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FFCP PHASE1:Mm9::chr3:107989328..107989342,+: Difference between revisions

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|id=chr3:107989328..107989342,+
|id=chr3:107989328..107989342,+
|ontology_enrichment_celltype=CL:0000540!5.71e-13!33;CL:0000047!5.71e-13!33;CL:0000031!5.71e-13!33;CL:0000404!5.71e-13!33;CL:0000117!7.37e-11!23;CL:0000337!7.37e-11!23;CL:0000393!2.82e-09!39;CL:0000211!2.82e-09!39;CL:0000221!3.83e-09!44;CL:0000133!3.83e-09!44;CL:0002319!4.81e-09!43
|ontology_enrichment_celltype=CL:0000540!5.71e-13!33;CL:0000047!5.71e-13!33;CL:0000031!5.71e-13!33;CL:0000404!5.71e-13!33;CL:0000117!7.37e-11!23;CL:0000337!7.37e-11!23;CL:0000393!2.82e-09!39;CL:0000211!2.82e-09!39;CL:0000221!3.83e-09!44;CL:0000133!3.83e-09!44;CL:0002319!4.81e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.56e-17,23;CL:0000337,2.56e-17,23;CL:0000540,6.17e-13,33;CL:0000047,6.17e-13,33;CL:0000031,6.17e-13,33;CL:0000404,6.17e-13,33;CL:0000393,1.91e-10,39;CL:0000211,1.91e-10,39;CL:0002319,3.57e-09,43;CL:0000221,6.81e-09,44;CL:0000133,6.81e-09,44;CL:0002610,7.74e-09,3;CL:0002614,2.77e-08,3;CL:0000120,5.13e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.62e-22!73;UBERON:0005743!3.62e-22!73;UBERON:0000073!7.24e-22!75;UBERON:0001016!7.24e-22!75;UBERON:0004121!1.28e-20!102;UBERON:0000924!1.28e-20!102;UBERON:0006601!1.28e-20!102;UBERON:0000033!5.35e-18!63;UBERON:0002346!6.03e-18!71;UBERON:0003075!6.03e-18!71;UBERON:0007284!6.03e-18!71;UBERON:0001049!9.45e-17!52;UBERON:0005068!9.45e-17!52;UBERON:0006241!9.45e-17!52;UBERON:0007135!9.45e-17!52;UBERON:0000955!1.05e-16!50;UBERON:0006238!1.05e-16!50;UBERON:0002616!6.93e-16!49;UBERON:0002020!7.85e-14!34;UBERON:0003056!8.74e-13!49;UBERON:0003080!4.37e-12!40;UBERON:0002791!1.80e-11!29;UBERON:0003528!1.80e-11!29;UBERON:0001893!1.80e-11!29;UBERON:0002780!2.26e-11!39;UBERON:0001890!2.26e-11!39;UBERON:0006240!2.26e-11!39;UBERON:0007811!2.70e-09!86;UBERON:0000153!1.23e-08!94;UBERON:0000956!7.93e-08!21;UBERON:0001869!7.93e-08!21;UBERON:0000203!7.93e-08!21;UBERON:0002021!2.70e-07!10;UBERON:0000411!2.70e-07!10;UBERON:0001950!2.70e-07!10
|ontology_enrichment_uberon=UBERON:0001017!3.62e-22!73;UBERON:0005743!3.62e-22!73;UBERON:0000073!7.24e-22!75;UBERON:0001016!7.24e-22!75;UBERON:0004121!1.28e-20!102;UBERON:0000924!1.28e-20!102;UBERON:0006601!1.28e-20!102;UBERON:0000033!5.35e-18!63;UBERON:0002346!6.03e-18!71;UBERON:0003075!6.03e-18!71;UBERON:0007284!6.03e-18!71;UBERON:0001049!9.45e-17!52;UBERON:0005068!9.45e-17!52;UBERON:0006241!9.45e-17!52;UBERON:0007135!9.45e-17!52;UBERON:0000955!1.05e-16!50;UBERON:0006238!1.05e-16!50;UBERON:0002616!6.93e-16!49;UBERON:0002020!7.85e-14!34;UBERON:0003056!8.74e-13!49;UBERON:0003080!4.37e-12!40;UBERON:0002791!1.80e-11!29;UBERON:0003528!1.80e-11!29;UBERON:0001893!1.80e-11!29;UBERON:0002780!2.26e-11!39;UBERON:0001890!2.26e-11!39;UBERON:0006240!2.26e-11!39;UBERON:0007811!2.70e-09!86;UBERON:0000153!1.23e-08!94;UBERON:0000956!7.93e-08!21;UBERON:0001869!7.93e-08!21;UBERON:0000203!7.93e-08!21;UBERON:0002021!2.70e-07!10;UBERON:0000411!2.70e-07!10;UBERON:0001950!2.70e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-35,73;UBERON:0001016,2.17e-34,75;UBERON:0000073,2.37e-33,54;UBERON:0001049,2.59e-29,52;UBERON:0005068,2.59e-29,52;UBERON:0006241,2.59e-29,52;UBERON:0007135,2.59e-29,52;UBERON:0000955,6.06e-26,47;UBERON:0006238,6.06e-26,47;UBERON:0004121,1.06e-25,95;UBERON:0000924,1.06e-25,95;UBERON:0006601,1.06e-25,95;UBERON:0002616,5.43e-24,46;UBERON:0002346,1.12e-22,64;UBERON:0003075,1.12e-22,64;UBERON:0007284,1.12e-22,64;UBERON:0002020,8.12e-22,34;UBERON:0002021,1.85e-19,10;UBERON:0000411