FFCP PHASE1:Mm9::chr7:31836450..31836507,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr7:31836450..31836507,- | |id=chr7:31836450..31836507,- | ||
|ontology_enrichment_celltype=CL:0000540!2.17e-13!33;CL:0000047!2.17e-13!33;CL:0000031!2.17e-13!33;CL:0000404!2.17e-13!33;CL:0000221!2.12e-11!44;CL:0000133!2.12e-11!44;CL:0002319!4.64e-11!43;CL:0000117!4.13e-10!23;CL:0000337!4.13e-10!23;CL:0000393!2.50e-08!39;CL:0000211!2.50e-08!39 | |ontology_enrichment_celltype=CL:0000540!2.17e-13!33;CL:0000047!2.17e-13!33;CL:0000031!2.17e-13!33;CL:0000404!2.17e-13!33;CL:0000221!2.12e-11!44;CL:0000133!2.12e-11!44;CL:0002319!4.64e-11!43;CL:0000117!4.13e-10!23;CL:0000337!4.13e-10!23;CL:0000393!2.50e-08!39;CL:0000211!2.50e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.38e-14,33;CL:0000047,4.38e-14,33;CL:0000031,4.38e-14,33;CL:0000404,4.38e-14,33;CL:0000221,1.87e-12,44;CL:0000133,1.87e-12,44;CL:0002319,4.31e-12,43;CL:0000117,1.30e-10,23;CL:0000337,1.30e-10,23;CL:0000393,2.58e-09,39;CL:0000211,2.58e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.01e-25!75;UBERON:0001016!2.01e-25!75;UBERON:0001017!2.36e-25!73;UBERON:0005743!2.36e-25!73;UBERON:0004121!1.82e-21!102;UBERON:0000924!1.82e-21!102;UBERON:0006601!1.82e-21!102;UBERON:0002346!3.16e-19!71;UBERON:0003075!3.16e-19!71;UBERON:0007284!3.16e-19!71;UBERON:0001049!3.36e-17!52;UBERON:0005068!3.36e-17!52;UBERON:0006241!3.36e-17!52;UBERON:0007135!3.36e-17!52;UBERON:0000955!1.83e-15!50;UBERON:0006238!1.83e-15!50;UBERON:0000033!2.66e-15!63;UBERON:0002616!5.47e-15!49;UBERON:0002020!2.67e-13!34;UBERON:0003056!1.31e-12!49;UBERON:0003080!2.77e-12!40;UBERON:0002780!1.02e-11!39;UBERON:0001890!1.02e-11!39;UBERON:0006240!1.02e-11!39;UBERON:0002791!4.40e-10!29;UBERON:0003528!4.40e-10!29;UBERON:0001893!4.40e-10!29;UBERON:0002021!5.37e-08!10;UBERON:0000411!5.37e-08!10;UBERON:0001950!5.37e-08!10;UBERON:0000153!7.90e-08!94;UBERON:0007811!9.23e-08!86 | |ontology_enrichment_uberon=UBERON:0000073!2.01e-25!75;UBERON:0001016!2.01e-25!75;UBERON:0001017!2.36e-25!73;UBERON:0005743!2.36e-25!73;UBERON:0004121!1.82e-21!102;UBERON:0000924!1.82e-21!102;UBERON:0006601!1.82e-21!102;UBERON:0002346!3.16e-19!71;UBERON:0003075!3.16e-19!71;UBERON:0007284!3.16e-19!71;UBERON:0001049!3.36e-17!52;UBERON:0005068!3.36e-17!52;UBERON:0006241!3.36e-17!52;UBERON:0007135!3.36e-17!52;UBERON:0000955!1.83e-15!50;UBERON:0006238!1.83e-15!50;UBERON:0000033!2.66e-15!63;UBERON:0002616!5.47e-15!49;UBERON:0002020!2.67e-13!34;UBERON:0003056!1.31e-12!49;UBERON:0003080!2.77e-12!40;UBERON:0002780!1.02e-11!39;UBERON:0001890!1.02e-11!39;UBERON:0006240!1.02e-11!39;UBERON:0002791!4.40e-10!29;UBERON:0003528!4.40e-10!29;UBERON:0001893!4.40e-10!29;UBERON:0002021!5.37e-08!10;UBERON:0000411!5.37e-08!10;UBERON:0001950!5.37e-08!10;UBERON:0000153!7.90e-08!94;UBERON:0007811!9.23e-08!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.31e-27,75;UBERON:0001017,3.90e-27,73;UBERON:0004121,4.71e-22,95;UBERON:0000924,4.71e-22,95;UBERON:0006601,4.71e-22,95;UBERON:0002346,2.37e-20,64;UBERON:0003075,2.37e-20,64;UBERON:0007284,2.37e-20,64;UBERON:0000073,1.12e-19,54;UBERON:0001049,1.79e-18,52;UBERON:0005068,1.79e-18,52;UBERON:0006241,1.79e-18,52;UBERON:0007135,1.79e-18,52;UBERON:0010371,1.01e-16,73;UBERON:0000955,8.15e-15,47;UBERON:0006238,8.15e-15,47;UBERON:0002020,2.23e-14,34;UBERON:0002616,2.53e-14,46;UBERON:0003056,2.10e-13,49;UBERON:0003080,4.53e-13,40;UBERON:0002780,1.81e-12,39;UBERON:0001890,1.81e-12,39;UBERON:0006240,1.81e-12,39;UBERON:0010314,1.40e-11,92;UBERON:0003528,6.11e-11,29;UBERON:0002791,6.11e-11,29;UBERON:0001893,6.11e-11,29;UBERON:0002021,2.24e-08,10;UBERON:0000411,2.24e-08,10;UBERON:0001950,2.24e-08,10;UBERON:0000956,6.80e-07,21;UBERON:0001869,6.80e-07,21;UBERON:0000203,6.80e-07,21;UBERON:0002619,7.36e-07,17 | |||
