Personal tools

MCL coexpression mm9:763: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=0.337254429386142,0.00578554627345711,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00117068505378301,0.00147163277134448,-0.00279919305937983,0.00331230436955447,0.0495440272509662,-0.00865934621344871,-0.00151630709080573,-0.00865934621344871,-0.00865934621344871,0.0159775670012368,0.000238004068008783,-0.00865934621344871,0.052118275618723,0.0631399830433945,0.0309664000382621,0.198845542237567,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.00218674047290153,0.00100458931803968,0.0523426886862667,0.065919413480479,0.127624285676448,0.013343466816788,0.0159404557065511,0.0078636668276454,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0471191125592477,0.705857221237757,0.437550371192306,0.404277186694891,0.378011523199613,0.267524173587834,0.028824550066455,-0.00865934621344871,0.00532253694477007,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.55911352063741,0.575675318067316,0.552873889246764,0.0553576645091831,0.0220406236030167,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.434389059383083,0.592820165767077,1.09952707357407,0.997523742472144,1.06033967955759,0.28233083927148,0.301586731122114,1.06271553728222,1.06540042266423,0.893447674241938,0.288702967749127,0.407430978288906,0.388588169138605,0.656141800287686,0.599774125399032,0.600655526859918,0.245172250984165,0.380632356158741,0.431172392130165,0.328938854082762,0.353495886736027,0.331212439496644,0.00474171042938196,0.112154065814997,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0121669882332209,-0.00865934621344871,-0.00865934621344871,0.0575470772147727,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.617753366444603,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0423092960365648,-0.00865934621344871,-0.00865934621344871,0.0134335201650594,0.0169923405231724,0.0167140932482696,0.018444410072386,0.0161131049078456,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.179591723334331,0.133916571735603,0.00231863840976707,0.00170644991926432,-0.00865934621344871,-0.00288701537798974,0.410042363344698,0.50436584842621,0.709169875450529,0.495135969717389,0.463295509674687,0.453480605673987,0.479857229108904,0.000286274389010867,0.00206262471518396,-0.00865934621344871,0.142862375493866,1.04341371413186,1.1994085737917,1.26805724075804,1.27035498603518,1.3857522929185,1.38549731691326,1.26612692637223,0.41786598357668,-0.00865934621344871,-0.000301501795344578,-0.000838316033991522,0.000904368656497467,0.0206109755799342,0.0168467619215246,0.0254809791947743,0.0334502347770593,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0095078809760842,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,8.27609232366719e-06,0.00431677450312142,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00489786427095343,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.472861854603491,0.700218087129936,-0.00865934621344871,-0.00865934621344871,0.0152082127800986,0.00141777927862838,0.0193207865318077,0.00907178865966738,0.00103015829488395,0.00689855101283338,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,9.65889399230152e-05,-6.43625022255558e-05,0.0222832829177398,-0.00865934621344871,-0.00865934621344871,0.0629889332055741,0.0988764851818308,0.146516753504968,0.0684214881290218,0.0677433111238695,0.014831243903201,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00304453253110464,-0.00865934621344871,-0.00865934621344871,0,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00118609988932701,-0.00865934621344871,-0.00865934621344871,-0.0015958236740012,-0.00865934621344871,-0.00152003386926364,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.250284828342977,0.269992289215462,-0.00865934621344871,0.00220372641544442,0.139662741107113,0.0654784857655017,0.072719681053004,0.0605873307383717,0.0903715683169466,0.0506719503722235,0.0447394839437228,0.114058655226233,0.104339548504873,0.494453875796066,-0.00225453308648008,-0.00865934621344871,-0.00137740172943188,-0.00129103648982194,-0.00865934621344871,0.00182892910492902,0.00408719782286553,-0.00865