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MacroAPE 1083:CNhs10731 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;320.6581486132089;234.08408697054256;168.9567187176979;77.30138015224537!2;127.73671604194939;18.009668418172904;347.65339706929336;307.6005...")
 
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2!10827-111C8;0.0461358!10789-110H6;0.971755!10828-111C9;0.750799!10788-110H5;0.851577!10792-110H9;0.107516!10765-110E9;0.301202!10829-111D1;0.263598!10830-111D2;0.321265!10831-111D3;0.169737!10832-111D4;0.459028!10833-111D5;0.14722!10764-110E8;0.123814!10770-110F5;0.0407304!10399-106A3;0.283198!10400-106A4;0.0407505!10405-106A9;0.0443444!10834-111D6;0.0341205!10835-111D7;0.0755094!10836-111D8;0.489408!10837-111D9;0.841467!10699-109G6;0.571705!10802-111A1;0.637492!10796-110I4;0.709227!10010-101C1;0.270912!10810-111A9;0.240932!10421-106C7;0.159948!10708-109H6;0.536898!12235-129G3;0.0974831!12236-129G4;0.578248!12237-129G5;0.8716!10167-103B5;0.792214!10151-102I7;0.457982!10428-106D5;0.418671!10795-110I3;0.469825!10805-111A4;0.514155!10052-101G7;0.0102751!10189-103D9;0.0907065!10589-108D4;0.000803651!10425-106D2;0.201936!10427-106D4;0.489328!10702-109G9;0.603473!10432-106D9;0.481359!10496-107C1;0.376455!10718-109I7;0.23943!10011-101C2;0.191758!10053-101G8;0.0185342!10686-109F2;0.200552!10084-102B3;0.221466!10012-101C3;0.544202!10085-102B4;0.374207!10482-107A5;0.9241!10419-106C5;0.0101476!10080-102A8;0.0748719!10760-110E4;0.236375!10709-109H7;0.15409!10710-109H8;0.418599!10703-109H1;0.00856506!10719-109I8;0.0727328!10642-109A3;0.0760624!10177-103C6;0.0497812!10164-103B2;0.349287!10173-103C2;0.469297!10166-103B4;0.725145!10083-102B2;0.758209!10188-103D8;0.71505!10552-107I3;0.199493!10553-107I4;0.0182596!10013-101C4;0.800308!10536-107G5;0.0999605!10618-108G6;0.699742!10423-106C9;0.258527!10785-110H2;0.644821!12238-129G6;0.38338!12239-129G7;0.21909!12240-129G8;0.325461!10416-106C2;0.202535!10801-110I9;0.436363!10766-110F1;0.82918!10824-111C5;0.726626!10825-111C6;0.296102!10826-111C7;0.258625!10454-106G4;0.454231!10409-106B4;0.285045!10638-108I8;0.839622!10636-108I6;0.050211!10513-107D9;0.151122!10420-106C6;0.190478!10082-102B1;0.0775744!10014-101C5;0.0303724!10070-101I7;0.0822396!10452-106G2;0.00130227!10453-106G3;0.0910255!10449-106F8;0.103806!10042-101F6;0.102177!10069-101I6;0.36182!10193-103E4;0.0264447!10631-108I1;0.312977!10438-106E6;0.362786!10488-107B2;0.12418!10196-103E7;0.457324!10071-101I8;0.234424!10071-101I8;0.00951226!10041-101F5;0.764675!10451-106G1;0.327214!10450-106F9;0.0401358!10604-108F1;0.0335309!10605-108F2;0.0923923!10606-108F3;0.0117292!10603-108E9;0.0226591!10497-107C2;0.0503741!10448-106F7;0.215198!10643-109A4;0.258457!10426-106D3;0.114677!10431-106D8;0.476447!10197-103E8;0.259653!10443-106F2;0.0220468!10815-111B5;0.0373604!10816-111B6;0.0310874!10817-111B7;0.0195423!10015-101C6;0.0191729!10410-106B5;0.0426873!10054-101G9;0.311785!10758-110E2;0.0451926!10711-109H9;0.280014!10040-101F4;0.156974!10470-106I2;0.398422!10415-106C1;0.0931387!10198-103E9;0.899947!10614-108G2;0.092883!10612-108F9;0.844684!10549-107H9;0.114086!10615-108G3;0.115672!10487-107B1;0.0537476!10433-106E1;0.144999!10688-109F4;0