FFCP PHASE1:Mm9::chr1:158869759..158869788,-: Difference between revisions
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|id=chr1:158869759..158869788,- | |id=chr1:158869759..158869788,- | ||
|ontology_enrichment_celltype=CL:0000117!1.13e-13!23;CL:0000337!1.13e-13!23;CL:0000540!6.50e-10!33;CL:0000047!6.50e-10!33;CL:0000031!6.50e-10!33;CL:0000404!6.50e-10!33 | |ontology_enrichment_celltype=CL:0000117!1.13e-13!23;CL:0000337!1.13e-13!23;CL:0000540!6.50e-10!33;CL:0000047!6.50e-10!33;CL:0000031!6.50e-10!33;CL:0000404!6.50e-10!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-20,23;CL:0000337,1.43e-20,23;CL:0000540,9.60e-14,33;CL:0000047,9.60e-14,33;CL:0000031,9.60e-14,33;CL:0000404,9.60e-14,33;CL:0000393,2.78e-10,39;CL:0000211,2.78e-10,39;CL:0002319,1.47e-08,43;CL:0000221,3.49e-08,44;CL:0000133,3.49e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.50e-10!71;UBERON:0003075!1.50e-10!71;UBERON:0007284!1.50e-10!71;UBERON:0000033!4.83e-09!63;UBERON:0004121!1.30e-08!102;UBERON:0000924!1.30e-08!102;UBERON:0006601!1.30e-08!102;UBERON:0001049!3.21e-08!52;UBERON:0005068!3.21e-08!52;UBERON:0006241!3.21e-08!52;UBERON:0007135!3.21e-08!52;UBERON:0001017!3.27e-08!73;UBERON:0005743!3.27e-08!73;UBERON:0003056!5.03e-08!49;UBERON:0002020!8.22e-08!34;UBERON:0000073!1.59e-07!75;UBERON:0001016!1.59e-07!75;UBERON:0000955!1.76e-07!50;UBERON:0006238!1.76e-07!50;UBERON:0002616!4.44e-07!49 | |ontology_enrichment_uberon=UBERON:0002346!1.50e-10!71;UBERON:0003075!1.50e-10!71;UBERON:0007284!1.50e-10!71;UBERON:0000033!4.83e-09!63;UBERON:0004121!1.30e-08!102;UBERON:0000924!1.30e-08!102;UBERON:0006601!1.30e-08!102;UBERON:0001049!3.21e-08!52;UBERON:0005068!3.21e-08!52;UBERON:0006241!3.21e-08!52;UBERON:0007135!3.21e-08!52;UBERON:0001017!3.27e-08!73;UBERON:0005743!3.27e-08!73;UBERON:0003056!5.03e-08!49;UBERON:0002020!8.22e-08!34;UBERON:0000073!1.59e-07!75;UBERON:0001016!1.59e-07!75;UBERON:0000955!1.76e-07!50;UBERON:0006238!1.76e-07!50;UBERON:0002616!4.44e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.74e-10,54;UBERON:0002346,1.56e-09,64;UBERON:0003075,1.56e-09,64;UBERON:0007284,1.56e-09,64;UBERON:0002020,2.23e-09,34;UBERON:0010314,4.07e-09,92;UBERON:0001017,4.60e-09,73;UBERON:0001016,1.62e-08,75;UBERON:0001049,3.83e-08,52;UBERON:0005068,3.83e-08,52;UBERON:0006241,3.83e-08,52;UBERON:0007135,3.83e-08,52;UBERON:0004121,4.28e-08,95;UBERON:0000924,4.28e-08,95;UBERON:0006601,4.28e-08,95;UBERON:0003056,1.16e-07,49;UBERON:0010371,4.52e-07,73 | |||
|phase1_expression=0.480446541314382,0.348975407639361,1.36499771816861,0.30246421130683,0,1.17515490338323,0,0,0.422366166455,0.234064526321993,0,0,0.171200729931206,0.174840804837995,0,0,0,0.473193248037357,0.548457734422955,0.42438965179803,19.9001298953503,0,0,0.159992422793407,0.45881856213434,1.14846392823004,1.29228598847722,0.215471232685889,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0,0.997407872150954,0.816677425049476,0.418531630736908,0,0,0.588231488031014,0,0,0.251793635951155,0.101376931219515,0,0,0.872100625521786,0.219686182734472,0.58328969722285,0.139986421625363,0,0.671130424230945,0,0.336093799142464,0.257259436035947,0,0.515672092277442,4.04632921719196,5.81890077199236,1.90149421051854,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,0.384218305321555,2.7996195323289,2.02508907497536,2.3135745748652,1.71390590642282,2.20868540951614,3.06226998037385,1.91690942036473,1.83843757322004,2.20231761998777,1.78762273319263,1.68967186581868,3.56092976871523,4.20843160571084,5.73004707612436,1.11673199