Personal tools

MCL coexpression mm9:414: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=0.143826289748374,-0.112829520325305,-0.123873234938206,-0.171534838013865,-0.173689757758793,0.268394804429822,0.276511306393565,-0.298461702045667,-0.291311854433827,-0.311090797375538,-0.308709126228057,-0.325843241472568,-0.220331589903534,-0.246691299818847,-0.282697916077698,-0.277594297527347,-0.330540102799693,-0.297602497641537,-0.283716892458848,-0.284521004423479,0.409580355516469,-0.220220258920696,-0.214408173581646,0.0813246290652772,0.0651399467824709,-0.0232783802176045,0.0638619880361059,0.0753496136662028,0.119867394660212,0.110364412051543,0.110265829730778,-0.226749856026548,-0.275441255940955,-0.302371440309936,-0.0135282341145359,0.0393456401699721,0.0442233546690594,-0.328740477603896,-0.345714377124441,-0.343630694811508,-0.355177955418472,-0.335711780910673,-0.320503180349196,-0.12555246369017,-0.122100162298133,-0.188341427560454,-0.0610375183926892,0.0327061075022923,0.0533825509396146,0.0902486070727079,-0.044267479532389,-0.0138867553656669,-0.352130273881661,-0.235278073734153,-0.205521290781775,-0.208926622424322,-0.173498287749279,-0.159073809455839,0.425088787559153,0.422461304948655,0.447962383617582,-0.161240103986468,-0.165615119448601,-0.162116373028407,-0.10560830137104,-0.165830551354458,-0.0377027883914531,0.0732352029660904,0.25060584649703,0.258993460483099,0.254836029617211,0.646185365065835,0.645267415562646,0.307411581272415,0.270107294431021,0.371687925200952,0.963035196220365,0.909479846702003,0.897984348501641,0.494224472657025,0.478713247382712,0.475497130584583,0.815095773287937,0.857978723461683,0.86780551608767,0.67046153964333,0.642477638490622,0.517000198886344,-0.121671696342483,-0.0732819317461873,0.0866904380294649,-0.0648501146274443,-0.229317456755258,-0.194075476256883,-0.200557324435435,-0.216663210451309,0.237194818408996,-0.268468151370109,-0.280369950554163,-0.275415929183813,0.118970282017749,-0.366720467016687,-0.300866966456534,-0.24730036669318,-0.142456458099288,-0.161687657816571,-0.106047852495739,0.188307084176851,-0.128690386064108,0.218317000865846,0.0560022734057378,0.0541996737709737,0.0319590536914133,0.0834828619716933,0.0871066465162244,0.0732443208464824,-0.149066092692555,-0.0673331717737667,-0.140260780771332,-0.0556607131944015,-0.139552006325998,-0.148108081122366,0.243604107203965,0.618695725978786,0.640129494166548,0.354240128847376,-0.260560733797747,-0.244388386124774,-0.254484639806866,0.865754354669446,0.937319487939541,0.518725246565945,0.962544730996551,0.980342776226568,0.89663015686876,0.914612189862439,-0.035770424277911,-0.00460394366082141,0.213570213111819,0.233712033794952,-0.0168023293233084,0.0531702114841616,0.0655546218826717,0.0529810041944632,0.0867831366796188,0.116101137742321,0.143377926987636,0.274051745075006,-0.221583162777454,-0.109776647221834,-0.0752283185339501,0.0140957658168322,0.0153606318485461,0.0149168586262036,-0.00474375802910101,-0.0216538258807839,-0.255610374878157,-0.279324992005811,-0.215181285390578,-0.0897129849169804,-0.0803611077766539,-0.0881956253613457,-0.0458792473902681,-0.100508135152302,-0.112884079553581,-0.142496725105069,-0.149621423554661,-0.135623702771071,-0.109174436676107,-0.116424202845582,-0.102833264619958,-0.0762371727305313,-0.