.000840996!10444-106F3;0.263162!10444-106F3;0.0836047!10485-107A8;0.0605951!10413-106B8;0.140877!10175-103C4;0.907854!10161-103A8;0.505499!12131-128D7;0.500532!10624-108H3;0.933297!10712-109I1;0.546928!10205-103F7;0.881294!10206-103F8;0.114226!10207-103F9;0.269241!10050-101G5;0.272895!10051-101G6;0.744399!10016-101C7;0.817156!10046-101G1;0.304756!10778-110G4;0.276776!10633-108I3;0.0829084!10818-111B8;0.215026!10819-111B9;0.158544!10820-111C1;0.143161!10484-107A7;0.145752!10808-111A7;0.0122754!10169-103B7;0.867395!10153-102I9;0.432253!13425-144D5;0.452184!13433-144E4;0.131008!13437-144E8;0.174634!11904-125F5;0.238569!11905-125F6;0.245378!10039-101F3;0.112328!10791-110H8;0.391808!10017-101C8;0.11426!10045-101F9;0.318043!10509-107D5;0.318483!10839-111E2;0.261802!10692-109F8;0.00860465!10079-102A7;0.584285!10078-102A6;0.217525!10721-110A1;0.96858!10569-108B2;0.193954!10570-108B3;0.852293!10571-108B4;0.431882!10647-109A8;0.300867!10752-110D5;0.232699!10782-110G8;0.82054!10726-110A6;0.782988!10018-101C9;0.081935!10086-102B5;0.40671!10182-103D2;0.0876045!10165-103B3;0.417914!10499-107C4;0.411749!10408-106B3;0.130682!10019-101D1;0.110482!10068-101I5;0.0518065!10075-102A3;0.0184843!10077-102A5;0.0471736!10727-110A7;0.0142886!10775-110G1;0.799841!10412-106B7;0.680382!12231-129F8;0.76168!12232-129F9;0.922233!12233-129G1;0.734213!12234-129G2;0.971654!10414-106B9;0.864744!10170-103B8;0.0404628!10183-103D3;0.398384!10150-102I6;0.389349!10174-103C3;0.403346!10155-103A2;0.303966!10038-101F2;0.315192!10838-111E1;0.247256!10759-110E3;0.0290648!10514-107E1;0.0929893!10465-106H6;0.0298764!10691-109F7;0.00588832!10843-111E6;0.67965!10844-111E7;0.164758!11747-123G1;0.226397!11748-123G2;0.0718836!11749-123G3;0.257506!11750-123G4;0.375339!11751-123G5;0.301056!11840-124H4;0.395018!11752-123G6;0.233706!11753-123G7;0.0696093!11754-123G8;0.453762!11755-123G9;0.0117248!11756-123H1;0.272092!11833-124G6;0.117062!11760-123H5;0.181155!11836-124G9;0.0346084!11758-123H3;0.0130381!11835-124G8;0.0693857!11762-123H7;0.118278!11838-124H2;0.187977!11757-123H2;0.503451!11759-123H4;0.156097!11761-123H6;0.159079!11842-124H6;0.304041!11837-124H1;0.197453!10568-108B1;0.0711709!13230-141I8;0.768241!13231-141I9;0.121079!10696-109G3;0.129611!10493-107B7;0.449442!10494-107B8;0.0307376!10850-111F4;0.0512413!10851-111F5;0.102242!10852-111F6;0.365377!10853-111F7;0.40709!10854-111F8;0.00652254!10855-111F9;0.700688!10856-111G1;0.177433!10847-111F1;0.069272!10846-111E9;0.103895!10848-111F2;0.0486791!10845-111E8;0.00280041!10857-111G2;0.00277542!10858-111G3;0.289229!10156-103A3;0.150073!11901-125F2;0.385874!11902-125F3;0.508101!11903-125F4;0.423962!10689-109F5;0.431218!10648-109A9;0.451942!10784-110H1;0.509307!10744-110C6;0.123916!10772-110F7;0.972415!10474-106I6;0.0818735!10600-108E6;0.767279!10684-109E9;0.336475!12226-129F3;0.30918!12227-129F4;0.957187!10508-107D4;0.294448!10539-107G8;0.0953299!10607-108F4;0.0884489!10555-107I6;0.0730105!10774-110F9;0.297246!10637-108I7;0.0854109!10663-109C6;0.289599!10728-110A8;0.682177!10729-110A9;0.364706!10430-106D7;0.0647464!10730-110B1;0.286953!10813-111B3;0.525616!10812-111B2;0.835573!10037-101F1;0.325609!10172-103C1;0.29271!10163-103B1;0.493139!10076