934621344871,0.00382632047317762,0.0042762266732345,0.00243270644676431,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.135646200124931,0.747350347404465,0.439882191436024,0.297051852996791,0.148203413377683,0.149364408046484,0.176143614860242,0.154103780394211,0.0200822991099047,-0.00865934621344871,0.0009570858540899,-0.00129451064691081,0.0153842410548349,0.0169409419325163,0.00711358466125961,0.0106619699963847,0.00368376116084916,0.252397707393532,0.036281085285235,0.000394720572144246,-0.000460497606796788,-0.000331444462540418,0.016474617703461,0.0226955798605818,-0.00108402898438762,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0116893556505538,0.0143200598684698,0.00123884351752562,0.00819957742780734,0.0156540992170327,-0.00865934621344871,-0.0048271832736116,-0.00865934621344871,-0.00277818616749798,-0.00865934621344871,0.137627725905059,0.0382710382801503,0.0559232515698162,0.0366178198997779,0.0546350594440607,0.0522638268065814,0.033752677872453,0.0273480778047219,0.000964430032994222,0.0400028317709621,0.150242722782477,-0.00865934621344871,0.0180627924884787,0.00901993700724801,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0022948324835962,-0.00201218858434383,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.000543745738399311,-0.00865934621344871,-0.00865934621344871,0.442730733003537,0.491129635604224,0.5177668829909,0.469409977073095,0.410216929517189,0.444872230326566,0.506126655127991,0.476074354175247,0.398818473554265,0.501506221463476,0.825274228512144,0.836503749225322,0.623097367244553,0.361079331329572,0.443655340374373,0.284051618427711,0.283089124309586,0.3266276651868,0.270743956535631,0.35418972106952,0.320385325459473,0.311215655097165,0.300605922866176,0.319157825037377,0.313204721776916,0.321674078598657,0.302782878657137,0.254817608691855,0.283104078928531,0.26262138448462,0.333169453829595,0.25081662835146,0.271008032377761,0.350568567005395,0.2872364009191,0.286630541253056,0.316251773592138,0.296814833537275,0.303606312869258,0.286937613073908,0.295742729611014,0.27526532479723,0.185808693206572,0.251830920676693,0.239277277379502,0.479799974955377,0.281950966698491,0.271566168359492,0.0607520627473561,0.066151107597357,0.0517939685191856
|coexpression_dpi_cluster_scores_mean=0.337254429386142,0.00578554627345711,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00117068505378301,0.00147163277134448,-0.00279919305937983,0.00331230436955447,0.0495440272509662,-0.00865934621344871,-0.00151630709080573,-0.00865934621344871,-0.00865934621344871,0.0159775670012368,0.000238004068008783,-0.00865934621344871,0.052118275618723,0.0631399830433945,0.0309664000382621,0.198845542237567,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.00218674047290153,0.00100458931803968,0.0523426886862667,0.065919413480479,0.127624285676448,0.013343466816788,0.0159404557065511,0.0078636668276454,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0471191125592477,0.705857221237757,0.437550371192306,0.404277186694891,0.378011523199613,0.267524173587834,0.028824550066455,-0.00865934621344871,0.00532253694477007,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.55911352063741,0.575675318067316,0.552873889246764,0.0553576645091831,0.0220406236030167,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.434389059383083,0.592820165767077,1.09952707357407,0.997523742472144,1.06033967955759,0.28233083927148,0.301586731122114,1.06271553728222,1.06540042266423,0.893447674241938,0.288702967749127,0.407430978288906,0.388588169138605,0.656141800287686,0.599774125399032,0.600655526859918,0.245172250984165,0.380632356158741,0.431172392130165,0.328938854082762,0.353495886736027,0.331212439496644,0.00474171042938196,0.112154065814997,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0121669882332209,-0.00865934621344871,-0.00865934621344871,0.0575470772147727,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.617753366444603,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0423092960365648,-0.00865934621344871,-0.00865934621344871,0.0134335201650594,0.0169923405231724,0.0167140932482696,0.018444410072386,0.0161131049078