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FFCP PHASE1:Mm9::chr9:43880279..43880294,+: Difference between revisions

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|id=chr9:43880279..43880294,+
|id=chr9:43880279..43880294,+
|ontology_enrichment_celltype=CL:0000221!3.78e-20!44;CL:0000133!3.78e-20!44;CL:0002319!1.18e-19!43;CL:0000055!4.41e-17!50;CL:0000540!6.21e-14!33;CL:0000047!6.21e-14!33;CL:0000031!6.21e-14!33;CL:0000404!6.21e-14!33;CL:0000393!2.34e-12!39;CL:0000211!2.34e-12!39;CL:0002321!7.74e-09!70;CL:0000220!7.74e-09!70;CL:0000117!3.18e-08!23;CL:0000337!3.18e-08!23;CL:0000107!5.11e-07!9;CL:0000333!9.15e-07!10;CL:0000095!9.15e-07!10;CL:0000243!9.15e-07!10;CL:0000123!9.15e-07!10;CL:0000125!9.15e-07!10;CL:0000030!9.15e-07!10;CL:0000339!9.15e-07!10
|ontology_enrichment_celltype=CL:0000221!3.78e-20!44;CL:0000133!3.78e-20!44;CL:0002319!1.18e-19!43;CL:0000055!4.41e-17!50;CL:0000540!6.21e-14!33;CL:0000047!6.21e-14!33;CL:0000031!6.21e-14!33;CL:0000404!6.21e-14!33;CL:0000393!2.34e-12!39;CL:0000211!2.34e-12!39;CL:0002321!7.74e-09!70;CL:0000220!7.74e-09!70;CL:0000117!3.18e-08!23;CL:0000337!3.18e-08!23;CL:0000107!5.11e-07!9;CL:0000333!9.15e-07!10;CL:0000095!9.15e-07!10;CL:0000243!9.15e-07!10;CL:0000123!9.15e-07!10;CL:0000125!9.15e-07!10;CL:0000030!9.15e-07!10;CL:0000339!9.15e-07!10
|ontology_enrichment_celltype_v019_2=CL:0000221,1.32e-26,44;CL:0000133,1.32e-26,44;CL:0002319,7.97e-26,43;CL:0000540,1.82e-16,33;CL:0000047,1.82e-16,33;CL:0000031,1.82e-16,33;CL:0000404,1.82e-16,33;CL:0000393,1.11e-12,39;CL:0000211,1.11e-12,39;CL:0002321,2.32e-12,70;CL:0000333,1.17e-10,10;CL:0000095,1.17e-10,10;CL:0000243,1.17e-10,10;CL:0000123,1.17e-10,10;CL:0000125,1.17e-10,10;CL:0000030,1.17e-10,10;CL:0000339,1.17e-10,10;CL:0000107,1.80e-10,9;CL:0002453,1.21e-08,8;CL:0000117,4.83e-08,23;CL:0000337,4.83e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.94e-35!75;UBERON:0001016!6.94e-35!75;UBERON:0004121!6.61e-34!102;UBERON:0000924!6.61e-34!102;UBERON:0006601!6.61e-34!102;UBERON:0001017!2.51e-33!73;UBERON:0005743!2.51e-33!73;UBERON:0000033!1.42e-23!63;UBERON:0002346!2.24e-23!71;UBERON:0003075!2.24e-23!71;UBERON:0007284!2.24e-23!71;UBERON:0001049!2.67e-20!52;UBERON:0005068!2.67e-20!52;UBERON:0006241!2.67e-20!52;UBERON:0007135!2.67e-20!52;UBERON:0000955!1.15e-19!50;UBERON:0006238!1.15e-19!50;UBERON:0002616!4.18e-19!49;UBERON:0003056!2.50e-18!49;UBERON:0003080!7.15e-15!40;UBERON:0002780!3.49e-14!39;UBERON:0001890!3.49e-14!39;UBERON:0006240!3.49e-14!39;UBERON:0002020!4.57e-13!34;UBERON:0007811!3.65e-11!86;UBERON:0002791!8.55e-11!29;UBERON:0003528!8.55e-11!29;UBERON:0001893!8.55e-11!29;UBERON:0004111!1.31e-09!122;UBERON:0000153!1.75e-09!94;UBERON:0000025!3.20e-09!114;UBERON:0000010!2.90e-08!11;UBERON:0000956!2.94e-07!21;UBERON:0001869!2.94e-07!21;UBERON:0000203!2.94e-07!21;UBERON:0002619!3.68e-07!17;UBERON:0002410!5.11e-07!9
|ontology_enrichment_uberon=UBERON:0000073!6.94e-35!75;UBERON:0001016!6.94e-35!75;UBERON:0004121!6.61e-34!102;UBERON:0000924!6.61e-34!102;UBERON:0006601!6.61e-34!102;UBERON:0001017!2.51e-33!73;UBERON:0005743!2.51e-33!73;UBERON:0000033!1.42e-23!63;UBERON:0002346!2.24e-23!71;UBERON:0003075!2.24e-23!71;UBERON:0007284!2.24e-23!71;UBERON:0001049!2.67e-20!52;UBERON:0005068!2.67e-20!52;UBERON:0006241!2.67e-20!52;UBERON:0007135!2.67e-20!52;UBERON:0000955!1.15e-19!50;UBERON:0006238!1.15e-19!50;UBERON:0002616!4.18e-19!49;UBERON:0003056!2.50e-18!49;UBERON:0003080!7.15e-15!40;UBERON:0002780!3.49e-14!39;UBERON:0001890!3.49e-14!39;UBERON:0006