,1.85e-19,10;UBERON:0001950,1.85e-19,10;UBERON:0010371,3.94e-19,73;UBERON:0003528,1.68e-18,29;UBERON:0002791,1.68e-18,29;UBERON:0001893,1.68e-18,29;UBERON:0003080,1.69e-18,40;UBERON:0002780,7.89e-17,39;UBERON:0001890,7.89e-17,39;UBERON:0006240,7.89e-17,39;UBERON:0003056,2.79e-14,49;UBERON:0010314,6.33e-14,92;UBERON:0002619,4.75e-13,17;UBERON:0000956,1.84e-12,21;UBERON:0001869,1.84e-12,21;UBERON:0000203,1.84e-12,21;UBERON:0003076,9.10e-12,12;UBERON:0003057,9.10e-12,12;UBERON:0002950,1.18e-10,4;UBERON:0001891,1.18e-10,4;UBERON:0009616,1.18e-10,4;UBERON:0010286,1.18e-10,4;UBERON:0000025,4.52e-10,114;UBERON:0004111,6.35e-10,122;UBERON:0011216,8.53e-10,194;UBERON:0004684,7.74e-09,3;UBERON:0002275,7.74e-09,3;UBERON:0002038,2.77e-08,3;UBERON:0009663,2.77e-08,3;UBERON:0009661,2.77e-08,3;UBERON:0000125,2.77e-08,3;UBERON:0002308,2.77e-08,3;UBERON:0002420,2.44e-07,8;UBERON:0007245,2.44e-07,8;UBERON:0010009,2.44e-07,8;UBERON:0010011,2.44e-07,8;UBERON:0000454,2.44e-07,8;UBERON:0004733,6.20e-07,6;UBERON:0004732,6.20e-07,6;UBERON:0002028,6.20e-07,6;UBERON:0007277,6.20e-07,6
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0,0,0,0,0.336093799142464,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.420649922702764,1.14260393761521,1.32521124570968,0.122490799214954,0,0,6.60695285996332,3.95830748064082,3.37934373163736,1.31886287730194,0.457438218012048,1.04182674111352,4.74611098302348,2.25105044012672,2.29197371665215,0.294628585473668,0.142371680799103,1.3047961207771,0,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0.461230994512117,0,0.117588707135705,0.125666591329675,0,0,0,0.808834249737046,0,0.484875253135222,0,2.04946557908083,2.93225389538837,0,0,0,0.127070227073065,3.89455662452539,0.915001205637253,0,3.47648640384553,4.34716277461562,4.36354893575076,2.92034273521964,0.101839363850316,0,0.252722758433675,0.210441855886474,0,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0,0.517406741478031,0.215567992932842,0,0.351902248327898,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0,0,1.05144974282064,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,4.0137647496948,2.93029216480508,0.163934945376675,0,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,1.58115111178609,12.2102100240287,0,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.329098041204242,0.608929898229199,0,0,1.10264199027481,0.16488625294148,0,0.120625849856312,0,0,0,3.33765543618917,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.436725127492355,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,1.6942555278512,2.76195141904306,2.29158205375759,2.06223818812425,4.7955776383945,0,4.05013500139084,3.60256962579376,3.62513927187364,3.62432218226274,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.512201219238954,0.229741875822453,0.476293691283074,0.463537303779422,0.38581844092741,0,0.294397840268795,0,0.532427418478012,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.548783918618318,0.263069711437843,0,0,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0.499621155875892,0.935726433781634,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0,0,0,0,0.336093799142464,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.420649922702764,1.14260393761521,1.32521124570968,0.122490799214954,0,0,6.60695285996332,3.95830748064082,3.37934373163736,1.31886287730194,0.457438218012048,1.04182674111352,4.74611098302348,2.25105044012672,2.29197371665215,0.294628585473668,0.142371680799103,1.3047961207771,0,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0.461230994512117,0,0.117588707135705,0.125666591329675,0,0,0,0.808834249737046,0,0.484875253135222,0,2.04946557908083,2.93225