456,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.179591723334331,0.133916571735603,0.00231863840976707,0.00170644991926432,-0.00865934621344871,-0.00288701537798974,0.410042363344698,0.50436584842621,0.709169875450529,0.495135969717389,0.463295509674687,0.453480605673987,0.479857229108904,0.000286274389010867,0.00206262471518396,-0.00865934621344871,0.142862375493866,1.04341371413186,1.1994085737917,1.26805724075804,1.27035498603518,1.3857522929185,1.38549731691326,1.26612692637223,0.41786598357668,-0.00865934621344871,-0.000301501795344578,-0.000838316033991522,0.000904368656497467,0.0206109755799342,0.0168467619215246,0.0254809791947743,0.0334502347770593,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0095078809760842,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,8.27609232366719e-06,0.00431677450312142,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00489786427095343,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.472861854603491,0.700218087129936,-0.00865934621344871,-0.00865934621344871,0.0152082127800986,0.00141777927862838,0.0193207865318077,0.00907178865966738,0.00103015829488395,0.00689855101283338,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,9.65889399230152e-05,-6.43625022255558e-05,0.0222832829177398,-0.00865934621344871,-0.00865934621344871,0.0629889332055741,0.0988764851818308,0.146516753504968,0.0684214881290218,0.0677433111238695,0.014831243903201,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00304453253110464,-0.00865934621344871,-0.00865934621344871,0,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00118609988932701,-0.00865934621344871,-0.00865934621344871,-0.0015958236740012,-0.00865934621344871,-0.00152003386926364,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.250284828342977,0.269992289215462,-0.00865934621344871,0.00220372641544442,0.139662741107113,0.0654784857655017,0.072719681053004,0.0605873307383717,0.0903715683169466,0.0506719503722235,0.0447394839437228,0.114058655226233,0.104339548504873,0.494453875796066,-0.00225453308648008,-0.00865934621344871,-0.00137740172943188,-0.00129103648982194,-0.00865934621344871,0.00182892910492902,0.00408719782286553,-0.00865934621344871,0.00382632047317762,0.0042762266732345,0.00243270644676431,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.135646200124931,0.747350347404465,0.439882191436024,0.297051852996791,0.148203413377683,0.149364408046484,0.176143614860242,0.154103780394211,0.0200822991099047,-0.00865934621344871,0.0009570858540899,-0.00129451064691081,0.0153842410548349,0.0169409419325163,0.00711358466125961,0.0106619699963847,0.00368376116084916,0.252397707393532,0.036281085285235,0.000394720572144246,-0.000460497606796788,-0.000331444462540418,0.016474617703461,0.0226955798605818,-0.00108402898438762,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0116893556505538,0.0143200598684698,0.00123884351752562,0.00819957742780734,0.0156540992170327,-0.00865934621344871,-0.0048271832736116,-0.00865934621344871,-0.00277818616749798,-0.00865934621344871,0.137627725905059,0.0382710382801503,0.0559232515698162,0.0366178198997779,0.0546350594440607,0.0522638268065814,0.033752677872453,0.0273480778047219,0.000964430032994222,0.0400028317709621,0.150242722782477,-0.00865934621344871,0.0180627924884787,0.00901993700724801,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,0.0022948324835962,-0.00201218858434383,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.00865934621344871,-0.000543745738399311,-0.00865934621344871,-0.00865934621344871,0.442730733003537,0.491129635604224,0.5177668829909,0.469409977073095,0.410216929517189,0.444872230326566,0.506126655127991,0.476074354175247,0.398818473554265,0.501506221463476,0.825274228512144,0.836503749225322,0.623097367244553,0.361079331329572,0.443655340374373,0.284051618427711,0.283089124309586,0.3266276651868,0.270743956535631,0.35418972106952,0.320385325459473,0.311215655097165,0.300605922866176,0.319157825037377,0.313204721776916,0.321674078598657,0.302782878657137,0.254817608691855,0.283104078928531,0.26262138448462,0.333169453829595,0.25081662835146,0.271008032377761,0.350568567005395,0.2872364009191,0.286630541253056,0.316251773592138,0.296814833537275,0.303606312869258,0.286937613073908,0.295742729611014,0.27526532479723,0.185808693206572,0.251830920676693,0.239277277379502,0.479799974955377,0.281950966698491,0.271566168359492,0.0607520627473561,0.066151107597357,0.0517939685191856