102776998533882,-0.0650126574694417,0.92593317447539,0.521543862316333,0.292825233370284,0.0928383667885593,-0.0619724611928753,-0.0481534418025514,0.107074672035962,0.138086644218153,0.139556630574084,0.177755349982719,0.197579273188866,0.137401309377227,0.192623054249674,0.198202709704782,0.259572403082623,0.233574776458111,0.165543742544778,0.250746147874503,-0.0677384682181956,-0.0280622331140625,-0.116174794415648,-0.0689978178318824,-0.0578442105436643,-0.022041523437315,-0.00514598143296199,-0.0146612567761602,-0.0510148511127709,-0.0221454957102937,-0.091882125775743,-0.244951162800661,-0.210636459948614,-0.261411362146524,-0.256607346087639,-0.223578918457453,-0.179665608873215,-0.152382617392057,-0.189388390631235,-0.203571241210088,-0.271664740914472,-0.0922794859513683,-0.12415977513867,-0.141909250693398,-0.151445936198818,-0.18623027569235,0.0606343935966347,-0.033764716866762,-0.0140795569469104,0.016233132616853,0.00886754165485431,0.034367538555183,0.0710970072958497,0.110726470887043,0.0164843780315592,0.0153673714078915,0.0526558684184844,0.0471613648988901,0.0625852382813056,0.0640983980428877,-0.218917069430368,-0.28734216062468,0.224315442136261,0.115836999809568,0.777347045253571,0.757510980175582,-0.279800414805761,-0.0139723553267293,0.0141859891105387,0.0444206167598517,0.124275531598408,0.00831882845126552,0.0305397306417773,0.0251707957817379,0.0411045549576245,0.111196875785539,0.0988614624838769,0.782505441358034,-0.00202875906414876,0.0442893505829793,0.0397983707472108,-0.00730938863016707,1.13457690638934,0.260930014942827,0.443538756359152,0.744327660559733,0.866028952851851,0.829320131450533,0.673380080335954,0.74776630134151,0.754254163113066,0.948742801078559,1.09886401041426,1.08426056103236,0.693322687119346,0.0702115334220023,0.0616454348981287,0.156702326495363,0.231819555721878,0.336135343076034,0.375736362979371,0.443678843712687,-0.128388193566421,-0.0648762221043485,0.514046181979092,-0.0861917505243565,-0.140297662885505,-0.105476113556438,-0.124827703744136,-0.10718870454548,0.241200886136993,0.767964775770305,-0.164269479384898,0.104828281417606,-0.109678718080755,-0.247601645873799,-0.26272758437059,-0.281796098989865,-0.099179738907507,-0.093472748076011,-0.112344385971484,0.494760531073725,-0.0237337215265551,0.239946475900165,0.190328780427751,0.173681569238877,0.273325475696995,0.307351074414686,0.367340806433029,0.439784851187046,0.106314533604306,0.468751949205388,-0.241209416478088,-0.0781744705125756,-0.12230576456152,-0.0765880442148301,-0.0941685260526481,-0.0785713000159745,-0.135878977564914,-0.0999478892790529,-0.0790045471275857,-0.214681642897729,-0.185343853198241,-0.113411020646863,-0.109496670559445,-0.127892188199094,-0.165016196515809,-0.123400474740602,-0.14425409929811,-0.169278528736287,-0.168509176762507,-0.164334536819074,-0.156630833102709,-0.164474878944804,-0.113954067646095,-0.134330820141772,-0.111995756404276,0.123531516498511,-0.236952016571106,-0.313553402516522,-0.282530778369117,0.117096141707314,0.0220072218440638,-0.0480866028550475,-0.0678647544566657,0.392221940469453,0.936811451909295,0.954820110700002,0.92715952767738,0.887264764010149,0.960862183544701,0.990303081739523,0.974417365651594,0.958240657507336,0.995106847652096,0.959012834754625,-0.0996396066627794,0.0871919836432362,