|phase1_expression=20.6592012765184,0,0,0,0,0,0,0,12.3894075493467,18.0229685267935,0.856089841127525,0,0.171200729931206,0.34968160967599,0.999329285446988,0,0,0.157731082679119,0.274228867211478,0,27.2988961384934,2.08510997521859,0.783599367416806,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73218193983378,0.971020706062307,0,0,0,91.5397872887206,0,0,0,6.43937539476668,10.062679505548,0.167782606057736,0,4.03312558970957,0,0.286533439938757,0,90.030825082521,122.725907191112,114.089652631112,0,0,0,0,0,16.4780060785123,11.1423308543251,4.14758449233911,6.34527910158946,3.78584930432488,555.01986269659,528.759287038163,19.1085646775328,14.0892842396807,13.7882817991503,148.656439349175,117.855413052628,140.24276486295,68.9765284828914,80.3261510829157,80.7415724362978,120.327872569595,112.552522006336,93.5125276394078,520.019453361023,454.165661749138,184.721850812873,8.70851223331617,13.4517376990078,0,0,0,0.539703191637817,0.649776417447669,0,10.2524426696179,0,0,0,30.844708931093,0,0,0,0,0,0,3.53970027129086,1.03575153458869,0.890652834388949,20.471268558404,19.7902560902892,13.6063143381075,20.4982791151567,18.1086608988985,1.38233250462643,0,1.15679485535929,0.884610551949874,1.7794353494215,0.441683036920787,0,1.86391761218122,20.7874365878198,14.4518227701284,2.04365644166873,0.958520996047362,1.79970819298022,0.381210681219194,167.915306772806,77.7751024791665,104.41876660579,215.715981358615,223.239594249379,125.919555003093,113.082160358227,19.8586759508117,0.746441823660558,0.252722758433675,3.99839526184301,1.04096354370163,4.36813998423599,8.64298223065676,14.1662528765572,15.988577300562,22.6761284904184,19.021450085625,36.2184719034622,3.01795190105979,9.8335161687266,11.4368230706567,12.2749610159442,10.2877482213471,3.83077383174383,3.08673204611915,5.7719937377363,0,0,0.284163499395593,1.03562886267751,2.34526059981096,0.540186184383045,3.07768156260773,0.393528463494808,1.23413690309903,0.697601834251224,0.268273401399619,0.233530684734339,0.658239399653922,0.32833492815819,0.324275238183423,0,0.439100230582101,0.536825675041487,89.3732281397541,24.1825839091318,0.660837565967596,1.58670339998127,14.7168892869311,10.6828869055802,12.7578786708872,14.722897297504,15.7888411129858,15.5985013412299,2.37264530772256,11.0348299665087,12.3154252312132,11.937388322469,10.5280607044325,3.59527763461689,2.59365659849633,2.58883655230677,10.6214024533726,6.51216521875454,5.63538678365402,6.72049381889537,7.95205197387266,3.71719845418688,3.60448261608267,0.295220295959204,0.156998727841375,0,0,0.83422552858047,0.786235980452812,0.224862112384854,0.811440485554012,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,1.48856379067401,0,0,0,0,0.369506380333209,20.4650724712124,6.19266910479698,5.09235257325564,2.11221223459652,2.1775813467436,2.61848004974615,1.95133647857799,0.472905432318573,0.221464689