FFCP PHASE1:Mm9::chr7:25858091..25858144,-: Difference between revisions
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|id=chr7:25858091..25858144,- | |id=chr7:25858091..25858144,- | ||
|ontology_enrichment_celltype=CL:0000221!1.10e-13!44;CL:0000133!1.10e-13!44;CL:0002319!1.88e-13!43;CL:0000540!4.59e-12!33;CL:0000047!4.59e-12!33;CL:0000031!4.59e-12!33;CL:0000404!4.59e-12!33;CL:0000117!3.33e-11!23;CL:0000337!3.33e-11!23;CL:0000055!2.31e-10!50;CL:0000393!1.51e-09!39;CL:0000211!1.51e-09!39 | |ontology_enrichment_celltype=CL:0000221!1.10e-13!44;CL:0000133!1.10e-13!44;CL:0002319!1.88e-13!43;CL:0000540!4.59e-12!33;CL:0000047!4.59e-12!33;CL:0000031!4.59e-12!33;CL:0000404!4.59e-12!33;CL:0000117!3.33e-11!23;CL:0000337!3.33e-11!23;CL:0000055!2.31e-10!50;CL:0000393!1.51e-09!39;CL:0000211!1.51e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.73e-14,44;CL:0000133,5.73e-14,44;CL:0002319,9.92e-14,43;CL:0000540,2.14e-12,33;CL:0000047,2.14e-12,33;CL:0000031,2.14e-12,33;CL:0000404,2.14e-12,33;CL:0000117,1.66e-11,23;CL:0000337,1.66e-11,23;CL:0000393,1.65e-09,39;CL:0000211,1.65e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.49e-31!73;UBERON:0005743!3.49e-31!73;UBERON:0000073!1.18e-29!75;UBERON:0001016!1.18e-29!75;UBERON:0004121!1.09e-27!102;UBERON:0000924!1.09e-27!102;UBERON:0006601!1.09e-27!102;UBERON:0002346!1.04e-25!71;UBERON:0003075!1.04e-25!71;UBERON:0007284!1.04e-25!71;UBERON:0001049!2.76e-24!52;UBERON:0005068!2.76e-24!52;UBERON:0006241!2.76e-24!52;UBERON:0007135!2.76e-24!52;UBERON:0000033!2.50e-23!63;UBERON:0000955!5.20e-22!50;UBERON:0006238!5.20e-22!50;UBERON:0002616!2.70e-21!49;UBERON:0003056!7.56e-21!49;UBERON:0003080!7.32e-19!40;UBERON:0002780!2.04e-18!39;UBERON:0001890!2.04e-18!39;UBERON:0006240!2.04e-18!39;UBERON:0002020!1.42e-16!34;UBERON:0002791!1.65e-13!29;UBERON:0003528!1.65e-13!29;UBERON:0001893!1.65e-13!29;UBERON:0000153!7.88e-11!94;UBERON:0000956!1.99e-10!21;UBERON:0001869!1.99e-10!21;UBERON:0000203!1.99e-10!21;UBERON:0000468!2.41e-10!333;UBERON:0007811!3.20e-09!86;UBERON:0000025!3.34e-09!114;UBERON:0004111!1.39e-08!122;UBERON:0002619!3.05e-08!17;UBERON:0000922!4.08e-08!328 | |ontology_enrichment_uberon=UBERON:0001017!3.49e-31!73;UBERON:0005743!3.49e-31!73;UBERON:0000073!1.18e-29!75;UBERON:0001016!1.18e-29!75;UBERON:0004121!1.09e-27!102;UBERON:0000924!1.09e-27!102;UBERON:0006601!1.09e-27!102;UBERON:0002346!1.04e-25!71;UBERON:0003075!1.04e-25!71;UBERON:0007284!1.04e-25!71;UBERON:0001049!2.76e-24!52;UBERON:0005068!2.76e-24!52;UBERON:0006241!2.76e-24!52;UBERON:0007135!2.76e-24!52;UBERON:0000033!2.50e-23!63;UBERON:0000955!5.20e-22!50;UBERON:0006238!5.20e-22!50;UBERON:0002616!2.70e-21!49;UBERON:0003056!7.56e-21!49;UBERON:0003080!7.32e-19!40;UBERON:0002780!2.04e-18!39;UBERON:0001890!2.04e-18!39;UBERON:0006240!2.04e-18!39;UBERON:0002020!1.42e-16!34;UBERON:0002791!1.65e-13!29;UBERON:0003528!1.65e-13!29;UBERON:0001893!1.65e-13!29;UBERON:0000153!7.88e-11!94;UBERON:0000956!1.99e-10!21;UBERON:0001869!1.99e-10!21;UBERON:0000203!1.99e-10!21;UBERON:0000468!2.41e-10!333;UBERON:0007811!3.20e-09!86;UBERON:0000025!3.34e-09!114;UBERON:0004111!1.39e-08!122;UBERON:0002619!3.05e-08!17;UBERON:0000922!4.08e-08!