|coexpression_dpi_cluster_scores_median=0.215001486450037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0682179984609265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729205553739347,0.321894675570492,0.249863259792521,0.393329702963699,0,0,0,0,0,0,0,0.257502384358885,0.412791885609234,0.213207239280454,0,0,0,0,0,0.531070089863674,0.404298764158439,1.30497664554703,1.06184675367501,1.16019224536528,0,0,1.06657560204623,1.02072173133221,0.813935265660789,0,0.214429664803005,0.208018178957679,0.619643252789235,0.54035029755627,0.667115995911391,0,0.193893011938994,0.282574418667431,0,0,0,0,0,0,0,0,0,0,0,0.0570741246689917,0,0,0,0.581707185865032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242778187668423,0.28216905172576,0.575695274021749,0.378505927175087,0.247272523425973,0.262724437924219,0.295225594521175,0,0,0,0.0829439327499637,0.890212095494932,1.25000145368481,1.2123282885898,1.21409885567883,1.32786705274199,1.32456751587284,1.26105143654779,0.360501935852296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212419302822567,0.565318781032302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293133511567635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54664817884369,0.335303042395549,0.316323758273961,0,0,0.0661577744756082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194445471641185,0.376754964798171,0.331587424856164,0.180573004668638,0.226621173458704,0.244374584202533,0.224020645200257,0.278900414858752,0.280187789078248,0.487285649470539,0.555660681115803,0.622441888716962,0.530234348211263,0.237875402198471,0.31134390827267,0.135986724295729,0.159715578577694,0.209006745960922,0.120876255993453,0.354777823948731,0.245620709720879,0.244154700692047,0.265471974098906,0.247556396095555,0.180962454233317,0.29061047861444,0.284898528886841,0.141706336142815,0.422974330955965,0.112067779638927,0.307198081843346,0.185379913858661,0.169342968499384,0.335010604487386,0.167478880586199,0.126604887871452,0.238475639215048,0.18359421108913,0.225056016595504,0.193442483447008,0.262556714121618,0.17392086126324,0.148982201447044,0.165781451382873,0.141704700595215,0.397742527884853,0.166685587652774,0.216063761676531,0,0,0
|gostat_on_MCL_coexpression=GO:0045665;negative regulation of neuron differentiation;0.000794495253785691;21907,15208!GO:0045664;regulation of neuron differentiation;0.000838742615128936;21907,15208!GO:0030182;neuron differentiation;0.000838742615128936;17755,21907,15208!GO:0048699;generation of neurons;0.00091378028845023;17755,21907,15208!GO:0022008;neurogenesis;0.00091378028845023;17755,21907,15208!GO:0048731;system development;0.00163346912530473;17755,14628,21907,15208!GO:0048869;cellular developmental process;0.00163346912530473;17755,14628,21907,15208!GO:0030154;cell differentiation;0.00163346912530473;17755,14628,21907,15208!GO:0048856;anatomical structure development;0.00235172011241831;17755,14628,21907,15208!GO:0045596;negative regulation of cell differentiation;0.00235172011241831;21907,15208!GO:0007399;nervous system development;0.00251666452717617;17755,21907,15208!GO:0045165;cell fate commitment;0.00251666452717617;21907,15208!GO:0007275;multicellular organismal development;0.00251666452717617;17755,14628,21907,15208!GO:0051093;negative regulation of developmental process;0.00251666452717617;21907,15208!GO:0021960;anterior commissure morphogenesis;0.00268814258843295;21907!GO:0045595;regulation of cell differentiation;0.00476361711834936;21907,15208!GO:0032502;developmental process;0.00537390981097135;17755,14628,21907,15208!GO:0007423;sensory organ development;0.00537390981097135;21907,15208!GO:0021988;olfactory lobe development;0.00537390981097135;21907!GO:0042668;auditory receptor cell fate determination;0.00537390981097135;15208!GO:0021772;olfactory bulb