648775,1.11618338060241,0.983179888294428,1.03610989119537,0,0,0,0,0,166.812062997316,147.452301732992,0.163934945376675,0.504941854408746,41.9625931823621,46.4622105713,48.0394176944142,18.161628644394,25.6218475194753,22.3630459323178,34.408909642366,62.5427535930207,45.0628066859037,57.8378369559253,0.425820255624806,5.34196811001766,4.23506094319298,0.989820737835213,0,5.34117399540959,2.41858845571801,3.96070667487386,4.72483028609236,8.30074899448604,4.65170927702798,3.99887102425256,2.85197902707777,4.42451461110142,0,0,0.340439605753788,6.66226047915848,10.0899773350549,9.00215547132688,9.22169214939823,53.153907645417,78.8189808684159,80.0742816171396,0,0,9.92377791247329,1.48397627647332,1.45317984026315,0.784068024066026,0.835606408021955,0.656563598980245,4.66369338607761,254.58893966043,0.341741761595705,3.30218988741156,1.29636169158798,0.188368457004691,0,0,3.22959016988325,3.49878630809145,3.31679937130617,7.63736494412091,39.3838312008513,19.7219883113043,19.6569720295678,16.3088870891286,18.3424553546789,16.3185859125633,15.9521169549898,4.97336289769656,3.11075935900303,0,0,2.99033092087958,5.95650565645551,14.7782903141476,20.0197726390483,28.21567295696,35.793957786955,11.5881902511116,7.54987279865118,0.241584120826006,0.288030006257865,0,12.9744137785705,6.88163413004343,0.51968329191118,0.716106782669926,0.39736270956253,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.201652370273681,0.292373642219257,0.0962118416403295,0.818138315270983,1.36038230169127,0,0,0,6.18206700903009,0.187682475451182,0.549454872801795,1.50057865355346,0,483.992329122826,439.610600864354,477.221962695017,464.862858239675,249.370037196514,291.582044392424,229.507650078814,267.490794715187,236.540337489755,275.96624616372,7.26511433089237,13.5668456956351,29.8783810069735,28.2003791799221,36.053463972013,38.0556062491529,34.4482428092504,28.6388729562063,38.8312243606096,36.6410957057506,37.2614570838652,30.1802146217722,31.4635465098805,27.9789916009279,28.1433797882505,34.7694394636644,22.7133278851917,26.2356539830639,27.6097553538215,26.6430045443259,33.9440559861561,28.396128985494,26.2279808942053,26.5983942437161,27.8563766029379,29.6997273699785,31.0977553883713,23.413204317968,28.9262762491686,30.3016826695179,25.0319888242007,24.0350936996375,22.0984763311632,24.0152103838247,25.2707660385295,87.1838917003431,32.2825619654664,31.1563028370033,40.5531263985948,34.6328528017639,27.8241402744506 | |phase1_expression=20.6592012765184,0,0,0,0,0,0,0,12.3894075493467,18.0229685267935,0.856089841127525,0,0.171200729931206,0.34968160967599,0.999329285446988,0,0,0.157731082679119,0.274228867211478,0,27.2988961384934,2.08510997521859,0.783599367416806,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73218193983378,0.971020706062307,0,0,0,91.5397872887206,0,0,0,6.43937539476668,10.062679505548,0.167782606057736,0,4.03312558970957,0,0.286533439938757,0,90.030825082521,122.725907191112,114.089652631112,0,0,0,0,0,16.4780060785123,11.1423308543251,4.14758449233911,6.34527910158946,3.78584930432488,555.01986269659,528.759287038163,19.1085646775328,14.0892842396807,13.7882817991503,148.656439349175,117.855413052628,140.24276486295,68.9765284828914,80.3261510829157,80.7415724362978,120.327872569595,112.552522006336,93.5125276394078,520.019453361023,454.165