FFCP PHASE1:Mm9::chr11:68902017..68902055,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:68902017..68902055,+ | |id=chr11:68902017..68902055,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.13e-12!23;CL:0000337!4.13e-12!23;CL:0000540!5.47e-11!33;CL:0000047!5.47e-11!33;CL:0000031!5.47e-11!33;CL:0000404!5.47e-11!33;CL:0000221!1.33e-10!44;CL:0000133!1.33e-10!44;CL:0002319!1.36e-10!43;CL:0000393!3.24e-07!39;CL:0000211!3.24e-07!39;CL:0000055!9.39e-07!50 | |ontology_enrichment_celltype=CL:0000117!4.13e-12!23;CL:0000337!4.13e-12!23;CL:0000540!5.47e-11!33;CL:0000047!5.47e-11!33;CL:0000031!5.47e-11!33;CL:0000404!5.47e-11!33;CL:0000221!1.33e-10!44;CL:0000133!1.33e-10!44;CL:0002319!1.36e-10!43;CL:0000393!3.24e-07!39;CL:0000211!3.24e-07!39;CL:0000055!9.39e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.13e-12,23;CL:0000337,4.13e-12,23;CL:0000540,5.47e-11,33;CL:0000047,5.47e-11,33;CL:0000031,5.47e-11,33;CL:0000404,5.47e-11,33;CL:0000221,1.33e-10,44;CL:0000133,1.33e-10,44;CL:0002319,1.36e-10,43;CL:0000393,3.24e-07,39;CL:0000211,3.24e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.30e-27!73;UBERON:0005743!1.30e-27!73;UBERON:0004121!1.70e-27!102;UBERON:0000924!1.70e-27!102;UBERON:0006601!1.70e-27!102;UBERON:0000073!2.95e-26!75;UBERON:0001016!2.95e-26!75;UBERON:0002346!3.07e-25!71;UBERON:0003075!3.07e-25!71;UBERON:0007284!3.07e-25!71;UBERON:0001049!1.40e-24!52;UBERON:0005068!1.40e-24!52;UBERON:0006241!1.40e-24!52;UBERON:0007135!1.40e-24!52;UBERON:0000033!2.16e-24!63;UBERON:0000955!8.92e-24!50;UBERON:0006238!8.92e-24!50;UBERON:0002616!5.24e-23!49;UBERON:0002020!2.15e-19!34;UBERON:0003056!9.69e-19!49;UBERON:0003080!2.32e-18!40;UBERON:0002780!9.97e-18!39;UBERON:0001890!9.97e-18!39;UBERON:0006240!9.97e-18!39;UBERON:0002791!1.12e-16!29;UBERON:0003528!1.12e-16!29;UBERON:0001893!1.12e-16!29;UBERON:0007811!9.79e-14!86;UBERON:0000153!3.17e-13!94;UBERON:0000956!2.48e-12!21;UBERON:0001869!2.48e-12!21;UBERON:0000203!2.48e-12!21;UBERON:0002619!1.18e-10!17;UBERON:0004111!3.27e-08!122;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000025!2.90e-07!114;UBERON:0003076!8.25e-07!12;UBERON:0003057!8.25e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!1.30e-27!73;UBERON:0005743!1.30e-27!73;UBERON:0004121!1.70e-27!102;UBERON:0000924!1.70e-27!102;UBERON:0006601!1.70e-27!102;UBERON:0000073!2.95e-26!75;UBERON:0001016!2.95e-26!75;UBERON:0002346!3.07e-25!71;UBERON:0003075!3.07e-25!71;UBERON:0007284!3.07e-25!71;UBERON:0001049!1.40e-24!52;UBERON:0005068!1.40e-24!52;UBERON:0006241!1.40e-24!52;UBERON:0007135!1.40e-24!52;UBERON:0000033!2.16e-24!63;UBERON:0000955!8.92e-24!50;UBERON:0006238!8.92e-24!50;UBERON:0002616!5.24e-23!49;UBERON:0002020!2.15e-19!34;UBERON:0003056!9.69e-19!49;UBERON:0003080!2.32e-18!40;UBERON:0002780!9.97e-18!39;UBERON:0001890!9.97e-18!39;UBERON:0006240!9.97e-18!39;UBERON:0002791!1.12e-16!29;UBERON:0003528!1.12e-16!29;UBERON:0001893!1.12e-16!29;UBERON:0007811!9.79e-14!86;UBERON:0000153!3.17e-13!94;UBERON:0000956!2.48e-12!21;UBERON:0001869!2.48e-12!21;UBERON:0000203!2.48e-12!21;UBERON:0002619!1.18e-10!17;UBERON:0004111!3.27e-08!122;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000025!2.90e-07!114;UBERON:0003076!8.25e-07!12;UBERON:0003057!8.25e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-27,73;UBERON:0004121,4.86e-27,95;UBERON:0000924,4.86e-27,95;UBERON:0006601,4.86e-27,95;UBERON:0001016,2.95e-26,75;UBERON:0000073,5.97e-26,54;UBERON:0002346,2.44e-25,64;UBERON:0003075,2.44e-25,64;UBERON:0007284,2.44e-25,64;UBERON:0010314,4.14e-25,92;UBERON:0001049,1.40e-24,52;UBERON:0005068,1.40e-24,52;UBERON:0006241,1.40e-24,52;UBERON:0007135,1.40e-24,52;UBERON:0010371,4.45e-24,73;UBERON