FFCP PHASE1:Mm9::chr12:28021693..28021702,-: Difference between revisions
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|id=chr12:28021693..28021702,- | |id=chr12:28021693..28021702,- | ||
|ontology_enrichment_celltype=CL:0000117!9.77e-10!23;CL:0000337!9.77e-10!23;CL:0000540!6.13e-08!33;CL:0000047!6.13e-08!33;CL:0000031!6.13e-08!33;CL:0000404!6.13e-08!33;CL:0002609!6.57e-08!6 | |ontology_enrichment_celltype=CL:0000117!9.77e-10!23;CL:0000337!9.77e-10!23;CL:0000540!6.13e-08!33;CL:0000047!6.13e-08!33;CL:0000031!6.13e-08!33;CL:0000404!6.13e-08!33;CL:0002609!6.57e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.28e-34,6;CL:0002608,7.36e-18,3;CL:0000117,5.55e-14,23;CL:0000337,5.55e-14,23;CL:0000540,7.66e-10,33;CL:0000047,7.66e-10,33;CL:0000031,7.66e-10,33;CL:0000404,7.66e-10,33;CL:0000393,2.28e-08,39;CL:0000211,2.28e-08,39;CL:0002319,1.31e-07,43;CL:0000221,1.92e-07,44;CL:0000133,1.92e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!6.24e-08!49 | |ontology_enrichment_uberon=UBERON:0003056!6.24e-08!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.34e-11,29;UBERON:0002791,3.34e-11,29;UBERON:0001893,3.34e-11,29;UBERON:0000956,3.81e-10,21;UBERON:0001869,3.81e-10,21;UBERON:0000203,3.81e-10,21;UBERON:0002020,1.35e-09,34;UBERON:0002780,2.12e-08,39;UBERON:0001890,2.12e-08,39;UBERON:0006240,2.12e-08,39;UBERON:0001954,3.21e-08,7;UBERON:0003022,3.21e-08,7;UBERON:0002421,3.21e-08,7;UBERON:0000349,3.21e-08,7;UBERON:0002600,3.21e-08,7;UBERON:0003080,3.39e-08,40;UBERON:0002616,3.73e-07,46;UBERON:0000955,5.25e-07,47;UBERON:0006238,5.25e-07,47;UBERON:0003056,9.97e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0,0,1.97010263386108,1.89008313664367,0.841299845405528,0,0.220868540951614,1.71487118900936,2.49198224647415,0,0,0,0,0.395658863190582,0.548925861614458,0.52091337055676,0,0,0,0,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,1.25654352112864,0,0,0,0,0,0,0,0,0.390361328888111,0,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0.378212160335639,0,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0,0,0,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.749431733813838,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0,0,1.97010263386108,1.89008313664367,0.841299845405528,0,0.220868540951614,1.71487118900936,2.49198224647415,0,0,0,0,0.395658863190582,0.548925861614458,0.52091337055676,0,0,0,0,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,1.25654352112864,0,0,0,0,0,0,0,0,0.390361328888111,0,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0.378212160335639,0,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0,0,0,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.749431733813838,0,0,0,0,0 | ||
|short_description=p@chr12:28021693..28021702,- | |short_description=p@chr12:28021693..28021702,- | ||
}} | }} |
Revision as of 14:40, 13 November 2012
Short description: | p@chr12:28021693..28021702, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28021693..28021702, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.28e-34 | 6 |
hippocampal neuron | 7.36e-18 | 3 |
CNS neuron (sensu Vertebrata) | 5.55e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.55e-14 | 23 |
neuron | 7.66e-10 | 33 |
neuronal stem cell | 7.66e-10 | 33 |
neuroblast | 7.66e-10 | 33 |
electrically signaling cell | 7.66e-10 | 33 |
electrically responsive cell | 2.28e-08 | 39 |
electrically active cell | 2.28e-08 | 39 |
neural cell | 1.31e-07 | 43 |
ectodermal cell | 1.92e-07 | 44 |
neurectodermal cell | 1.92e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 3.34e-11 | 29 |
regional part of telencephalon | 3.34e-11 | 29 |
telencephalon | 3.34e-11 | 29 |
cerebral cortex | 3.81e-10 | 21 |
cerebral hemisphere | 3.81e-10 | 21 |
pallium | 3.81e-10 | 21 |
gray matter | 1.35e-09 | 34 |
regional part of forebrain | 2.12e-08 | 39 |
forebrain | 2.12e-08 | 39 |
future forebrain | 2.12e-08 | 39 |
Ammon's horn | 3.21e-08 | 7 |
lobe parts of cerebral cortex | 3.21e-08 | 7 |
hippocampal formation | 3.21e-08 | 7 |
limbic system | 3.21e-08 | 7 |
limbic lobe | 3.21e-08 | 7 |
anterior neural tube | 3.39e-08 | 40 |
regional part of brain | 3.73e-07 | 46 |
brain | 5.25e-07 | 47 |
future brain | 5.25e-07 | 47 |
pre-chordal neural plate | 9.97e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.