661749138,184.721850812873,8.70851223331617,13.4517376990078,0,0,0,0.539703191637817,0.649776417447669,0,10.2524426696179,0,0,0,30.844708931093,0,0,0,0,0,0,3.53970027129086,1.03575153458869,0.890652834388949,20.471268558404,19.7902560902892,13.6063143381075,20.4982791151567,18.1086608988985,1.38233250462643,0,1.15679485535929,0.884610551949874,1.7794353494215,0.441683036920787,0,1.86391761218122,20.7874365878198,14.4518227701284,2.04365644166873,0.958520996047362,1.79970819298022,0.381210681219194,167.915306772806,77.7751024791665,104.41876660579,215.715981358615,223.239594249379,125.919555003093,113.082160358227,19.8586759508117,0.746441823660558,0.252722758433675,3.99839526184301,1.04096354370163,4.36813998423599,8.64298223065676,14.1662528765572,15.988577300562,22.6761284904184,19.021450085625,36.2184719034622,3.01795190105979,9.8335161687266,11.4368230706567,12.2749610159442,10.2877482213471,3.83077383174383,3.08673204611915,5.7719937377363,0,0,0.284163499395593,1.03562886267751,2.34526059981096,0.540186184383045,3.07768156260773,0.393528463494808,1.23413690309903,0.697601834251224,0.268273401399619,0.233530684734339,0.658239399653922,0.32833492815819,0.324275238183423,0,0.439100230582101,0.536825675041487,89.3732281397541,24.1825839091318,0.660837565967596,1.58670339998127,14.7168892869311,10.6828869055802,12.7578786708872,14.722897297504,15.7888411129858,15.5985013412299,2.37264530772256,11.0348299665087,12.3154252312132,11.937388322469,10.5280607044325,3.59527763461689,2.59365659849633,2.58883655230677,10.6214024533726,6.51216521875454,5.63538678365402,6.72049381889537,7.95205197387266,3.71719845418688,3.60448261608267,0.295220295959204,0.156998727841375,0,0,0.83422552858047,0.786235980452812,0.224862112384854,0.811440485554012,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,1.48856379067401,0,0,0,0,0.369506380333209,20.4650724712124,6.19266910479698,5.09235257325564,2.11221223459652,2.1775813467436,2.61848004974615,1.95133647857799,0.472905432318573,0.221464689648775,1.11618338060241,0.983179888294428,1.03610989119537,0,0,0,0,0,166.812062997316,147.452301732992,0.163934945376675,0.504941854408746,41.9625931823621,46.4622105713,48.0394176944142,18.161628644394,25.6218475194753,22.3630459323178,34.408909642366,62.5427535930207,45.0628066859037,57.8378369559253,0.425820255624806,5.34196811001766,4.23506094319298,0.989820737835213,0,5.34117399540959,2.41858845571801,3.96070667487386,4.72483028609236,8.30074899448604,4.65170927702798,3.99887102425256,2.85197902707777,4.42451461110142,0,0,0.340439605753788,6.66226047915848,10.0899773350549,9.00215547132688,9.22169214939823,53.153907645417,78.8189808684159,80.0742816171396,0,0,9.92377791247329,1.48397627647332,1.45317984026315,0.784068024066026,0.835606408021955,0.656563598980245,4.66369338607761,254.58893966043,0.341741761595705,3.30218988741156,1.29636169158798,0.188368457004691,0,0,3.22959016988325,3.49878630809145,3.31679937130617,7.63736494412091,39.3838312008513,19.7219883113043,19.6569720295678,16.3088870891286,18.3424553546789,16.3185859125633,15.9521169549898,4.97336289769656,3.11075935900303,0,0,2.99033092087958,5.95650565645551,14.7782903141476,20.0197726390483,28.21567295696,35.793957786955,11.5881902511116,7.54987279865118,0.241584120826006,0.288030006257865,0,12.9744137785705,6.88163413