600552,1.68828783009504,1.68078072554491,2.06240009831567,3.84403538157578,4.84638559145781,0.075726193333184,0.226714680320357,0.869593466105033,0,0,0,1.29955283489534,0,1.68533304158102,0,0,0,0.704217098883403,0,0,0,0.649473123033642,0,0,2.51204535381932,0.776813650941515,0.148442139064825,1.04091196059682,0.913396434936424,1.15307748628029,0.904335843315735,1.17588707135705,0.628332956648377,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,1.75668478206928,0.83778682725382,1.02182822083437,0.11981512450592,0,0.254140454146129,0.599162557619291,0.915001205637253,3.39266750704734,0.869121600961382,0.767146371990992,0.41557608911912,1.62241263067758,1.12023300235348,0.870848794270651,0.758168275301024,0.841767423545896,1.82168620147785,1.14951052216736,2.34080768746954,0.753524089178575,4.01415344992834,2.43416068541215,2.62364828767241,0.776110112217047,1.72454394346274,1.32374256117473,0.703804496655795,0.876782929710299,0.834141747676794,0,0.205782136407943,1.39323986772945,0,0.51469581422943,0.284163499395593,2.07125772535502,0.469052119962192,1.2604344302271,0.946978942340841,1.37734962223183,1.54267112887378,0.697601834251224,1.3413670069981,1.40118410840603,2.13927804887525,0.820837320395476,0.891756905004413,0.730999937126662,1.09775057645525,0.805238512562231,1.47202963994889,5.86556290561921,0.991256348951394,0,0.853153002140936,0.232236671860439,0.644337306610467,0.201683524623343,0,0.760902504450237,1.42358718463353,1.4822905925161,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.398282546508734,1.13800740571849,0.685491075658373,1.1270773567308,0.814605311381257,0,1.40271639780637,0.948548056863859,0.738050739898011,0.31399745568275,0.493588655687202,0.592905254174298,0.500535317148282,0,0.449724224769707,0.405720242777006,0,0.50925170356284,0.287696137450811,0.324270453550071,0.549122826376163,0,0.372140947668503,0,0,0.717589654087649,0,0.184753190166605,0.37898282354097,1.14075483509418,1.52770577197669,0.469380496577004,1.00503754465089,0,0.585400943573396,0.945810864637146,0.664394068946325,0.478364305972461,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0,0,1.12385412991454,1.28932855251423,0.491804836130026,0.252470927204373,0.631016438832513,0,0.646270193198397,1.19484398976276,0.668396022247182,1.13230612315533,0,0.876767573733936,0.395287777946524,1.92792789853084,0.425820255624806,1.42452482933804,1.30309567482861,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.775284879504663,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,1.26042765821917,0.258717367565509,0.428674070063185,0.709360934569094,0.891844088010353,1.31639216481697,1.8267896946876,0.23467170806371,0.21183207086382,0,0.49465875882444,0.645857706783622,0.844380948994182,0.835606408021955,0.820704498725306,0.874442509889552,0.927126510052548,0,0.619160603889667,0.185194527369712,0.376736914009382,0.27338845544205,0.686334519619568,0.509935289981566,0.419854356970974,0.552799895217695,0.954670618015114,0.474503990371703,0.609958401380546,0.432021363287205,0.627264888043406,0.87345025498471,0.404593039154462,0.578574190077352,0.26175594198403,0.518459893167171,0,102.028421901838,1.04661582230785,1.82004339502807,0.583353565032143,1.6790777052105,0.844780627453891,2.58185925020659,1.8228613878153,1.46803082195995,29.7148468615987,61.0623613266675,0.632022241256357,1.41907650703115,0.205421914329655,0.77952493786677,0.179026695667481,0.596044064343795,0.600977247599844,0.590758108698309,1.00966449948148,0.838274873204998,0.504130925684203