0.152775546915648,0.119338709631525,0.0587405530573958,0.106295650919207,0.212698432414801,0.179188687357455,0.234393294730477,0.219564760564937,0.214703701237972,0.196852068405578,0.192928039926601,0.20412733911783,0.181004163749265,0.182933906931728,0.197015962538961,0.186156756642171,0.166883275263486,0.198466533459009,0.163475178523014,0.162204845215768,0.153883107558633,0.180251797365548,0.183615327441293,0.209526022859981,0.204923303307033,0.168316126512824,0.207954005053383,0.155533929471621,0.212611327548415,0.194059846267139,0.195199967173969,0.188737475312915,0.167133455969595,0.363521111939922,0.171681066443615,0.187255646416991,0.0781068836497074,0.113725170378825,0.101599499359928
|coexpression_dpi_cluster_scores_mean=0.143826289748374,-0.112829520325305,-0.123873234938206,-0.171534838013865,-0.173689757758793,0.268394804429822,0.276511306393565,-0.298461702045667,-0.291311854433827,-0.311090797375538,-0.308709126228057,-0.325843241472568,-0.220331589903534,-0.246691299818847,-0.282697916077698,-0.277594297527347,-0.330540102799693,-0.297602497641537,-0.283716892458848,-0.284521004423479,0.409580355516469,-0.220220258920696,-0.214408173581646,0.0813246290652772,0.0651399467824709,-0.0232783802176045,0.0638619880361059,0.0753496136662028,0.119867394660212,0.110364412051543,0.110265829730778,-0.226749856026548,-0.275441255940955,-0.302371440309936,-0.0135282341145359,0.0393456401699721,0.0442233546690594,-0.328740477603896,-0.345714377124441,-0.343630694811508,-0.355177955418472,-0.335711780910673,-0.320503180349196,-0.12555246369017,-0.122100162298133,-0.188341427560454,-0.0610375183926892,0.0327061075022923,0.0533825509396146,0.0902486070727079,-0.044267479532389,-0.0138867553656669,-0.352130273881661,-0.235278073734153,-0.205521290781775,-0.208926622424322,-0.173498287749279,-0.159073809455839,0.425088787559153,0.422461304948655,0.447962383617582,-0.161240103986468,-0.165615119448601,-0.162116373028407,-0.10560830137104,-0.165830551354458,-0.0377027883914531,0.0732352029660904,0.25060584649703,0.258993460483099,0.254836029617211,0.646185365065835,0.645267415562646,0.307411581272415,0.270107294431021,0.371687925200952,0.963035196220365,0.909479846702003,0.897984348501641,0.494224472657025,0.478713247382712,0.475497130584583,0.815095773287937,0.857978723461683,0.86780551608767,0.67046153964333,0.642477638490622,0.517000198886344,-0.121671696342483,-0.0732819317461873,0.0866904380294649,-0.0648501146274443,-0.229317456755258,-0.194075476256883,-0.200557324435435,-0.216663210451309,0.237194818408996,-0.268468151370109,-0.280369950554163,-0.275415929183813,0.118970282017749,-0.366720467016687,-0.300866966456534,-0.24730036669318,-0.142456458099288,-0.161687657816571,-0.106047852495739,0.188307084176851,-0.128690386064108,0.218317000865846,0.0560022734057378,0.0541996737709737,0.0319590536914133,0.0834828619716933,0.0871066465162244,0.0732443208464824,-0.149066092692555,-0.0673331717737667,-0.140260780771332,-0.0556607131944015,-0.139552006325998,-0.148108081122366,0.243604107203965,0.618695725978786,0.640129494166548,0.354240128847376,-0.260560733797747,-0.244388386124774,-0.254484639806866,0.865754354669446,0.937319487939541,0.518725246565945,0.962544730996551,0.980342776226568,0.89663015686876,0.914612189862439,-0.035770424277911,-0.00460394366082141,0.213570