240!3.49e-14!39;UBERON:0002020!4.57e-13!34;UBERON:0007811!3.65e-11!86;UBERON:0002791!8.55e-11!29;UBERON:0003528!8.55e-11!29;UBERON:0001893!8.55e-11!29;UBERON:0004111!1.31e-09!122;UBERON:0000153!1.75e-09!94;UBERON:0000025!3.20e-09!114;UBERON:0000010!2.90e-08!11;UBERON:0000956!2.94e-07!21;UBERON:0001869!2.94e-07!21;UBERON:0000203!2.94e-07!21;UBERON:0002619!3.68e-07!17;UBERON:0002410!5.11e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.11e-43,75;UBERON:0004121,1.79e-42,95;UBERON:0000924,1.79e-42,95;UBERON:0006601,1.79e-42,95;UBERON:0001017,9.21e-41,73;UBERON:0002346,1.89e-28,64;UBERON:0003075,1.89e-28,64;UBERON:0007284,1.89e-28,64;UBERON:0010371,1.83e-25,73;UBERON:0000073,8.36e-23,54;UBERON:0001049,6.70e-21,52;UBERON:0005068,6.70e-21,52;UBERON:0006241,6.70e-21,52;UBERON:0007135,6.70e-21,52;UBERON:0000955,3.94e-17,47;UBERON:0006238,3.94e-17,47;UBERON:0010314,4.76e-17,92;UBERON:0003056,5.44e-17,49;UBERON:0002616,2.34e-16,46;UBERON:0002020,3.08e-14,34;UBERON:0003080,1.10e-12,40;UBERON:0000010,1.70e-12,11;UBERON:0002780,8.78e-12,39;UBERON:0001890,8.78e-12,39;UBERON:0006240,8.78e-12,39;UBERON:0011216,1.28e-11,194;UBERON:0003528,7.38e-11,29;UBERON:0002791,7.38e-11,29;UBERON:0001893,7.38e-11,29;UBERON:0002410,1.80e-10,9;UBERON:0003076,1.12e-09,12;UBERON:0003057,1.12e-09,12;UBERON:0000025,2.43e-09,114;UBERON:0004111,5.05e-09,122;UBERON:0002420,3.62e-07,8;UBERON:0007245,3.62e-07,8;UBERON:0010009,3.62e-07,8;UBERON:0010011,3.62e-07,8;UBERON:0000454,3.62e-07,8;UBERON:0000119,8.44e-07,176;UBERON:0002619,9.04e-07,17
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.367093504323363,0,13.5175596955877,12.3024262331304,14.9711022287198,6.85933465964276,14.3752564364972,0,0,0,0,0.286533439938757,0,1.61853168687678,0,3.1691570175309,1.0165335962074,0,0,0.988866362566974,0,11.9840044207362,34.9638657842615,0.103689612308478,0.675029691658453,0.210324961351382,3.99911378165325,1.76694832761291,0.979926393719632,0.766763768145891,0.919218786610021,5.50579404996943,5.10749352340751,4.91540906419979,1.97829431595291,1.73826522844578,1.04182674111352,2.51264699101243,6.19038871034848,4.27835093775068,2.06240009831567,2.98980529678116,2.05039390407831,4.92220256665696,5.44115232768856,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,2.39433813620357,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0,0,0,0.461230994512117,0.150722640552623,0.352766121407114,0.376999773989026,0,0.289198713839823,0,0.161766849947409,0,0,0,2.92780797011547,4.81727425670947,0.255457055208591,0,0,0,6.89036941262184,6.40500843946077,1.13088916901578,2.08589184230732,3.3243009452943,8.10373373782284,4.54275536589721,0,0.497627882440372,0,0.420883711772948,2.08192708740326,1.83921683546778,1.44049703844279,1.35634336052144,3.26575195926374,2.43416068541215,1.40552586839593,1.81092359517311,0.215567992932842,0,0.351902248327898,0,0,0,0.411564272815887,0,0,0,0.284163499395593,0.207125772535502,0,0,0,0,0.154267112887378,0,0.536546802799238,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0.219550115291051,0.671032093801859,5.25724871410318,2.77842453424068,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.05290631816363,0,0,0.339490171550376,1.17345124144251,1.84256883185997,2.61848004974615,2.92700471786698,2.20689201748667,1.7717175171902,0.637819074629948,2.62181303545181,0.863424909329478,2.60368305446721,0,0,0,0.827810238914197,6.74312477948726,3.16471553798949,0,0,6.31016438832513,3.51394869866975,2.36965737506079,4.77937595905104,6.46116154838943,5.09537755