-102A4;0.478868!10073-102A1;0.436043!10036-101E9;0.899342!10195-103E6;0.466083!10277-104E7;0.412964!10434-106E2;0.361566!10550-107I1;0.394895!10545-107H5;0.137362!10544-107H4;0.962591!10704-109H2;0.215638!10510-107D6;0.841823!10558-107I9;0.565722!10020-101D2;0.141285!10732-110B3;0.140687!10049-101G4;0.292195!10698-109G5;0.0758002!10437-106E5;0.617626!10417-106C3;0.0214286!10035-101E8;0.413184!10171-103B9;0.409531!10157-103A4;0.435672!10034-101E7;0.386956!10072-101I9;0.443593!10199-103F1;0.945669!10200-103F2;0.021918!10697-109G4;0.0825469!10723-110A3;0.483338!10179-103C8;0.718214!10160-103A7;0.556209!10180-103C9;0.892873!10162-103A9;0.284365!10021-101D3;0.45897!10840-111E3;0.100806!10706-109H4;0.796859!10033-101E6;0.395374!10032-101E5;0.500038!10490-107B4;0.489483!10439-106E7;0.00535338!10022-101D4;0.0418728!10176-103C5;0.0453361!10469-106I1;0.422827!10067-101I4;0.075377!10411-106B6;0.0371946!10471-106I3;0.0294733!10030-101E3;0.0790057!10475-106I7;0.329951!10787-110H4;0.0384308!10477-106I9;0.142478!10695-109G2;0.288454!11771-123I7;0.323235!11772-123I8;0.736918!11773-123I9;0.550895!10093-102C3;0.998793!10442-106F1;0.0776971!10442-106F1;0.273954!10201-103F3;0.368841!10639-108I9;0.0337734!11843-124H7;0.715959!11841-124H5;0.0872743!10693-109F9;0.135348!10436-106E4;0.0247704!10483-107A6;0.204704!10282-104F3;0.018458!10023-101D5;0.503025!10066-101I3;0.265253!10065-101I2;0.00548519!10800-110I8;0.0115734!10610-108F7;0.293484!10841-111E4;0.0934144!10541-107H1;0.174573!10842-111E5;0.16988!10562-108A4;0.0619997!10024-101D6;0.0832664!10064-101I1;0.0629277!10609-108F6;0.00723939!10048-101G3;0.153898!10781-110G7;0.0823703!10181-103D1;0.392783!10159-103A6;0.218668!10056-101H2;0.268266!10737-110B8;0.11257!10025-101D7;0.103667!10044-101F8;0.188769!10424-106D1;0.122993!10463-106H4;0.390168!10616-108G4;0.614608!10486-107A9;0.916979!10062-101H8;0.136079!10202-103F4;0.05815!10158-103A5;0.0101988!10441-106E9;0.359657!10031-101E4;0.0148396!10063-101H9;0.444425!10063-101H9;0.894092!11763-123H8;0.000834298!11765-123I1;0.537625!11768-123I4;0.571998!10807-111A6;0.289645!10790-110H7;0.339243!10798-110I6;0.158442!10786-110H3;0.00126833!10591-108D6;0.672266!10593-108D8;0.281153!10590-108D5;0.78253!10026-101D8;0.415224!10096-102C6;0.390563!10168-103B6;0.447177!10154-103A1;0.424289!10209-103G2;0.352406!10061-101H7;0.0180069!10027-101D9;0.00729836!10043-101F7;0.680009!10783-110G9;0.0427253!10028-101E1;0.560588!10060-101H6;0.376563!10203-103F5;0.00729222!10059-101H5;0.043624!10047-101G2;0.00872707!10029-101E2;0.0222481!10058-101H4;0.0403305!10418-106C4;0.0138098!10492-107B6;0.026843!10694-109G1;0.139058!10797-110I5;0.171595!10057-101H3;0.369908!10100-102D1;0.0191983!10055-101H1;0.165415!10204-103F6;0.115366!10191-103E2;0.15472!10563-108A5;0.027796
|name=CNhs10731_bl_f2
|name=CNhs10731_bl_f2
