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FFCP PHASE1:Mm9::chr11:41995891..41995939,-: Difference between revisions

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|id=chr11:41995891..41995939,-
|id=chr11:41995891..41995939,-
|ontology_enrichment_celltype=CL:0000117!2.57e-09!23;CL:0000337!2.57e-09!23;CL:0000540!2.79e-07!33;CL:0000047!2.79e-07!33;CL:0000031!2.79e-07!33;CL:0000404!2.79e-07!33
|ontology_enrichment_celltype=CL:0000117!2.57e-09!23;CL:0000337!2.57e-09!23;CL:0000540!2.79e-07!33;CL:0000047!2.79e-07!33;CL:0000031!2.79e-07!33;CL:0000404!2.79e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.62e-10,23;CL:0000337,2.62e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.74e-18!71;UBERON:0003075!5.74e-18!71;UBERON:0007284!5.74e-18!71;UBERON:0000033!7.57e-18!63;UBERON:0001049!6.41e-16!52;UBERON:0005068!6.41e-16!52;UBERON:0006241!6.41e-16!52;UBERON:0007135!6.41e-16!52;UBERON:0004121!6.90e-16!102;UBERON:0000924!6.90e-16!102;UBERON:0006601!6.90e-16!102;UBERON:0001017!1.05e-15!73;UBERON:0005743!1.05e-15!73;UBERON:0000073!1.61e-15!75;UBERON:0001016!1.61e-15!75;UBERON:0000955!1.95e-15!50;UBERON:0006238!1.95e-15!50;UBERON:0002020!2.41e-15!34;UBERON:0002616!8.51e-15!49;UBERON:0003056!6.41e-14!49;UBERON:0002791!8.65e-13!29;UBERON:0003528!8.65e-13!29;UBERON:0001893!8.65e-13!29;UBERON:0003080!9.86e-12!40;UBERON:0002780!4.40e-11!39;UBERON:0001890!4.40e-11!39;UBERON:0006240!4.40e-11!39;UBERON:0000956!9.74e-10!21;UBERON:0001869!9.74e-10!21;UBERON:0000203!9.74e-10!21;UBERON:0002619!4.12e-09!17;UBERON:0002021!6.75e-09!10;UBERON:0000411!6.75e-09!10;UBERON:0001950!6.75e-09!10;UBERON:0007811!1.55e-08!86;UBERON:0000153!7.86e-07!94
|ontology_enrichment_uberon=UBERON:0002346!5.74e-18!71;UBERON:0003075!5.74e-18!71;UBERON:0007284!5.74e-18!71;UBERON:0000033!7.57e-18!63;UBERON:0001049!6.41e-16!52;UBERON:0005068!6.41e-16!52;UBERON:0006241!6.41e-16!52;UBERON:0007135!6.41e-16!52;UBERON:0004121!6.90e-16!102;UBERON:0000924!6.90e-16!102;UBERON:0006601!6.90e-16!102;UBERON:0001017!1.05e-15!73;UBERON:0005743!1.05e-15!73;UBERON:0000073!1.61e-15!75;UBERON:0001016!1.61e-15!75;UBERON:0000955!1.95e-15!50;UBERON:0006238!1.95e-15!50;UBERON:0002020!2.41e-15!34;UBERON:0002616!8.51e-15!49;UBERON:0003056!6.41e-14!49;UBERON:0002791!8.65e-13!29;UBERON:0003528!8.65e-13!29;UBERON:0001893!8.65e-13!29;UBERON:0003080!9.86e-12!40;UBERON:0002780!4.40e-11!39;UBERON:0001890!4.40e-11!39;UBERON:0006240!4.40e-11!39;UBERON:0000956!9.74e-10!21;UBERON:0001869!9.74e-10!21;UBERON:0000203!9.74e-10!21;UBERON:0002619!4.12e-09!17;UBERON:0002021!6.75e-09!10;UBERON:0000411!6.75e-09!10;UBERON:0001950!6.75e-09!10;UBERON:0007811!1.55e-08!86;UBERON:0000153!7.86e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.83e-27,54;UBERON:0001049,2.42e-24,52;UBERON:0005068,2.42e-24,52;UBERON:0006241,2.42e-24,52;UBERON:0007135,2.42e-24,52;UBERON:0001017,8.84e-23,73;UBERON:0002020,3.97e-22,34;UBERON:0001016,7.31e-22,75;UBERON:0002346,1.00e-20,64;UBERON:0003075,1.00e-20,64;UBERON:0007284,1.00e-20,64;UBERON:0000955,9.61e-20,47;UBERON:0006238,9.61e-20,47;UBERON:0002616,1.27e-18,46;UBERON:0004121,3.91e-18,95;UBERON:0000924,3.91e-18,95;UBERON:0006601,3.91e-18,95;UBERON:0010371,4.57e-18,73;UBERON:0003528,2.55e-17,29;UBERON:0002791,2.55e-17,29;UBERON:0001893,2.55e-17,29;UBERON:0002021,3.75e-16,10;UBERON:0000411,3.75e-16,10;UBERON:0001950,3.75e-16,10;UBERON:0003080,2.07e-15,40;UBERON:0002780,2.80e-14,39;UBERON:0001890,2.80e-14,39;UBERON:0006240,2.80e-14,39;UBERON:0003056,8.44e-14,49;UBERON:0010314,4.38e-13,92;UBERON:0002619,4.90e-12,17;UBERON:0000956,6.20e-11,21;UBERON:0001869,6.20e-11,21;UBERON:0000203,6.20e-11,21;UBERON:0003076,4.96e-10,12;UBERON:0003057,4.96e-10,12;UBERON:0002420,6.86e-08,8;UBERON:0007245,6.86e-08,8;UBERON:0010009,6.86e-08,8;UBERON:0010011,6.86e-08,8;UBERON:0000454,6.86e-08,8;UBERON:0002240,2.24e-07,6;UBERON:0005174,2.24e-07,6;UBERON:0001137,2.24e-07,6