,0.584747284438515,0.769694733122636,0.467507608726276,0.453460767230423,0.887943813496259,0.179427713218951,0,0.19318959403219,0.750729901804728,0.36630324853453,0.643105137237198,0.501572104035363,0,0.460325236507177,1.71868654031819,0.859265911718438,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,1.55681021376265,0.39902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|phase1_expression=0.480446541314382,0.348975407639361,1.36499771816861,0.30246421130683,0,1.17515490338323,0,0,0.422366166455,0.234064526321993,0,0,0.171200729931206,0.174840804837995,0,0,0,0.473193248037357,0.548457734422955,0.42438965179803,19.9001298953503,0,0,0.159992422793407,0.45881856213434,1.14846392823004,1.29228598847722,0.215471232685889,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0,0.997407872150954,0.816677425049476,0.418531630736908,0,0,0.588231488031014,0,0,0.251793635951155,0.101376931219515,0,0,0.872100625521786,0.219686182734472,0.58328969722285,0.139986421625363,0,0.671130424230945,0,0.336093799142464,0.257259436035947,0,0.515672092277442,4.04632921719196,5.81890077199236,1.90149421051854,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,0.384218305321555,2.7996195323289,2.02508907497536,2.3135745748652,1.71390590642282,2.20868540951614,3.06226998037385,1.91690942036473,1.83843757322004,2.20231761998777,1.78762273319263,1.68967186581868,3.56092976871523,4.20843160571084,5.73004707612436,1.11673199600552,1.68828783009504,1.68078072554491,2.06240009831567,3.84403538157578,4.84638559145781,0.075726193333184,0.226714680320357,0.869593466105033,0,0,0,1.29955283489534,0,1.68533304158102,0,0,0,0.704217098883403,0,0,0,0.649473123033642,0,0,2.51204535381932,0.776813650941515,0.148442139064825,1.04091196059682,0.913396434936424,1.15307748628029,0.904335843315735,1.17588707135705,0.628332956648377,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,1.75668478206928,0.83778682725382,1.02182822083437,0.11981512450592,0,0.254140454146129,0.599162557619291,0.915001205637253,3.39266750704734,0.869121600961382,0.767146371990992,0.41557608911912,1.62241263067758,1.12023300235348,0.870848794270651,0.758168275301024,0.841767423545896,1.82168620147785,1.14951052216736,2.34080768746954,0.753524089178575,4.01415344992834,2.43416068541215,2.62364828767241,0.776110112217047,1.72454394346274,1.32374256117473,0.703804496655795,0.876782929710299,0.834141747676794,0,0.205782136407943,1.39323986772945,0,0.51469581422943,0.284163499395593,2.07125772535502,0.469052119962192,1.2604344302271,0.946978942340841,1.37734962223183,1.54267112887378,0.697601834251224,1.3413670069981,1.40118410840603,2.13927804887525,0.820837320395476,0.891756905004413,0.730999937126662,1.09775057645525,0.805238512562231,1.47202963994889,5.86556290561921,0.991256348951394,0,0.853153002140936,0.232236671860439,0.644337306610467,0.201683524623343,0,0.760902504450237,1.42358718463353,1.4822905925161,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.398282546508734,1.13800740571849,0.685491075658373,1.1270773567308,0.814605311381257,0,1.40271639780637,0.948548056863859,0.738050739898011,0.31399745568275,0.493588655687202,0.592905254174298,0.500535317148282,0,0.449724224769707,0.405720242777006,0,0.50925170356284,0.287696137450811,0.324270453550071,0.549122826376163,0,0.372140947668503,0,0,0.717589654087649,0,0.184753190166605,0.37898282354097,1.14075483509418,1.52770577197669,0.469380496577004,1.00503754465089,0,0.585400943573396,0.945810864637146,0.664394068946325,0.478364305972461,