213111819,0.233712033794952,-0.0168023293233084,0.0531702114841616,0.0655546218826717,0.0529810041944632,0.0867831366796188,0.116101137742321,0.143377926987636,0.274051745075006,-0.221583162777454,-0.109776647221834,-0.0752283185339501,0.0140957658168322,0.0153606318485461,0.0149168586262036,-0.00474375802910101,-0.0216538258807839,-0.255610374878157,-0.279324992005811,-0.215181285390578,-0.0897129849169804,-0.0803611077766539,-0.0881956253613457,-0.0458792473902681,-0.100508135152302,-0.112884079553581,-0.142496725105069,-0.149621423554661,-0.135623702771071,-0.109174436676107,-0.116424202845582,-0.102833264619958,-0.0762371727305313,-0.102776998533882,-0.0650126574694417,0.92593317447539,0.521543862316333,0.292825233370284,0.0928383667885593,-0.0619724611928753,-0.0481534418025514,0.107074672035962,0.138086644218153,0.139556630574084,0.177755349982719,0.197579273188866,0.137401309377227,0.192623054249674,0.198202709704782,0.259572403082623,0.233574776458111,0.165543742544778,0.250746147874503,-0.0677384682181956,-0.0280622331140625,-0.116174794415648,-0.0689978178318824,-0.0578442105436643,-0.022041523437315,-0.00514598143296199,-0.0146612567761602,-0.0510148511127709,-0.0221454957102937,-0.091882125775743,-0.244951162800661,-0.210636459948614,-0.261411362146524,-0.256607346087639,-0.223578918457453,-0.179665608873215,-0.152382617392057,-0.189388390631235,-0.203571241210088,-0.271664740914472,-0.0922794859513683,-0.12415977513867,-0.141909250693398,-0.151445936198818,-0.18623027569235,0.0606343935966347,-0.033764716866762,-0.0140795569469104,0.016233132616853,0.00886754165485431,0.034367538555183,0.0710970072958497,0.110726470887043,0.0164843780315592,0.0153673714078915,0.0526558684184844,0.0471613648988901,0.0625852382813056,0.0640983980428877,-0.218917069430368,-0.28734216062468,0.224315442136261,0.115836999809568,0.777347045253571,0.757510980175582,-0.279800414805761,-0.0139723553267293,0.0141859891105387,0.0444206167598517,0.124275531598408,0.00831882845126552,0.0305397306417773,0.0251707957817379,0.0411045549576245,0.111196875785539,0.0988614624838769,0.782505441358034,-0.00202875906414876,0.0442893505829793,0.0397983707472108,-0.00730938863016707,1.13457690638934,0.260930014942827,0.443538756359152,0.744327660559733,0.866028952851851,0.829320131450533,0.673380080335954,0.74776630134151,0.754254163113066,0.948742801078559,1.09886401041426,1.08426056103236,0.693322687119346,0.0702115334220023,0.0616454348981287,0.156702326495363,0.231819555721878,0.336135343076034,0.375736362979371,0.443678843712687,-0.128388193566421,-0.0648762221043485,0.514046181979092,-0.0861917505243565,-0.140297662885505,-0.105476113556438,-0.124827703744136,-0.10718870454548,0.241200886136993,0.767964775770305,-0.164269479384898,0.104828281417606,-0.109678718080755,-0.247601645873799,-0.26272758437059,-0.281796098989865,-0.099179738907507,-0.093472748076011,-0.112344385971484,0.494760531073725,-0.0237337215265551,0.239946475900165,0.190328780427751,0.173681569238877,0.273325475696995,0.307351074414686,0.367340806433029,0.439784851187046,0.106314533604306,0.468751949205388,-0.241209416478088,-0.0781744705125756,-0.12230576456152,-0.0765880442148301,-0.0941685260526481,-0.0785713000159745,-0.135878977564914,-0.0999478892790529,-0.0790045471275857,-0.214681642897729,-0.185343853198241,-0.113411