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3958008802433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0.515672092277442,2.83243045203437,3.1739458756322,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.311068836925433,0.270011876663381,0.420649922702764,2.28520787523043,1.54607978666129,0.979926393719632,0.191690942036473,0.919218786610021,85.8903871795232,57.9700514906752,62.3642525020349,1.84640802822271,1.46380229763855,0,28.7558488971422,45.0210088025344,31.6292372897997,3.83017161115768,2.56269025438385,1.1183966749518,0.151452386666368,0.151143120213571,0,0,0,0,0,0,1.96622188184453,0,0,0,1.97180787687353,0,0,0,0,0,0,1.7127581957859,0,0,1.73485326766136,0.608930956624282,0.691846491768175,0.753613202763113,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,78.7580343961062,63.4623521644769,0,0,0,0,74.8953197024114,23.7900313465686,2.63874139437015,90.2148221797915,88.4775482362944,58.3884405212364,42.0204871345492,1.73126918545538,0.124406970610093,0,2.94618598241064,0.910843100738926,0.229902104433473,0.720248519221397,0.60281927134286,0.204109497453984,0.768682321709099,0.281105173679186,6.46758426847539,0,0,0.175951124163949,0,0,0.348252166522167,0,0.995171334092466,0,0,0,0,0.469052119962192,0.540186184383045,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0,0,0.162137619091711,0,0,0.134206418760372,47.946108272621,4.52780294468852,0,0,0.426576501070468,0.928946687441754,0.38660238396628,0.403367049246685,0.22237804384487,0.570676878337677,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,14.4495530989013,16.5268478095006,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0,0.584511715822624,0,48.5195187796929,0,0.35613120733451,1.30309567482861,0.164970122972535,0,0.728341908464944,0,1.13163047853539,0,0.614870295887855,0.258428293168221,0,0.712994756769443,0,0,0,0,0.36012218806262,0,0,0.354680467284547,0.356737635204141,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,7.6024373824309,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,2.86401185404534,0.949007980743406,1.21991680276109,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.661227645802687,0.523511883968059,0,0,0,0.598066184175915,0.165458490457098,2.13896307178452,2.71235629303235,2.36538575687089,2.11243029562357,0.39061315453185,0.104859344425711,0,0,0,0.810900861160657,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,74.5472432254528,68.5884602395694,71.0390436664852,61.8671456437275,81.5248198527064,91.4026615841538,85.0528350292075,72.9520349223237,91.9879090237935,107.176384532627,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.735374033800057,1.11123363900808,0.412070114477788,1.28367683836726,1.01078884705519,1.2673964994512,0.377252682772152,1.03005658216871,0.768301828858431,0.804096565378586,1.42888107384922,0.811190281613988,0.77163688185482,2.06042950401653,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.726732083161643,0.752875043322645,1.01537529470012,0.73171189149109,0.263069711437843,0.950628796921032,0.561142271657738,0.237270036248348,0.788035859004508,2.04615521584845,0.77468420592983,0.964533054905707,0.999242311751784,1.40358965067245,1.71896843238639,0.382576664137687,0.220591419119515,0.927471342481686
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3958008802433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0.515672092277442,2.83243045203437,3.1739458756322,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.311068836925433,0.270011876663381,0.420649922702764,2.28520787523043,1.54607978666129,0.979926393719632,0.191690942036473,0.919218786610021,85.8903871795232,57.9700514906752,62.3642525020349,1.84640802822271,1.46380229763855,0,28.7558488971422,45.0210088025344,31.6292372897997,3.83017161115768,2.56269025438385,1.1183966749518,0.151452386666368,0.151143120213571,0,0,0,0,0,0,1.96622188184453,0,0,0,1.97180787687353,0,0,0,0,0,0,1.7127581957859,0,0,1.73485326766136,0.608930956624282,0.691846491768175,0.753613202763113,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,78.7580343961062,63.4623521644769,0,0,0,0,74.8953197024114,23.7900313465686,2.63874139437015,90.2148221797915,88.4775482362944,58.3884405212364,42.0204871345492,1.73126918545538,0.124406970610093,0,2.94618598241064,0.910843100738926,0.229902104433473,0.720248519221397,0.60281927134286,0.204109497453984,0.768682321709099,0.281105173679186,6.46758426847539,0,0,0.175951124163949,0,0,0.348252166522167,0,0.995171334092466,0,0,0,0,0.469052119962192,0.540186184383045,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0,0,0.162137619091711,0,0,0.134206418760372,47.946108272621,4.52780294468852,0,0,0.426576501070468,0.928946687441754,0.38660238396628,0.403367049246685,0.22237804384487,0.570676878337677,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,14.4495530989013,16.5268478095006,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0,0.584511715822624,0,48.5195187796929,0,0.35613120733451,1.30309567482861,0.164970122972535,0,0.728341908464944,0,1.13163047853539,0,0.614870295887855,0.258428293168221,0,0.712994756769443,0,0,0,0,0.36012218806262,0,0,0.354680467284547,0.356737635204141,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,7.6024373824309,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