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0,0,1.12385412991454,1.28932855251423,0.491804836130026,0.252470927204373,0.631016438832513,0,0.646270193198397,1.19484398976276,0.668396022247182,1.13230612315533,0,0.876767573733936,0.395287777946524,1.92792789853084,0.425820255624806,1.42452482933804,1.30309567482861,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.775284879504663,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,1.26042765821917,0.258717367565509,0.428674070063185,0.709360934569094,0.891844088010353,1.31639216481697,1.8267896946876,0.23467170806371,0.21183207086382,0,0.49465875882444,0.645857706783622,0.844380948994182,0.835606408021955,0.820704498725306,0.874442509889552,0.927126510052548,0,0.619160603889667,0.185194527369712,0.376736914009382,0.27338845544205,0.686334519619568,0.509935289981566,0.419854356970974,0.552799895217695,0.954670618015114,0.474503990371703,0.609958401380546,0.432021363287205,0.627264888043406,0.87345025498471,0.404593039154462,0.578574190077352,0.26175594198403,0.518459893167171,0,102.028421901838,1.04661582230785,1.82004339502807,0.583353565032143,1.6790777052105,0.844780627453891,2.58185925020659,1.8228613878153,1.46803082195995,29.7148468615987,61.0623613266675,0.632022241256357,1.41907650703115,0.205421914329655,0.77952493786677,0.179026695667481,0.596044064343795,0.600977247599844,0.590758108698309,1.00966449948148,0.838274873204998,0.504130925684203,0.584747284438515,0.769694733122636,0.467507608726276,0.453460767230423,0.887943813496259,0.179427713218951,0,0.19318959403219,0.750729901804728,0.36630324853453,0.643105137237198,0.501572104035363,0,0.460325236507177,1.71868654031819,0.859265911718438,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,1.55681021376265,0.39902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| ||
|short_description=p4@Ralgps2 | |short_description=p4@Ralgps2 | ||
}} | }} |
Revision as of 23:24, 13 November 2012
Short description: | p4@Ralgps2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ralgps2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -2bp_to_ENSMUST00000027886, ENSMUST00000063199, ENSMUST00000165172, ENSMUST00000172057, NM_001159965, NM_001159967, NM_001159968, NM_023884, NR_027640, uc007dcu.2, uc007dcv.2, uc007dcw.2, uc007dcx.2, uc007dcy.2, uc007dcz.2, uc007ddb.2, uc011wuj.1_5end |
EntrezGene: | Ralgps2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.43e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-20 | 23 |
neuron | 9.60e-14 | 33 |
neuronal stem cell | 9.60e-14 | 33 |
neuroblast | 9.60e-14 | 33 |
electrically signaling cell | 9.60e-14 | 33 |
electrically responsive cell | 2.78e-10 | 39 |
electrically active cell | 2.78e-10 | 39 |
neural cell | 1.47e-08 | 43 |
ectodermal cell | 3.49e-08 | 44 |
neurectodermal cell | 3.49e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.74e-10 | 54 |
neurectoderm | 1.56e-09 | 64 |
neural plate | 1.56e-09 | 64 |
presumptive neural plate | 1.56e-09 | 64 |
gray matter | 2.23e-09 | 34 |
structure with developmental contribution from neural crest | 4.07e-09 | 92 |
central nervous system | 4.60e-09 | 73 |
nervous system | 1.62e-08 | 75 |
neural tube | 3.83e-08 | 52 |
neural rod | 3.83e-08 | 52 |
future spinal cord | 3.83e-08 | 52 |
neural keel | 3.83e-08 | 52 |
ectoderm-derived structure | 4.28e-08 | 95 |
ectoderm | 4.28e-08 | 95 |
presumptive ectoderm | 4.28e-08 | 95 |
pre-chordal neural plate | 1.16e-07 | 49 |
ecto-epithelium | 4.52e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.