:0000955,7.51e-22,47;UBERON:0006238,7.51e-22,47;UBERON:0002616,4.26e-21,46;UBERON:0002020,2.15e-19,34;UBERON:0003056,9.69e-19,49;UBERON:0003080,2.32e-18,40;UBERON:0002780,9.97e-18,39;UBERON:0001890,9.97e-18,39;UBERON:0006240,9.97e-18,39;UBERON:0003528,1.12e-16,29;UBERON:0002791,1.12e-16,29;UBERON:0001893,1.12e-16,29;UBERON:0000956,2.48e-12,21;UBERON:0001869,2.48e-12,21;UBERON:0000203,2.48e-12,21;UBERON:0002619,1.18e-10,17;UBERON:0004111,3.27e-08,122;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10;UBERON:0000025,2.90e-07,114;UBERON:0003076,8.25e-07,12;UBERON:0003057,8.25e-07,12 | |||
|phase1_expression=74.7895115979388,27.5690572035095,34.1249429542152,36.2957053568196,35.0627010962443,28.2037176811975,29.9024179962273,46.8717664092922,64.7628121897667,86.3698102128156,31.8465420899439,34.0627118910086,40.745773723627,55.3371147312254,27.6481102307,30.1688148410841,55.9649502502517,45.2688207289071,42.2312455505675,38.1950686618227,250.707619365354,24.9220287514222,19.8511839745591,39.5181284299714,32.1172993494038,22.3950466004858,26.2764817657036,26.7184328530502,34.9643091799728,23.1867719379136,25.7207392360153,40.0069324279568,36.9038872550742,31.6963362030877,14.4425809875637,11.137721239019,12.4543307320045,56.5017701494825,29.6907430919044,27.2232346866375,64.7054636834116,66.9384575259277,50.0075663622088,32.9849663096012,36.2929413765862,22.3927037637251,111.099570897422,101.817748029669,131.592023457949,143.683695415895,46.4754919796204,61.8136026769378,62.2473468474202,79.0644734792365,66.8826660293503,43.9913635621469,39.2550812716097,58.270946427351,275.555019690772,292.532011537434,273.815166314669,37.2728985276045,30.2360230677787,50.844334026399,58.3431153914515,57.5488893106341,98.2688362500368,133.323751946579,135.729702511797,151.476662808157,128.087901462992,478.465398876371,403.968561400501,146.6214866603,152.202607976959,130.529067698623,516.443481887133,835.969002443724,775.559386410773,266.146528639531,314.808981635892,245.350197532234,605.268741834994,608.909144054278,683.466562305672,402.757276342504,425.26421054692,330.299818002433,38.7718109865902,55.318381998167,44.3492667713567,19.7897491705719,27.19885334831,23.2072372404261,16.8941868536394,26.8816132258401,110.529758643689,49.0839329024806,45.7223368101049,42.4007489412408,81.6891834704747,44.9142670950112,66.2493623237279,63.9960032837998,13.4224445426953,11.1478340809043,17.1878311305026,70.45145378666,148.630345213477,142.356011363167,49.2698328015826,77.3342314912839,66.6478787070009,85.6104598338896,121.351545764047,90.4799457573663,70.4505658042966,176.700414156132,53.0766331169925,72.1480150765445,57.4187947997023,55.2757788574153,80.1484573237925,737.222046875076,542.048077233222,50.3250398760925,16.534487181817,19.7967901227825,16.1379188382792,845.568159440224,1099.83144917598,396.439480916087,1373.73360247956,1241.24282988142,1022.73275532215,867.179551097165,75.972165432336,63.3231480405373,109.176231643347,243.902110972423,42.8096257347295,48.7392461398963,73.6454110903878,92.6834629689648,120.152457501245,140.028296271341,133.243852323934,445.745907783324,30.6106549964636,50.4913234048077,64.5740625681692,67.7314813201206,58.6679695866012,98.207110959251,94.659782747654,31.2483798905034,9.83098462238529,16.7276139624565,12.2190304740105,73.9439007951742,74.1102349540264,67.3432109864196,85.9383390174313,78.1154000037193,77.4420906694639,91.1533063421599,85.3109416450789,84.071046504362,97.4194311487804,94.0679569173216,116.98229217467,114.035990191759,105.603605454995,110.183469802265,1200.96589624973,327.751190428021,53.1974240603915,40.4609366995223,44.3639561113287,42.0348376067394