development;0.00537390981097135;21907!GO:0008347;glial cell migration;0.00537390981097135;21907!GO:0031175;neurite development;0.00537390981097135;17755,21907!GO:0048666;neuron development;0.00625326153862338;17755,21907!GO:0048468;cell development;0.00625326153862338;17755,21907,15208!GO:0060120;inner ear receptor cell fate commitment;0.00719801520321865;15208!GO:0009912;auditory receptor cell fate commitment;0.00719801520321865;15208!GO:0021952;central nervous system projection neuron axonogenesis;0.00719801520321865;21907!GO:0050793;regulation of developmental process;0.00721312630204343;21907,15208!GO:0032990;cell part morphogenesis;0.00721312630204343;17755,21907!GO:0048858;cell projection morphogenesis;0.00721312630204343;17755,21907!GO:0030030;cell projection organization and biogenesis;0.00721312630204343;17755,21907!GO:0048513;organ development;0.00801501860859627;14628,21907,15208!GO:0005519;cytoskeletal regulatory protein binding;0.00829752406539178;17755!GO:0021987;cerebral cortex development;0.00895532164740805;21907!GO:0035176;social behavior;0.00895532164740805;21907!GO:0001578;microtubule bundle formation;0.00915266077810837;17755!GO:0060041;retina development in camera-type eye;0.00915266077810837;21907!GO:0021955;central nervous system neuron axonogenesis;0.00915266077810837;21907!GO:0005829;cytosol;0.00915266077810837;17755,14628!GO:0032501;multicellular organismal process;0.00988022014933451;17755,14628,21907,15208!GO:0021543;pallium development;0.0131141185809079;21907!GO:0016439;tRNA-pseudouridine synthase activity;0.0131141185809079;21907!GO:0000902;cell morphogenesis;0.0150329301666908;17755,21907!GO:0032989;cellular structure morphogenesis;0.0150329301666908;17755,21907!GO:0009982;pseudouridine synthase activity;0.0157561972414516;21907!GO:0030316;osteoclast differentiation;0.0171315822530225;14628!GO:0021954;central nervous system neuron development;0.0176119602344722;21907!GO:0051705;behavioral interaction between organisms;0.0180725959911146;21907!GO:0042491;auditory receptor cell differentiation;0.0181516412460269;15208!GO:0021537;telencephalon development;0.0181516412460269;21907!GO:0021953;central nervous system neuron differentiation;0.0182245960741205;21907!GO:0001709;cell fate determination;0.0182245960741205;15208!GO:0060113;inner ear receptor cell differentiation;0.0201180295317525;15208!GO:0016866;intramolecular transferase activity;0.0212118888217189;21907!GO:0042490;mechanoreceptor differentiation;0.0236988425884903;15208!GO:0016358;dendrite development;0.0275027898001106;17755!GO:0002573;myeloid leukocyte differentiation;0.0277193658618234;14628!GO:0042063;gliogenesis;0.0279284885099959;21907!GO:0005496;steroid binding;0.0309506211559055;21907!GO:0003707;steroid hormone receptor activity;0.0309506211559055;21907!GO:0004879;ligand-dependent nuclear receptor activity;0.031096763193158;21907!GO:0048523;negative regulation of cellular process;0.0330922663318068;21907,15208!GO:0048519;negative regulation of biological process;0.037446062826476;21907,15208!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.039496706719972;17755!GO:0048839;inner ear development;0.0425239977973949;15208!GO:0048469;cell maturation;0.0441397823276559;15208!GO:0043010;camera-type eye development;0.0441397823276559;21907!GO:0043583;ear development;0.0441397823276559;15208!
|gostat_on_MCL_coexpression=GO:0045665;negative regulation of neuron differentiation;0.000794495253785691;21907,15208!GO:0045664;regulation of neuron differentiation;0.000838742615128936;21907,15208!GO:0030182;neuron differentiation;0.000838742615128936;17755,21907,15208!GO:0048699;generation of neurons;0.00091378028845023;17755,21907,15208!GO:0022008;neurogenesis;0.00091378028845023;17755,21907,15208!GO:0048731;system development;0.00163346912530473;17755,14628,21907,15208!GO:0048869;cellular developmental process;0.00163346912530473;17755,14628,21907,15208!GO:0030154;cell differentiation;0.00163346912530473;17755,14628,21907,15208!GO:0048856;anatomical structure development;0.00235172011241831;17755,14628,21907,15208!GO:0045596;negative regulation of cell differentiation;0.00235172011241831;21907,15208!GO:0007399;nervous