|tomtom_result=RUNX1#MA0002.2;2;0.000348936;0.166094;0.330608;9;AGGTGGTTG;GTCTGTGGTTT;+!ZNF354C#MA0130.1;-2;0.00149528;0.711752;0.54536;6;AGGTGGTTG;GTGGAT;-!MET32#MA0334.1;-1;0.00250668;1.19318;0.54536;7;AGGTGGTTG;TGTGGCG;-!RUNX1#MA0002.2;2;0.00278748;1.32684;0.54536;9;AGGTGGTTG;TATTGTGGTTA;+!YPR022C#MA0436.1;-1;0.00317831;1.51288;0.54536;7;AGGTGGTTG;CGTGGGG;-!RREB1#MA0073.1;3;0.00402572;1.91624;0.54536;9;AGGTGGTTG;TGGGGGGGGGTGGTTTGGGG;-!En1#MA0027.1;0;0.00402915;1.91788;0.54536;9;AGGTGGTTG;AAGTAGTGCCC;+!MET31#MA0333.1;1;0.00632124;3.00891;0.564282;8;AGGTGGTTG;GGTGTGGCG;+!YGR067C#MA0425.1;5;0.0063735;3.03379;0.564282;9;AGGTGGTTG;TGAAAAAGTGGGGT;-!MET28#MA0332.1;0;0.00687025;3.27024;0.564282;6;AGGTGGTTG;CTGTGG;+!YML081W#MA0431.1;0;0.00724089;3.44666;0.564282;9;AGGTGGTTG;GTGCGGGGT;-!ADR1#MA0268.1;-2;0.00751593;3.57758;0.564282;7;AGGTGGTTG;GTGGGGT;-!Macho-1#MA0118.1;0;0.00774233;3.68535;0.564282;9;AGGTGGTTG;TGGGGGGTC;+!MIG1#MA0337.1;-2;0.00857583;4.08209;0.580384;7;AGGTGGTTG;GCGGGGG;-!CRZ1#MA0285.1;-2;0.0100599;4.78853;0.635436;7;AGGTGGTTG;GTGGCTTAG;-!MET4#MA0335.1;2;0.0149407;7.11178;0.829352;6;AGGTGGTTG;AACTGTGG;+!Pax4#MA0068.1;3;0.0153527;7.30786;0.829352;9;AGGTGGTTG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!SWI5#MA0402.1;0;0.0168422;8.01688;0.829352;8;AGGTGGTTG;TGCTGGTT;+!Tal1::Gata1#MA0140.1;-2;0.0182565;8.69008;0.829352;7;AGGTGGTTG;CTGGTGGGGACAGATAAG;+!TAL1::TCF3#MA0091.1;3;0.0201822;9.60673;0.829352;9;AGGTGGTTG;AACAGATGGTCG;-
}}
}}

Latest revision as of 12:17, 7 September 2012

Full Name: CNhs10731_bl_f2

Motif matrix
POACGT
1320.6581486132089234.08408697054256168.956718717697977.30138015224537
2127.7367160419493918.009668418172904347.65339706929336307.6005529242789
312.830821504283062172.76665106514233603.474265461514711.92859642275352
41.11677631404873661.11677631404873661.1167763140487366797.6500055115472
50.00.0800.54083034277220.4595041109212655
616.4082759180192512.080821757231723754.804430532636517.706806245806067
769.7274987645132100.91694380225574276.3500672444968354.0058246424287
8140.1638777818940398.09450925394489196.9156904049452365.82625701291033
9134.1445845515800770.2422883389625386.73606523602126209.877396327131

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RUNX1#MA0002.220.0003489360.1660940.3306089AGGTGGTTGGTCTGTGGTTT+
ZNF354C#MA0130.1-20.001495280.7117520.545366AGGTGGTTGGTGGAT-
MET32#MA0334.1-10.002506681.193180.545367AGGTGGTTGTGTGGCG-
RUNX1#MA0002.220.002787481.326840.545369AGGTGGTTGTATTGTGGTTA+
YPR022C#MA0436.1-10.003178311.512880.545367AGGTGGTTGCGTGGGG-
RREB1#MA0073.130.004025721.916240.545369AGGTGGTTGTGGGGGGGGGTGGTTTGGGG-
En1#MA0027.100.004029151.917880.545369AGGTGGTTGAAGTAGTGCCC+
MET31#MA0333.110.006321243.008910.5642828AGGTGGTTGGGTGTGGCG+
YGR067C#MA0425.150.00637353.033790.5642829AGGTGGTTGTGAAAAAGTGGGGT-
MET28#MA0332.100.006870253.270240.5642826AGGTGGTTGCTGTGG+
YML081W#MA0431.100.007240893.446660.5642829AGGTGGTTGGTGCGGGGT-
ADR1#MA0268.1-20.007515933.577580.5642827AGGTGGTTGGTGGGGT-
Macho-1#MA0118.100.007742333.685350.5642829AGGTGGTTGTGGGGGGTC+
MIG1#MA0337.1-20.008575834.082090.5803847AGGTGGTTGGCGGGGG-
CRZ1#MA0285.1-20.01005994.788530.6354367AGGTGGTTGGTGGCTTAG-
MET4#MA0335.120.01494077.111780.8293526AGGTGGTTGAACTGTGG+
Pax4#MA0068.130.01535277.307860.8293529AGGTGGTTGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
SWI5#MA0402.100.01684228.016880.8293528AGGTGGTTGTGCTGGTT+
Tal1::Gata1#MA0140.1-20.01825658.690080.8293527AGGTGGTTGCTGGTGGGGACAGATAAG+
TAL1::TCF3#MA0091.130.02018229.606730.8293529AGGTGGTTGAACAGATGGTCG-
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