,53.2222615260245,61.7151585347428,52.0364622596997,56.4970109554301,52.6727258314408,56.4917414703357,54.5397403096585,66.6504181337855,67.6525382303347,53.9291645192533,44.524438274187,48.3913294008112,49.1239863468482,41.3579615647218,61.9892546201942,48.8763186828754,49.8457892020798,59.1946319874289,66.9042562774642,77.4953276892911,60.9155064024534,73.1745182056277,32.9062416066735,24.6930756459819,23.9801974038108,25.8591429242582,25.1546550521744,31.1118536080618,26.2264627334862,34.8112326315481,29.5086112730564,28.0052641451843,48.8811902193005,39.0747995051929,32.7639556770289,29.5517287198121,23.8598559984143,35.7008205808892,128.95772673629,32.4030314127529,45.4672284273252,33.4397818977121,46.2339789128349,67.1700092341681,79.0304887741566,77.0777909038305,84.0195318085998,80.1702176528565,93.7594039706024,89.9609597789402,89.278135624668,82.8839105672061,21.1107797514981,17.4049818821987,48.1928987558655,61.5338944259553,498.349031322106,522.060852081673,44.2624352517024,71.1968014716332,73.5134151239878,81.6016975579974,157.689927140409,52.3341667516089,60.6012393504112,65.1076020814315,78.5332761249295,112.518505295855,115.424031160385,1553.26724358302,83.8865903580867,64.6378141312136,71.3444881968663,89.9087170200318,69.0274719367807,40.0588049655719,42.9299450889946,50.1689512150689,73.8254732201932,81.4703142051408,77.0116313641299,55.6206606100583,58.4655700550943,75.53278514666,49.5467460302494,57.7559042189846,253.627506286572,47.5361288242659,68.6894610886426,53.3699217228665,92.9262824285513,125.393278774256,140.524863594211,258.795206747409,45.2916396562961,91.0877904714427,142.461345143505,160.269437859119,105.920663912514,64.5951425980549,67.6841190497784,61.8811192038881,54.2154356131522,434.451482610624,34.3450470403684,47.6753664995044,44.6318810961005,32.2110061478022,37.5909126232819,37.9771767522828,37.2252761686543,37.5069892227403,39.8015924556741,175.659393714781,43.179863123825,62.2157569408157,55.8387612048713,63.771930284413,69.0025701437921,67.5670375387952,87.2820492459547,65.1772295540234,58.5859679278904,86.3661645190827,52.4234432976297,45.6025465434135,36.2354094101044,59.6965148216226,41.0728238659185,62.6827225570787,77.3384202675519,62.2376959554081,56.8337646787353,46.6257353194192,47.2369210262899,58.7780684368412,27.9760797100427,36.7705226650082,36.3778304337826,47.8001277432175,53.4452844361603,42.428993680549,41.205378081707,44.1223386273405,49.0771834858199,52.3287900860202,52.6272555994663,57.823316825838,67.2042187544021,124.701710988366,15.7610026895586,21.1724701598363,26.8615386182526,107.220224687866,65.3135014570113,76.5573789437168,44.8029912275248,129.907174945159,1485.29734608289,1258.52919661062,1276.98409945642,875.076404494057,904.994008617018,968.414976453596,918.705622815488,1196.05311576353,1049.9309616164,1193.9552788997,36.429359002046,90.5786462620341,69.6593111476867,94.5685129395664,98.7277995977797,98.7239640376576,114.901558273435,115.997737225497,136.711583286113,118.009597893693,124.204856946217,127.322780435601,111.80795991904,122.928292617349,126.530338109216,134.314820941827,118.202012463753,115.359713837296,101.785217498417,108.338405218916,113.146853287187,104.888201440168,107.057849286347,100.579720309571,108.508115618876,97.4760282912113,111.037279533773,118.118300435591,99.1370031074791,97.6387552684465,109.500121728613,105.892318553731,91.6677536700104,102.878062547481,104.362476540797,204.34505275324,116.497941005813,125.269824510158,125.867722501299,110.516300978877,98.0800944674383 | |phase1_expression=74.7895115979388,27.5690572035095,34.1249429542152,36.2957053568196,35.0627010962443,28.2037176811975,29.9024179962273,46.8717664092922,64.7628121897667,86.3698102128156,31.8465420899439,34.0627118910086,40.745773723627,55.3371147312254,27.6481102307,30.1688148410841,55.9649502502517,45.2688207289071,42.2312455505675,38.1950686618227,250.707619365354,24.9220287514222,19.8511839745591,39.5181284299714,32.1172993494038,22.3950466004858,26.2764817657036,26.7184328530502,34.9643091799728,23.1867719379136,25.7207392360153,40.0069324279568,36.9038872550742,31.6963362030877,14.4425809875637,11.137721239019,12.4543307320045,56.5017701494825,29.6907430919044,27.2232346866375,64.7054636834116,66.9384575259277,50.0075663622088,32.9849663096012,36.2929413765862,22.3927037637251,111.099570897422,101.817748029669,131.592023457949,143.683695415895,46.4754919796204,61.8136026769378,62.2473468474202,79.0644734792365,66.8826660293503,43.9913635621469,39.2550812716097,58.270946427351,275.555019690772,292.532011537434,273.815166314669,37.2728985276045,30.2360230677787,50.844334026399,58.3431153914515,57.5488893106341,98.2688362500368,133.323751946579,135.729702511797,151.476662808157,128.087901462992,478.465398876371,403.968561400501,146.6214866603,152.202607976959,130.529067698623,516.443481887133,835.969002443724,775.559386410773,266.146528639531,314.808981635892,245.350197532234,605.268741834994,608.909144054278,683.466562305672,402.757276342504,425.26421054692,330.299818002433,38.7718109865902,55.318381998167,44.3492667713567,19.7897491705719,27.19885334831,23.2072372404261,16.8941868536394,26.8816132258401,110.529758643689,49.0839329024806,45.7223368101049,42.4007489412408,81.6891834704747,44.9142670950112,66.2493623237279,63.9960032837998,13.4224445426953,11.1478340809043,17.1878311305026,70.45145378666,148.630345213477,142.356011363167,49.2698328015826,77.3342314912839,66.6478787070009,85.6104598338896,121.351545764047,90.4799457573663,70.4505658042966,176.700414156132,53.0766331169925,72.1480150765445,57.4187947997023,55.2757788574153,80.1484573237925,737.222046875076,542.048077233222,50.3250398760925,16.534487181817,19.7967901227825,16.1379188382792,845.568159440224,1099.83144917598,396.439480916087,1373.73360247956,1241.24282988142,1022.73275532215,867.179551097165,75.972165432336,63.3231480405373,109.176231643347,243.902110972423,42.8096257347295,48.7392461398963,73.6454110903878,92.6834629689648,120.152457501245,140.028296271341,133.243852323934,445.745907783324,30.6106549964636,50.4913234048077,64.5740625681692,67.7314813201206,58.6679695866012,98.207110959251,94.659782747654,31.2483798905034,9.83098462238529,16.7276139624565,12.2190304740105,73.9439007951742,74.1102349540264,67.3432109864196,85.9383390174313,78.1154000037193,77.4420906694639,91.1533063421599,85.3109416450789,84.071046504362,97.4194311487804,94.0679569173216,116.98229217467,114.035990191759,105.603605454995,110.183469802265,1200.96589624973,327.751190428021,53.1974240603915,40.4609366995223,44.3639561113287,42.0348376067394,53.2222615260245,61.7151585347428,52.0364622596997,56.4970109554301,52.6727258314408,56.4917414703357,54.5397403096585,66.6504181337855,67.6525382303347,53.9291645192533,44.524438274187,48.3913294008112,49.1239863468482,41.3579615647218,61.9892546201942,48.8763186828754,49.8457892020798,59.1946319874289,66.9042562774642,77.4953276892911,60.9155064024534,73.1745182056277,32.9062416066735,24.6930756459819,23.9801974038108,25.8591429242582,25.1546550521744,31.1118536080618,26.2264627334862,34.8112326315481,29.5086112730564,28.0052641451843,48.8811902193005,39.0747995051929,32.7639556770289,29.5517287198121,23.8598559984143,35.7008205808892,128.95772673629,32.4030314127529,45.4672284273252,33.4397818977121,