020646863,-0.109496670559445,-0.127892188199094,-0.165016196515809,-0.123400474740602,-0.14425409929811,-0.169278528736287,-0.168509176762507,-0.164334536819074,-0.156630833102709,-0.164474878944804,-0.113954067646095,-0.134330820141772,-0.111995756404276,0.123531516498511,-0.236952016571106,-0.313553402516522,-0.282530778369117,0.117096141707314,0.0220072218440638,-0.0480866028550475,-0.0678647544566657,0.392221940469453,0.936811451909295,0.954820110700002,0.92715952767738,0.887264764010149,0.960862183544701,0.990303081739523,0.974417365651594,0.958240657507336,0.995106847652096,0.959012834754625,-0.0996396066627794,0.0871919836432362,0.152775546915648,0.119338709631525,0.0587405530573958,0.106295650919207,0.212698432414801,0.179188687357455,0.234393294730477,0.219564760564937,0.214703701237972,0.196852068405578,0.192928039926601,0.20412733911783,0.181004163749265,0.182933906931728,0.197015962538961,0.186156756642171,0.166883275263486,0.198466533459009,0.163475178523014,0.162204845215768,0.153883107558633,0.180251797365548,0.183615327441293,0.209526022859981,0.204923303307033,0.168316126512824,0.207954005053383,0.155533929471621,0.212611327548415,0.194059846267139,0.195199967173969,0.188737475312915,0.167133455969595,0.363521111939922,0.171681066443615,0.187255646416991,0.0781068836497074,0.113725170378825,0.101599499359928
|coexpression_dpi_cluster_scores_median=0.17258889376807,-0.0361328807910345,-0.0210530801306855,-0.134260126021073,-0.056171820572638,0.0426514040627695,0.023142529291498,-0.271027709801768,-0.212157769593551,-0.245659253554008,-0.247818199554066,-0.260032106463849,-0.11533484890251,-0.13663851155669,-0.253164099224205,-0.274842485938969,-0.275291504805478,-0.190571756521668,-0.183488094042537,-0.157025814525669,0.285126498943944,-0.125666400554256,-0.114339581748997,-0.0441758146689467,-0.0211071459787532,-0.0429225206349393,0,-0.00472380249371995,-0.029763705299152,-0.0645429236702556,0,-0.199746303009759,-0.212484870114361,-0.274500353796573,-0.000200551631775791,-0.00346915747953846,0,-0.406930221414687,-0.361652861610191,-0.373255604951996,-0.442268022855445,-0.403455998153472,-0.368936827994258,-0.0528583288756856,-0.0514992832270497,-0.113151464606762,-0.0138032463749234,0.0494214812871744,0.128015443871951,0.0899009035652567,0.0126301841246536,0,-0.286152069720024,-0.0921167741403575,-0.0719914756915288,-0.108036662209059,-0.129310867418994,-0.116027421537637,0.273215940381733,0.310327955892069,0.316804605833974,-0.125720014618434,-0.0898381312661607,-0.0719914756915288,-0.0318522059698901,-0.13663851155669,0.025999198199841,0.123207851867017,0.112801638129547,0.136640395453549,0.128339103382832,0.547053922467011,0.594851301077614,0.155026788098925,0.135776878933976,0.211133010456831,0.930837880245112,0.836922403600104,0.844554157480733,0.423046726887319,0.412358780490903,0.32794873412384,0.749042422135863,0.769617158264493,0.745429231791992,0.49572322762351,0.544838231044644,0.442072906118811,-0.0942784821776375,-0.0306546606864555,-0.00539944823205395,-0.0793108155174237,-0.274383369166872,-0.119595324657221,-0.194814827323668,-0.205408502553519,0.213046483074703,-0.276434889930756,-0.24674114712553,-0.234860949313852,0.125071794994193,-0.381129753383321,-0.249738298522215,-0.18512927996649,-0.15779982321994,-0.168078268594405,-0.0555838