419898,7.2865926301481,7.3063964477828,5.13874111330481,3.21321316421807,4.68402281187286,0,0,9.73323725537959,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0.900305470156551,1.94038025674132,0.857348140126369,0.709360934569094,0.356737635204141,1.48094118541909,4.56697423671899,0.469343416127421,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0,0.164140899745061,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,1.50145980360946,0.36630324853453,0.214368379079066,0.501572104035363,1.12950368523413,3.22227665555024,1.71868654031819,1.3748254587495,0,3.7769694869485,1.35004500046361,0.900642406448441,4.07828168085784,3.62432218226274,0.726511433089237,0.798049746802062,0.341467211508268,0.243106717068294,0.838452650511929,0.367687016900028,0.666740183404846,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.565879024158229,0.561849044819294,0.448176066834085,0.746661096422973,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,1.03039244094078,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.752875043322645,0.761531471025089,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.593175090620871,0.197008964751127,0,0.464810523557898,0.771626443924566,1.49886346762768,0.701794825336225,0,0.382576664137687,0.220591419119515,0
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|short_description=p@chr9:43880279..43880294,+
|short_description=p@chr9:43880279..43880294,+
}}
}}

Revision as of 16:21, 14 November 2012

Short description:p@chr9:43880279..43880294, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:43880279..43880294, +
Coexpression cluster:MCL_coexpression_mm9:558
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr9:43880279..43880294+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.52
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C811.98
Mouse Microglia, donor2.CNhs12634.11736-123E834.96
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D94.92
Mouse Schwann, donor2.CNhs12573.11746-123F95.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B19.05
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G69.73
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system4.11e-4375
ectoderm-derived structure1.79e-4295
ectoderm1.79e-4295
presumptive ectoderm1.79e-4295
central nervous system9.21e-4173
neurectoderm1.89e-2864
neural plate1.89e-2864
presumptive neural plate1.89e-2864
ecto-epithelium1.83e-2573
regional part of nervous system8.36e-2354
neural tube6.70e-2152
neural rod6.70e-2152
future spinal cord6.70e-2152
neural keel6.70e-2152
brain3.94e-1747
future brain3.94e-1747
structure with developmental contribution from neural crest4.76e-1792
pre-chordal neural plate5.44e-1749
regional part of brain2.34e-1646
gray matter3.08e-1434
anterior neural tube1.10e-1240
peripheral nervous system1.70e-1211
regional part of forebrain8.78e-1239
forebrain8.78e-1239
future forebrain8.78e-1239
organ system subdivision1.28e-11194
brain grey matter7.38e-1129
regional part of telencephalon7.38e-1129
telencephalon7.38e-1129
autonomic nervous system1.80e-109
posterior neural tube1.12e-0912
chordal neural plate1.12e-0912
tube2.43e-09114
anatomical conduit5.05e-09122
basal ganglion3.62e-078
nuclear complex of neuraxis3.62e-078
aggregate regional part of brain3.62e-078
collection of basal ganglia3.62e-078
cerebral subcortex3.62e-078
cell layer8.44e-07176
regional part of cerebral cortex9.04e-0717







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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