,3.61691562805716,7.48401490664606,5.38077625196369,6.37171727006156,5.69147415625834,3.88022387279116,4.72765200419548,4.39877810409872,6.79506770525482,4.44875598760957,4.52727816478817,2.26360350048738,5.9710280045548,4.21327912387941,3.86021860672073,3.9782889915383,5.59239585845855,7.97388603935727,4.32148947506436,2.84093682702252,4.72234156193769,4.9365476123961,3.72054311600653,4.82892122519315,6.65562451492866,7.24063339619314,4.26835406605648,5.18840381093477,3.65499968563331,3.95190207523891,3.35516046900929,14.5100064509248,12.4514580978934,0.991256348951394,0.793351699990633,4.47905326123991,2.55460339046482,3.60828891701861,4.84040459096022,5.11469500843202,3.80451252225118,2.37264530772256,4.44687177754829,3.51869292320377,4.97391180102877,3.11942539390592,2.69645822596266,2.16138049874694,2.19055400579804,5.50036912763937,4.22719496655997,5.63538678365402,3.25842124552503,3.29719228184964,5.61086559122549,7.3986748435381,5.01874503130647,2.98297582898612,1.85095745882701,1.48226313543574,3.33690211432188,1.76903095601883,2.47348323623339,2.43432145666204,3.13530307678142,1.2731292589071,1.43848068725405,3.40483976227574,1.09824565275233,7.18841032636773,3.34926852901653,1.87222603868736,2.77836765741823,1.25578189465339,0.482443521363367,3.8798169934987,4.54779388249163,3.58522948172457,5.43184274480602,4.45911471748154,3.85264392116176,7.61739650835244,8.97614780145875,6.30540576424764,8.63712289630222,7.65382889555938,3.60499292374624,3.62638461918381,4.48412081602686,0,2.71952841909355,2.95058563811422,2.48343071674259,11.8807436590966,7.73597131508541,4.91804836130026,3.53459298086122,2.52406575533005,5.0757036758563,4.09304455692318,1.43381278771531,6.68396022247182,7.64306633129848,2.83367491172426,5.26060544240361,3.95287777946523,14.7807805554031,3.97432238583152,7.12262414669021,10.2618784392753,4.45419332025846,2.65490276679926,3.39892890616974,2.72091201268276,3.01768127609437,4.72483028609236,3.3817866273832,1.80899805217755,2.90826983582004,4.63446591900138,2.52829406348653,3.16255825724996,5.15677716240934,5.10659408630682,1.98067203434441,7.89087971074802,6.00143698088458,5.14286677562593,7.13475270408282,4.27827453565514,6.69822888052118,4.4587624532105,10.3797714723272,2.20528398054962,5.11147384118588,5.8127193610526,5.60910201831849,4.17803204010978,6.23735419031233,1.45740418314925,12.9797711407357,1.87957968877638,6.60437977482312,1.48155621895769,2.26042148405629,1.6403307326523,3.43167259809784,7.64902934972349,7.41742697315387,6.63359874261234,1.90934123603023,5.69404788446044,5.28630614529807,3.24016022465404,2.71814784818809,1.9652630737156,4.45052343069908,6.11635572367486,1.30877970992015,2.59229946583586,3.72803587852155,2.81846469342095,5.83114529571517,3.14371131868485,8.16694991045,6.32883135040882,4.05494701177868,5.8678619322877,7.94246747548096,7.96931017635402,6.03960302065015,4.89651010638371,3.47612232690996,1.82452693761148,4.00572732942826,3.37794139742267,3.93858730468459,2.38417625737518,3.60586348559907,3.69223817936443,3.63479219813331,5.18206285253999,4.2346997757473,3.70339946811059,4.42574471545516,3.3894301632655,4.53460767230423,5.99362074109975,3.13998498133165,4.36500002546604,3.86379188064381,3.75364950902364,2.38097111547445,4.28736758158132,2.50786052017682,16.3778034358949,11.5081309126794,12.0308057822273,12.8889886757766,21.9226406326606,21.9064230243013,24.9758325085768,22.9663813644352,21.7508356312418,26.4057758993428,4.56664329370377,8.37952234142165,4.43907374960749,6.80698807791223,5.8691685535835,7.35374033800057,3.55594764482584,3.29656091582231,3.20919209591815,4.04315538822076,2.02783439912192,3.58390048633545,3.55837728385553,4.41773551593598,3.56099907524802,3.33405583898152,3.47652977834566,6.36600427530227,4.53294490883637,2.94397840268795,3.08582327146874,2.66213709239006,3.81497903915713,3.92435324907287,2.1645157495526,3.55381353145041,2.0122077016005,2.63069711437843,4.07412341537585,2.80571135828869,4.62676570684279,3.84167481264697,2.04615521584845,4.49316839439301,4.62975866354739,7.99393849401427,5.38042699424439,5.37177635120746,8.60797494309795,5.51478547798789,2.31867835620421 | |phase1_expression=7.68714466103011,1.04692622291808,1.36499771816861,2.72217790176147,1.50268718983904,4.36486106970913,3.73780224952841,3.61545305636414,6.05391505252167,6.55380673701582,6.16384685611818,7.81767158154297,2.56801094896809,3.3219752919219,2.33176833270964,2.42970320867791,3.49780939064073,5.0473946457318,3.29074640653773,4.2438965179803,2.97651515528744,4.26951090163807,3.6567970479451,1.59992422793407,1.37645568640302,1.14846392823004,2.15380998079537,2.80112602491656,2.28028103347649,1.26015064879965,1.77384408524244,6.35030673459631,3.69038872550742,15.8481681015439,3.75507105676657,2.99222361645286,3.47087905646027,0.418531630736908,0,1.57057123192139,1.76469446409304,2.04913645487534,2.91306211818692,3.65100772129174,5.37297735463427,4.9557623083654,17.2126095756569,4.36050312760893,5.05278220289285,6.9994763666742,6.01941612989059,4.31257693094915,3.85899993932794,7.25362142011344,6.04968838456435,2.82985379639542,3.72493471920384,2.06268836910977,11.3297218081375,13.7537654610729,12.0427966666174,7.11573517345177,6.22506357277798,12.1486461832989,6.92206453796882,7.8152812644071,6.89080254192331,4.99483796918021,6.73982480005105,9.31540974488665,10.0955981448663,9.71213346972932,9.49734726091938,8.32937434661688,9.29701068876893,14.7075005857603,14.3150645299205,14.0456071893706,11.5204899942183,13.4524013484798,10.9785172322892,7.8137005583514,14.2383329490704,6.75315132038016,11.6126668310376,10.3120004915784,9.39653093274079,8.20157561631323,11.8132861599767,7.02815508993105,4.92769630792852,1.72084775396277,0.679971333707751,0,0.649776417447669,0.896053774194671,1.26399978118577,3.06774580640504,1.55871602761721,2.47337702157238,8.59144860637751,2.56652954828636,12.7402619853323,14.2213340630666,3.68034769719064,3.80039798212648,2.02209778005913,1.82694207550496,0.517875767294343,3.41416919849097,5.20455980298408,2.13125834818499,3.45923245884088,3.46662073271032,4.23319345688537,3.51866455723091,8.15743393523434,1.73519228303894,2.65383165584962,4.04417124868523,2.20841518460394,0.969750506270444,0,7.61230072230023,7.12118803165747,1.78819938646014,4.79260498023681,4.79922184794726,3.55796635804581,10.3355541189328,11.4375150704657,12.6910895633993,23.292458905765,19.6900902144355,11.4283424507758,12.3303359931496,8.96186401882783,3.35898820647251,4.54900965180614,3.36706969418358,4.68433594665733,4.82794419310293,5.76198815377118,3.61691562805716,7.48401490664606,5.38077625196369,6.37171727006156,5.69147415625834,3.88022387279116,4.72765200419548,4.39877810409872,6.79506770525482,4.44875598760957,4.52727816478817,2.26360350048738,5.9710280045548,4.21327912387941,3.86021860672073,3.9782889915383,5.59239585845855,7.97388603935727,4.32148947506436,2.84093682702252,4.72234156193769,4.9365476123961,3.72054311600653,4.82892122519315,6.65562451492866,7.24063339619314,4.26835406605648,5.18840381093477,3.65499968563331,3.95190207523891,3.35516046900929,14.5100064509248,12.4514580978934,0.991256348951394,0.793351699990633,4.47905326123991,2.55460339046482,3.60828891701861,4.84040459096022,5.11469500843202,3.80451252225118,2.37264530772256,4.44687177754829,3.51869292320377,4.97391180102877,3.11942539390592,2.69645822596266,2.16138049874694,2.19055400579804,5.50036912763937,4.22719496655997,5.63538678365402,3.25842124552503,3.29719228184964,5.61086559122549,7.3986748435381,5.01874503130647,2.98297582898612,1.85095745882701,1.48226313543574,3.33690211432188,1.76903095601883,2.47348323623339,2.43432145666204,3.13530307678142,1.2731292589071,1.