system development;0.00251666452717617;17755,21907,15208!GO:0045165;cell fate commitment;0.00251666452717617;21907,15208!GO:0007275;multicellular organismal development;0.00251666452717617;17755,14628,21907,15208!GO:0051093;negative regulation of developmental process;0.00251666452717617;21907,15208!GO:0021960;anterior commissure morphogenesis;0.00268814258843295;21907!GO:0045595;regulation of cell differentiation;0.00476361711834936;21907,15208!GO:0032502;developmental process;0.00537390981097135;17755,14628,21907,15208!GO:0007423;sensory organ development;0.00537390981097135;21907,15208!GO:0021988;olfactory lobe development;0.00537390981097135;21907!GO:0042668;auditory receptor cell fate determination;0.00537390981097135;15208!GO:0021772;olfactory bulb development;0.00537390981097135;21907!GO:0008347;glial cell migration;0.00537390981097135;21907!GO:0031175;neurite development;0.00537390981097135;17755,21907!GO:0048666;neuron development;0.00625326153862338;17755,21907!GO:0048468;cell development;0.00625326153862338;17755,21907,15208!GO:0060120;inner ear receptor cell fate commitment;0.00719801520321865;15208!GO:0009912;auditory receptor cell fate commitment;0.00719801520321865;15208!GO:0021952;central nervous system projection neuron axonogenesis;0.00719801520321865;21907!GO:0050793;regulation of developmental process;0.00721312630204343;21907,15208!GO:0032990;cell part morphogenesis;0.00721312630204343;17755,21907!GO:0048858;cell projection morphogenesis;0.00721312630204343;17755,21907!GO:0030030;cell projection organization and biogenesis;0.00721312630204343;17755,21907!GO:0048513;organ development;0.00801501860859627;14628,21907,15208!GO:0005519;cytoskeletal regulatory protein binding;0.00829752406539178;17755!GO:0021987;cerebral cortex development;0.00895532164740805;21907!GO:0035176;social behavior;0.00895532164740805;21907!GO:0001578;microtubule bundle formation;0.00915266077810837;17755!GO:0060041;retina development in camera-type eye;0.00915266077810837;21907!GO:0021955;central nervous system neuron axonogenesis;0.00915266077810837;21907!GO:0005829;cytosol;0.00915266077810837;17755,14628!GO:0032501;multicellular organismal process;0.00988022014933451;17755,14628,21907,15208!GO:0021543;pallium development;0.0131141185809079;21907!GO:0016439;tRNA-pseudouridine synthase activity;0.0131141185809079;21907!GO:0000902;cell morphogenesis;0.0150329301666908;17755,21907!GO:0032989;cellular structure morphogenesis;0.0150329301666908;17755,21907!GO:0009982;pseudouridine synthase activity;0.0157561972414516;21907!GO:0030316;osteoclast differentiation;0.0171315822530225;14628!GO:0021954;central nervous system neuron development;0.0176119602344722;21907!GO:0051705;behavioral interaction between organisms;0.0180725959911146;21907!GO:0042491;auditory receptor cell differentiation;0.0181516412460269;15208!GO:0021537;telencephalon development;0.0181516412460269;21907!GO:0021953;central nervous system neuron differentiation;0.0182245960741205;21907!GO:0001709;cell fate determination;0.0182245960741205;15208!GO:0060113;inner ear receptor cell differentiation;0.0201180295317525;15208!GO:0016866;intramolecular transferase activity;0.0212118888217189;21907!GO:0042490;mechanoreceptor differentiation;0.0236988425884903;15208!GO:0016358;dendrite development;0.0275027898001106;17755!GO:0002573;myeloid leukocyte differentiation;0.0277193658618234;14628!GO:0042063;gliogenesis;0.0279284885099959;21907!GO:0005496;steroid binding;0.0309506211559055;21907!GO:0003707;steroid hormone receptor activity;0.0309506211559055;21907!GO:0004879;ligand-dependent nuclear receptor activity;0.031096763193158;21907!GO:0048523;negative regulation of cellular process;0.0330922663318068;21907,15208!GO:0048519;negative regulation of biological process;0.037446062826476;21907,15208!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.039496706719972;17755!GO:0048839;inner ear development;0.0425239977973949;15208!GO:0048469;cell maturation;0.0441397823276559;15208!GO:0043010;camera-type eye development;0.0441397823276559;21907!GO:0043583;ear development;0.0441397823276559;15208!