108122085,0.104171883426912,-0.0787230696500593,0.163767710650692,0.0302088793607199,0.0139754208956657,0.0164539754857917,0.075892433837297,0.0385962953546421,-0.00850376704065415,-0.139280870755182,-0.0550179777486152,-0.13663851155669,-0.0546611375620016,-0.13663851155669,-0.117331173297649,0,0.56972421651177,0.585889506058403,0.1542429888705,-0.280767641132464,-0.174242760019053,-0.223217932520249,0.793727862054747,0.808613449956658,0.369718317581885,0.82253336901762,0.898763430243747,0.797053040548412,0.801109380666589,-0.0470997439712073,0.000143551111698504,0.195711314378858,0.155857702750397,-0.0292630036199234,0.0271977361983954,0.025643397865826,0.0387302278013363,0.0381212494650727,0.0896959894914093,0.0980079017655084,0.230901785182708,-0.195021018636472,-0.0266283073567918,-0.00714075911332015,0.0592677115713106,0.0463932975794909,0.0509790194443456,0.0261936117007867,-0.0168432284254291,-0.187512667807954,-0.204993701181374,-0.13663851155669,-0.103781987921133,-0.10578592011912,-0.0813671605121065,-0.0496937834507724,-0.0802202373377771,-0.10612284144934,-0.139200050842263,-0.159500782779882,-0.136892010452892,-0.0718624752764911,-0.122727387106374,-0.0756445950668677,-0.0685261010482383,-0.0719914756915288,-0.0228164476297656,0.782771837184582,0.421665574897935,0.188723088042622,-0.00300290127138802,-0.0670202380430509,-0.0550146666300279,0.0739699627387513,0.0225749111541293,-0.0110825887704157,0.0118832595408982,0.0491802273898376,-0.0188129081008402,0.0366968408978409,0.0334768371464,0.088244301112973,0.124564836759269,0.0257275770739818,0.0822302177096069,-0.0106316865541102,-0.00256825294556972,-0.0321896991643809,-0.0486262360267136,-0.0125017921155448,-0.00927389506921975,0.0149983109089541,0.0070911948814446,-0.0288193672857561,0.0113582765785591,-0.0719914756915288,-0.251875133517902,-0.191887772785405,-0.270247560239007,-0.251563020846839,-0.179494455247291,-0.159034245373285,-0.132606443425606,-0.106577103987795,-0.162525266381945,-0.20808360844834,-0.0845169153378642,-0.116226596323803,-0.116979375920114,-0.103049638478637,-0.210147564052177,-0.0158196551188907,-0.0259950880668903,-0.0496544103478773,-0.0131344813944953,0.0251716854470243,-0.0158196551188907,0.0169168640245577,0.0774164737207147,-0.0138574669101964,-0.0008441529258387,0.037769154198383,0.00870468724360485,0.00888954394319265,0.0274154247510143,-0.171573582383765,-0.195700788864695,0.171516864360523,0.0680680997384332,0.694948486213607,0.661439829522404,-0.202332953725653,-0.00385097011435697,-0.006433958538718,-0.024956836571394,0.0702126588189473,-0.00649952004931965,0.043027554792193,0.0189064953728347,0.00974789891616655,0.0263689708750158,0.0415096641517213,0.668835928904963,-0.00113770993599871,-0.0128274612401402,-0.021275971425798,0.026266240620136,1.20290010252603,0.100964242196998,0.308459119823886,0.711728744486188,0.662332323833343,0.666238617667833,0.500164637783705,0.563833226241187,0.535720605419006,0.821172655218351,1.06227583438226,1.01218412433773,0.592867933403225,0.00684796348905081,0.0423092456224378,0.124869583803663,0.115817161812821,0.209367126883801,0.295301280459314,0.335091492628448,-0.126953222820898,-0.0713798059866619,0.425046091062503,-0.0316499035442885,-0.112802181754715,-0.040256019067044,-0.0656603226205024,-0.0902733125736964,0.0963207240572