,2.86401185404534,0.949007980743406,1.21991680276109,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.661227645802687,0.523511883968059,0,0,0,0.598066184175915,0.165458490457098,2.13896307178452,2.71235629303235,2.36538575687089,2.11243029562357,0.39061315453185,0.104859344425711,0,0,0,0.810900861160657,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,74.5472432254528,68.5884602395694,71.0390436664852,61.8671456437275,81.5248198527064,91.4026615841538,85.0528350292075,72.9520349223237,91.9879090237935,107.176384532627,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.735374033800057,1.11123363900808,0.412070114477788,1.28367683836726,1.01078884705519,1.2673964994512,0.377252682772152,1.03005658216871,0.768301828858431,0.804096565378586,1.42888107384922,0.811190281613988,0.77163688185482,2.06042950401653,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.726732083161643,0.752875043322645,1.01537529470012,0.73171189149109,0.263069711437843,0.950628796921032,0.561142271657738,0.237270036248348,0.788035859004508,2.04615521584845,0.77468420592983,0.964533054905707,0.999242311751784,1.40358965067245,1.71896843238639,0.382576664137687,0.220591419119515,0.927471342481686
|short_description=p2@Gabra1
|short_description=p2@Gabra1
}}
}}

Revision as of 16:40, 14 November 2012

Short description:p2@Gabra1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gabra1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 21bp_to_ENSMUST00000169305_5end
EntrezGene:Gabra1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Gabra1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D385.89
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F357.97
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D762.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.76
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E545.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B278.76
cerebellum, neonate N30.CNhs11135.1395-42I263.46
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A474.90
corpus striatum, adult.CNhs10487.19-21D823.79
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D590.21
cortex, neonate N30.CNhs11107.1392-42F288.48
diencephalon, adult.CNhs10482.20-12F258.39
diencephalon, neonate N30.CNhs11201.1388-42B242.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E847.95
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.45
medulla oblongata, neonate N30.CNhs11200.1396-42A316.53
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I948.52
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A174.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A268.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A371.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D761.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A481.52
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A591.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A685.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A772.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A891.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9107.18
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.62e-1023
neuroblast (sensu Vertebrata)2.62e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.83e-2754
neural tube2.42e-2452
neural rod2.42e-2452
future spinal cord2.42e-2452
neural keel2.42e-2452
central nervous system8.84e-2373
gray matter3.97e-2234
nervous system7.31e-2275
neurectoderm1.00e-2064
neural plate1.00e-2064
presumptive neural plate1.00e-2064
brain9.61e-2047
future brain9.61e-2047
regional part of brain1.27e-1846
ectoderm-derived structure3.91e-1895
ectoderm3.91e-1895
presumptive ectoderm3.91e-1895
ecto-epithelium4.57e-1873
brain grey matter2.55e-1729
regional part of telencephalon2.55e-1729
telencephalon2.55e-1729
occipital lobe3.75e-1610
visual cortex3.75e-1610
neocortex3.75e-1610
anterior neural tube2.07e-1540
regional part of forebrain2.80e-1439
forebrain2.80e-1439
future forebrain2.80e-1439
pre-chordal neural plate8.44e-1449
structure with developmental contribution from neural crest4.38e-1392
regional part of cerebral cortex4.90e-1217
cerebral cortex6.20e-1121
cerebral hemisphere6.20e-1121
pallium6.20e-1121
posterior neural tube4.96e-1012
chordal neural plate4.96e-1012
basal ganglion6.86e-088
nuclear complex of neuraxis6.86e-088
aggregate regional part of brain6.86e-088
collection of basal ganglia6.86e-088
cerebral subcortex6.86e-088
spinal cord2.24e-076
dorsal region element2.24e-076
dorsum2.24e-076







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