004343,0.51968329191118,0.716106782669926,0.39736270956253,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.201652370273681,0.292373642219257,0.0962118416403295,0.818138315270983,1.36038230169127,0,0,0,6.18206700903009,0.187682475451182,0.549454872801795,1.50057865355346,0,483.992329122826,439.610600864354,477.221962695017,464.862858239675,249.370037196514,291.582044392424,229.507650078814,267.490794715187,236.540337489755,275.96624616372,7.26511433089237,13.5668456956351,29.8783810069735,28.2003791799221,36.053463972013,38.0556062491529,34.4482428092504,28.6388729562063,38.8312243606096,36.6410957057506,37.2614570838652,30.1802146217722,31.4635465098805,27.9789916009279,28.1433797882505,34.7694394636644,22.7133278851917,26.2356539830639,27.6097553538215,26.6430045443259,33.9440559861561,28.396128985494,26.2279808942053,26.5983942437161,27.8563766029379,29.6997273699785,31.0977553883713,23.413204317968,28.9262762491686,30.3016826695179,25.0319888242007,24.0350936996375,22.0984763311632,24.0152103838247,25.2707660385295,87.1838917003431,32.2825619654664,31.1563028370033,40.5531263985948,34.6328528017639,27.8241402744506 | ||
|short_description=p1@Fxyd7 | |short_description=p1@Fxyd7 | ||
}} | }} |
Revision as of 13:42, 14 November 2012
Short description: | p1@Fxyd7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fxyd7_5end |
Coexpression cluster: | MCL_coexpression_mm9:537 |
Association with transcript: | 0bp_to_ENSMUST00000073892, NM_022007, uc009ghr.1, uc009ghs.1_5end |
EntrezGene: | Fxyd7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.38e-14 | 33 |
neuronal stem cell | 4.38e-14 | 33 |
neuroblast | 4.38e-14 | 33 |
electrically signaling cell | 4.38e-14 | 33 |
ectodermal cell | 1.87e-12 | 44 |
neurectodermal cell | 1.87e-12 | 44 |
neural cell | 4.31e-12 | 43 |
CNS neuron (sensu Vertebrata) | 1.30e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-10 | 23 |
electrically responsive cell | 2.58e-09 | 39 |
electrically active cell | 2.58e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.31e-27 | 75 |
central nervous system | 3.90e-27 | 73 |
ectoderm-derived structure | 4.71e-22 | 95 |
ectoderm | 4.71e-22 | 95 |
presumptive ectoderm | 4.71e-22 | 95 |
neurectoderm | 2.37e-20 | 64 |
neural plate | 2.37e-20 | 64 |
presumptive neural plate | 2.37e-20 | 64 |
regional part of nervous system | 1.12e-19 | 54 |
neural tube | 1.79e-18 | 52 |
neural rod | 1.79e-18 | 52 |
future spinal cord | 1.79e-18 | 52 |
neural keel | 1.79e-18 | 52 |
ecto-epithelium | 1.01e-16 | 73 |
brain | 8.15e-15 | 47 |
future brain | 8.15e-15 | 47 |
gray matter | 2.23e-14 | 34 |
regional part of brain | 2.53e-14 | 46 |
pre-chordal neural plate | 2.10e-13 | 49 |
anterior neural tube | 4.53e-13 | 40 |
regional part of forebrain | 1.81e-12 | 39 |
forebrain | 1.81e-12 | 39 |
future forebrain | 1.81e-12 | 39 |
structure with developmental contribution from neural crest | 1.40e-11 | 92 |
brain grey matter | 6.11e-11 | 29 |
regional part of telencephalon | 6.11e-11 | 29 |
telencephalon | 6.11e-11 | 29 |
occipital lobe | 2.24e-08 | 10 |
visual cortex | 2.24e-08 | 10 |
neocortex | 2.24e-08 | 10 |
cerebral cortex | 6.80e-07 | 21 |
cerebral hemisphere | 6.80e-07 | 21 |
pallium | 6.80e-07 | 21 |
regional part of cerebral cortex | 7.36e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.