46.2339789128349,67.1700092341681,79.0304887741566,77.0777909038305,84.0195318085998,80.1702176528565,93.7594039706024,89.9609597789402,89.278135624668,82.8839105672061,21.1107797514981,17.4049818821987,48.1928987558655,61.5338944259553,498.349031322106,522.060852081673,44.2624352517024,71.1968014716332,73.5134151239878,81.6016975579974,157.689927140409,52.3341667516089,60.6012393504112,65.1076020814315,78.5332761249295,112.518505295855,115.424031160385,1553.26724358302,83.8865903580867,64.6378141312136,71.3444881968663,89.9087170200318,69.0274719367807,40.0588049655719,42.9299450889946,50.1689512150689,73.8254732201932,81.4703142051408,77.0116313641299,55.6206606100583,58.4655700550943,75.53278514666,49.5467460302494,57.7559042189846,253.627506286572,47.5361288242659,68.6894610886426,53.3699217228665,92.9262824285513,125.393278774256,140.524863594211,258.795206747409,45.2916396562961,91.0877904714427,142.461345143505,160.269437859119,105.920663912514,64.5951425980549,67.6841190497784,61.8811192038881,54.2154356131522,434.451482610624,34.3450470403684,47.6753664995044,44.6318810961005,32.2110061478022,37.5909126232819,37.9771767522828,37.2252761686543,37.5069892227403,39.8015924556741,175.659393714781,43.179863123825,62.2157569408157,55.8387612048713,63.771930284413,69.0025701437921,67.5670375387952,87.2820492459547,65.1772295540234,58.5859679278904,86.3661645190827,52.4234432976297,45.6025465434135,36.2354094101044,59.6965148216226,41.0728238659185,62.6827225570787,77.3384202675519,62.2376959554081,56.8337646787353,46.6257353194192,47.2369210262899,58.7780684368412,27.9760797100427,36.7705226650082,36.3778304337826,47.8001277432175,53.4452844361603,42.428993680549,41.205378081707,44.1223386273405,49.0771834858199,52.3287900860202,52.6272555994663,57.823316825838,67.2042187544021,124.701710988366,15.7610026895586,21.1724701598363,26.8615386182526,107.220224687866,65.3135014570113,76.5573789437168,44.8029912275248,129.907174945159,1485.29734608289,1258.52919661062,1276.98409945642,875.076404494057,904.994008617018,968.414976453596,918.705622815488,1196.05311576353,1049.9309616164,1193.9552788997,36.429359002046,90.5786462620341,69.6593111476867,94.5685129395664,98.7277995977797,98.7239640376576,114.901558273435,115.997737225497,136.711583286113,118.009597893693,124.204856946217,127.322780435601,111.80795991904,122.928292617349,126.530338109216,134.314820941827,118.202012463753,115.359713837296,101.785217498417,108.338405218916,113.146853287187,104.888201440168,107.057849286347,100.579720309571,108.508115618876,97.4760282912113,111.037279533773,118.118300435591,99.1370031074791,97.6387552684465,109.500121728613,105.892318553731,91.6677536700104,102.878062547481,104.362476540797,204.34505275324,116.497941005813,125.269824510158,125.867722501299,110.516300978877,98.0800944674383 | ||
|short_description=p1@Vamp2 | |short_description=p1@Vamp2 | ||
}} | }} |
Revision as of 14:52, 14 November 2012
Short description: | p1@Vamp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vamp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000149559, ENSMUST00000149780, NM_009497, uc007jpe.1_5end |
EntrezGene: | Vamp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.13e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.13e-12 | 23 |
neuron | 5.47e-11 | 33 |
neuronal stem cell | 5.47e-11 | 33 |
neuroblast | 5.47e-11 | 33 |
electrically signaling cell | 5.47e-11 | 33 |
ectodermal cell | 1.33e-10 | 44 |
neurectodermal cell | 1.33e-10 | 44 |
neural cell | 1.36e-10 | 43 |
electrically responsive cell | 3.24e-07 | 39 |
electrically active cell | 3.24e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.