}}
}}

Revision as of 12:46, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr10:42303385..42303401,-p1@Nr2e1
Mm9::chr10:42303410..42303422,-p3@Nr2e1
Mm9::chr10:42303434..42303445,-p4@Nr2e1
Mm9::chr10:42303452..42303470,-p2@Nr2e1
Mm9::chr10:42303593..42303617,+p3@Ostm1
Mm9::chr13:100214377..100214396,-p5@Mtap1b
Mm9::chr13:100214398..100214443,-p4@Mtap1b
Mm9::chr15:30387382..30387465,+p@chr15:30387382..30387465
+
Mm9::chr4:154335024..154335039,+p1@Hes5


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0045665negative regulation of neuron differentiation0.000794495253785691
GO:0045664regulation of neuron differentiation0.000838742615128936
GO:0030182neuron differentiation0.000838742615128936
GO:0048699generation of neurons0.00091378028845023
GO:0022008neurogenesis0.00091378028845023
GO:0048731system development0.00163346912530473
GO:0048869cellular developmental process0.00163346912530473
GO:0030154cell differentiation0.00163346912530473
GO:0048856anatomical structure development0.00235172011241831
GO:0045596negative regulation of cell differentiation0.00235172011241831
GO:0007399nervous system development0.00251666452717617
GO:0045165cell fate commitment0.00251666452717617
GO:0007275multicellular organismal development0.00251666452717617
GO:0051093negative regulation of developmental process0.00251666452717617
GO:0021960anterior commissure morphogenesis0.00268814258843295
GO:0045595regulation of cell differentiation0.00476361711834936
GO:0032502developmental process0.00537390981097135
GO:0007423sensory organ development0.00537390981097135
GO:0021988olfactory lobe development0.00537390981097135
GO:0042668auditory receptor cell fate determination0.00537390981097135
GO:0021772olfactory bulb development0.00537390981097135
GO:0008347glial cell migration0.00537390981097135
GO:0031175neurite development0.00537390981097135
GO:0048666neuron development0.00625326153862338
GO:0048468cell development0.00625326153862338
GO:0060120inner ear receptor cell fate commitment0.00719801520321865
GO:0009912auditory receptor cell fate commitment0.00719801520321865
GO:0021952central nervous system projection neuron axonogenesis0.00719801520321865
GO:0050793regulation of developmental process0.00721312630204343
GO:0032990cell part morphogenesis0.00721312630204343
GO:0048858cell projection morphogenesis0.00721312630204343
GO:0030030cell projection organization and biogenesis0.00721312630204343
GO:0048513organ development0.00801501860859627
GO:0005519cytoskeletal regulatory protein binding0.00829752406539178
GO:0021987cerebral cortex development0.00895532164740805
GO:0035176social behavior0.00895532164740805
GO:0001578microtubule bundle formation0.00915266077810837
GO:0060041retina development in camera-type eye0.00915266077810837
GO:0021955central nervous system neuron axonogenesis0.00915266077810837
GO:0005829cytosol0.00915266077810837
GO:0032501multicellular organismal process0.00988022014933451
GO:0021543pallium development0.0131141185809079
GO:0016439tRNA-pseudouridine synthase activity0.0131141185809079
GO:0000902cell morphogenesis0.0150329301666908
GO:0032989cellular structure morphogenesis0.0150329301666908
GO:0009982pseudouridine synthase activity0.0157561972414516
GO:0030316osteoclast differentiation0.0171315822530225
GO:0021954central nervous system neuron development0.0176119602344722
GO:0051705behavioral interaction between organisms0.0180725959911146
GO:0042491auditory receptor cell differentiation0.0181516412460269
GO:0021537telencephalon development0.0181516412460269
GO:0021953central nervous system neuron differentiation0.0182245960741205
GO:0001709cell fate determination0.0182245960741205
GO:0060113inner ear receptor cell differentiation0.0201180295317525
GO:0016866intramolecular transferase activity0.0212118888217189
GO:0042490mechanoreceptor differentiation0.0236988425884903
GO:0016358dendrite development0.0275027898001106
GO:0002573myeloid leukocyte differentiation0.0277193658618234
GO:0042063gliogenesis0.0279284885099959
GO:0005496steroid binding0.0309506211559055
GO:0003707steroid hormone receptor activity0.0309506211559055
GO:0004879ligand-dependent nuclear receptor activity0.031096763193158
GO:0048523negative regulation of cellular process0.0330922663318068
GO:0048519negative regulation of biological process0.037446062826476
GO:0000226microtubule cytoskeleton organization and biogenesis0.039496706719972
GO:0048839inner ear development0.0425239977973949
GO:0048469cell maturation0.0441397823276559
GO:0043010camera-type eye development0.0441397823276559
GO:0043583ear development0.0441397823276559



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:763&oldid=2150049"