389538837,0,0,0,0.127070227073065,3.89455662452539,0.915001205637253,0,3.47648640384553,4.34716277461562,4.36354893575076,2.92034273521964,0.101839363850316,0,0.252722758433675,0.210441855886474,0,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0,0.517406741478031,0.215567992932842,0,0.351902248327898,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0,0,1.05144974282064,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,4.0137647496948,2.93029216480508,0.163934945376675,0,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,1.58115111178609,12.2102100240287,0,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.329098041204242,0.608929898229199,0,0,1.10264199027481,0.16488625294148,0,0.120625849856312,0,0,0,3.33765543618917,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.436725127492355,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,1.6942555278512,2.76195141904306,2.29158205375759,2.06223818812425,4.7955776383945,0,4.05013500139084,3.60256962579376,3.62513927187364,3.62432218226274,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.512201219238954,0.229741875822453,0.476293691283074,0.463537303779422,0.38581844092741,0,0.294397840268795,0,0.532427418478012,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.548783918618318,0.263069711437843,0,0,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0.499621155875892,0.935726433781634,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843
|short_description=p3@Amigo1
|short_description=p3@Amigo1
}}
}}

Revision as of 03:10, 14 November 2012

Short description:p3@Amigo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Amigo1_5end
Coexpression cluster:MCL_coexpression_mm9:251
Association with transcript: 52bp_to_ENSMUST00000106656_5end
EntrezGene:Amigo1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Amigo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.61e-3573
nervous system2.17e-3475
regional part of nervous system2.37e-3354
neural tube2.59e-2952
neural rod2.59e-2952
future spinal cord2.59e-2952
neural keel2.59e-2952
brain6.06e-2647
future brain6.06e-2647
ectoderm-derived structure1.06e-2595
ectoderm1.06e-2595
presumptive ectoderm1.06e-2595
regional part of brain5.43e-2446
neurectoderm1.12e-2264
neural plate1.12e-2264
presumptive neural plate1.12e-2264
gray matter8.12e-2234
occipital lobe1.85e-1910
visual cortex1.85e-1910
neocortex1.85e-1910
ecto-epithelium3.94e-1973
brain grey matter1.68e-1829
regional part of telencephalon1.68e-1829
telencephalon1.68e-1829
anterior neural tube1.69e-1840
regional part of forebrain7.89e-1739
forebrain7.89e-1739
future forebrain7.89e-1739
pre-chordal neural plate2.79e-1449
structure with developmental contribution from neural crest6.33e-1492
regional part of cerebral cortex4.75e-1317
cerebral cortex1.84e-1221
cerebral hemisphere1.84e-1221
pallium1.84e-1221
posterior neural tube9.10e-1212
chordal neural plate9.10e-1212
regional part of midbrain1.18e-104
midbrain1.18e-104
presumptive midbrain1.18e-104
midbrain neural tube1.18e-104
tube4.52e-10114
anatomical conduit6.35e-10122
organ system subdivision8.53e-10194
raphe nuclei7.74e-093
reticular formation7.74e-093
substantia nigra2.77e-083
telencephalic nucleus2.77e-083
midbrain nucleus2.77e-083
neural nucleus2.77e-083
nucleus of brain2.77e-083
basal ganglion2.44e-078
nuclear complex of neuraxis2.44e-078
aggregate regional part of brain2.44e-078
collection of basal ganglia2.44e-078
cerebral subcortex2.44e-078
segmental subdivision of hindbrain6.20e-076
segmental subdivision of nervous system6.20e-076
hindbrain6.20e-076
presumptive hindbrain6.20e-076







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