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.03e-32,73;UBERON:0001016,2.01e-30,75;UBERON:0004121,2.47e-27,95;UBERON:0000924,2.47e-27,95;UBERON:0006601,2.47e-27,95;UBERON:0002346,3.01e-27,64;UBERON:0003075,3.01e-27,64;UBERON:0007284,3.01e-27,64;UBERON:0000073,2.47e-25,54;UBERON:0001049,5.28e-25,52;UBERON:0005068,5.28e-25,52;UBERON:0006241,5.28e-25,52;UBERON:0007135,5.28e-25,52;UBERON:0010371,3.84e-24,73;UBERON:0010314,2.22e-22,92;UBERON:0000955,6.66e-22,47;UBERON:0006238,6.66e-22,47;UBERON:0003056,1.86e-21,49;UBERON:0002616,3.61e-21,46;UBERON:0003080,2.08e-19,40;UBERON:0002780,6.00e-19,39;UBERON:0001890,6.00e-19,39;UBERON:0006240,6.00e-19,39;UBERON:0002020,4.76e-17,34;UBERON:0003528,6.94e-14,29;UBERON:0002791,6.94e-14,29;UBERON:0001893,6.94e-14,29;UBERON:0000956,1.04e-10,21;UBERON:0001869,1.04e-10,21;UBERON:0000203,1.04e-10,21;UBERON:0000025,1.13e-08,114;UBERON:0002619,1.88e-08,17;UBERON:0004111,8.32e-08,122 | |||
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|short_description=p@chr7:25858091..25858144,- | |short_description=p@chr7:25858091..25858144,- | ||
}} | }} |
Revision as of 04:39, 14 November 2012
Short description: | p@chr7:25858091..25858144, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25858091..25858144, - |
Coexpression cluster: | MCL_coexpression_mm9:1392 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.73e-14 | 44 |
neurectodermal cell | 5.73e-14 | 44 |
neural cell | 9.92e-14 | 43 |
neuron | 2.14e-12 | 33 |
neuronal stem cell | 2.14e-12 | 33 |
neuroblast | 2.14e-12 | 33 |
electrically signaling cell | 2.14e-12 | 33 |
CNS neuron (sensu Vertebrata) | 1.66e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.66e-11 | 23 |
electrically responsive cell | 1.65e-09 | 39 |
electrically active cell | 1.65e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.03e-32 | 73 |
nervous system | 2.01e-30 | 75 |
ectoderm-derived structure | 2.47e-27 | 95 |
ectoderm | 2.47e-27 | 95 |
presumptive ectoderm | 2.47e-27 | 95 |
neurectoderm | 3.01e-27 | 64 |
neural plate | 3.01e-27 | 64 |
presumptive neural plate | 3.01e-27 | 64 |
regional part of nervous system | 2.47e-25 | 54 |
neural tube | 5.28e-25 | 52 |
neural rod | 5.28e-25 | 52 |
future spinal cord | 5.28e-25 | 52 |
neural keel | 5.28e-25 | 52 |
ecto-epithelium | 3.84e-24 | 73 |
structure with developmental contribution from neural crest | 2.22e-22 | 92 |
brain | 6.66e-22 | 47 |
future brain | 6.66e-22 | 47 |
pre-chordal neural plate | 1.86e-21 | 49 |
regional part of brain | 3.61e-21 | 46 |
anterior neural tube | 2.08e-19 | 40 |
regional part of forebrain | 6.00e-19 | 39 |
forebrain | 6.00e-19 | 39 |
future forebrain | 6.00e-19 | 39 |
gray matter | 4.76e-17 | 34 |
brain grey matter | 6.94e-14 | 29 |
regional part of telencephalon | 6.94e-14 | 29 |
telencephalon | 6.94e-14 | 29 |
cerebral cortex | 1.04e-10 | 21 |
cerebral hemisphere | 1.04e-10 | 21 |
pallium | 1.04e-10 | 21 |
tube | 1.13e-08 | 114 |
regional part of cerebral cortex | 1.88e-08 | 17 |
anatomical conduit | 8.32e-08 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.