43848068725405,3.40483976227574,1.09824565275233,7.18841032636773,3.34926852901653,1.87222603868736,2.77836765741823,1.25578189465339,0.482443521363367,3.8798169934987,4.54779388249163,3.58522948172457,5.43184274480602,4.45911471748154,3.85264392116176,7.61739650835244,8.97614780145875,6.30540576424764,8.63712289630222,7.65382889555938,3.60499292374624,3.62638461918381,4.48412081602686,0,2.71952841909355,2.95058563811422,2.48343071674259,11.8807436590966,7.73597131508541,4.91804836130026,3.53459298086122,2.52406575533005,5.0757036758563,4.09304455692318,1.43381278771531,6.68396022247182,7.64306633129848,2.83367491172426,5.26060544240361,3.95287777946523,14.7807805554031,3.97432238583152,7.12262414669021,10.2618784392753,4.45419332025846,2.65490276679926,3.39892890616974,2.72091201268276,3.01768127609437,4.72483028609236,3.3817866273832,1.80899805217755,2.90826983582004,4.63446591900138,2.52829406348653,3.16255825724996,5.15677716240934,5.10659408630682,1.98067203434441,7.89087971074802,6.00143698088458,5.14286677562593,7.13475270408282,4.27827453565514,6.69822888052118,4.4587624532105,10.3797714723272,2.20528398054962,5.11147384118588,5.8127193610526,5.60910201831849,4.17803204010978,6.23735419031233,1.45740418314925,12.9797711407357,1.87957968877638,6.60437977482312,1.48155621895769,2.26042148405629,1.6403307326523,3.43167259809784,7.64902934972349,7.41742697315387,6.63359874261234,1.90934123603023,5.69404788446044,5.28630614529807,3.24016022465404,2.71814784818809,1.9652630737156,4.45052343069908,6.11635572367486,1.30877970992015,2.59229946583586,3.72803587852155,2.81846469342095,5.83114529571517,3.14371131868485,8.16694991045,6.32883135040882,4.05494701177868,5.8678619322877,7.94246747548096,7.96931017635402,6.03960302065015,4.89651010638371,3.47612232690996,1.82452693761148,4.00572732942826,3.37794139742267,3.93858730468459,2.38417625737518,3.60586348559907,3.69223817936443,3.63479219813331,5.18206285253999,4.2346997757473,3.70339946811059,4.42574471545516,3.3894301632655,4.53460767230423,5.99362074109975,3.13998498133165,4.36500002546604,3.86379188064381,3.75364950902364,2.38097111547445,4.28736758158132,2.50786052017682,16.3778034358949,11.5081309126794,12.0308057822273,12.8889886757766,21.9226406326606,21.9064230243013,24.9758325085768,22.9663813644352,21.7508356312418,26.4057758993428,4.56664329370377,8.37952234142165,4.43907374960749,6.80698807791223,5.8691685535835,7.35374033800057,3.55594764482584,3.29656091582231,3.20919209591815,4.04315538822076,2.02783439912192,3.58390048633545,3.55837728385553,4.41773551593598,3.56099907524802,3.33405583898152,3.47652977834566,6.36600427530227,4.53294490883637,2.94397840268795,3.08582327146874,2.66213709239006,3.81497903915713,3.92435324907287,2.1645157495526,3.55381353145041,2.0122077016005,2.63069711437843,4.07412341537585,2.80571135828869,4.62676570684279,3.84167481264697,2.04615521584845,4.49316839439301,4.62975866354739,7.99393849401427,5.38042699424439,5.37177635120746,8.60797494309795,5.51478547798789,2.31867835620421 | ||
|short_description=p2@Git1 | |short_description=p2@Git1 | ||
}} | }} |
Revision as of 09:06, 14 November 2012
Short description: | p2@Git1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Git1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -109bp_to_NM_001004144, uc007kgy.1_5end |
EntrezGene: | Git1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.40e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.40e-12 | 23 |
ectodermal cell | 2.52e-11 | 44 |
neurectodermal cell | 2.52e-11 | 44 |
neural cell | 6.30e-11 | 43 |
neuron | 2.85e-09 | 33 |
neuronal stem cell | 2.85e-09 | 33 |
neuroblast | 2.85e-09 | 33 |
electrically signaling cell | 2.85e-09 | 33 |
electrically responsive cell | 1.68e-07 | 39 |
electrically active cell | 1.68e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.