342,0.714856727664872,-0.0778247300535635,0.046213246721797,-0.0602126776295769,-0.201724233294455,-0.2842515013386,-0.248474945683231,-0.0674330325195151,-0.042783300516887,-0.0720611330652167,0.19386690183339,-0.0387751784351971,0.188839432183172,0.135542079361755,0.0278172019376344,0.102412540951192,0.0955089091083884,0.147719524547258,0.15790971290889,0.00734660372545435,0.376126603296835,-0.205794671735091,-0.0692647410960538,-0.0665802703176007,-0.0753599632840208,-0.0681350708739192,-0.0373972197352744,-0.160597624714522,-0.0542058262649407,-0.0346921682064685,-0.233650221725848,-0.242293138693773,-0.0991834039376783,-0.079220570572697,-0.0862728041471374,-0.114607112591475,-0.0824754587909883,-0.119850604238471,-0.0969337193931999,-0.101159378345838,-0.0958518863596372,-0.0805414209114534,-0.0852522443383147,-0.0957413080714586,-0.0834403908741553,-0.0725962826902313,0.152135379392652,-0.214205322947901,-0.324182786053774,-0.241651457903183,0.0664293119509611,0.00420509071544794,-0.00381430100172498,-0.0259136959162491,0.331508566796777,0.794965155190001,0.846435973375173,0.818677937048868,0.619131103596207,0.792299346882205,0.875222678872215,0.841874278284136,0.781804018883501,0.896198911848369,0.800059436887611,-0.119889932029017,-0.0141048564619826,0.0598013393751742,0.005643118798881,-0.0303743646856507,0.0440234179729727,0.112157498222397,0.0823108451731735,0.143260436313755,0.0960884090935221,0.1173665013744,0.098409521798252,0.101982934996576,0.109106821957523,0.0974825712831244,0.0656037479366749,0.102645922948916,0.0766073954291401,0.0468627787875759,0.129584308671724,0.0643536868065541,0.0751305011104599,0.0313625987892548,0.0639272371774624,0.0627081221192079,0.12174827950238,0.114415072717997,0.0552010018771336,0.1000128173887,0.0553939463103879,0.104368550108546,0.0984743466726336,0.11994941867271,0.0436091861276156,0.0769206628232492,0.264147943442185,0.0805940928714401,0.0894604435567442,0.0272009483278974,0.0784633217306043,0.0401800641056655
|gostat_on_MCL_coexpression=GO:0007264;small GTPase mediated signal transduction;0.0153087698988386;328778,76932,227624,215821!
|gostat_on_MCL_coexpression=GO:0007264;small GTPase mediated signal transduction;0.0153087698988386;328778,76932,227624,215821!
}}
}}

Revision as of 12:41, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr10:18463497..18463566,-p1@D10Bwg1379e
Mm9::chr11:115229001..115229048,-p1@C630004H02Rik
Mm9::chr12:117724187..117724257,+p1@Ptprn2
Mm9::chr12:117724272..117724291,+p2@Ptprn2
Mm9::chr13:55050749..55050842,+p1@Unc5a
Mm9::chr13:56855175..56855215,-p@chr13:56855175..56855215
-
Mm9::chr16:10543121..10543189,-p1@Dexi
Mm9::chr16:23890891..23890947,-p1@Sst
Mm9::chr17:24670654..24670677,-p1@Rab26
Mm9::chr17:25377057..25377103,-p1@Gnptg
p1@LOC100047632
p1@LOC100505011
Mm9::chr2:25463967..25464006,-p1@B230208H17Rik
Mm9::chr5:52862773..52862828,-p1@Ccdc149
Mm9::chr5:72049152..72049192,-p1@Gabra4
Mm9::chr5:72049197..72049228,-p2@Gabra4
Mm9::chr6:8728106..8728162,-p1@Ica1
Mm9::chr7:112788831..112788884,-p1@Arfip2
Mm9::chr9:121905080..121905159,-p1@C85492
Mm9::chrX:147778750..147778783,+p1@Fam120c


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0007264small GTPase mediated signal transduction0.0153087698988386



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:414&oldid=2149700"