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MacroAPE 1083:CNhs13099 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;238.27001707321034;117.12282551632421;76.96577307531973;4.480545548306159!2;276.09453105346137;36.14931784254333;81.06817140381378;43.527140...")
 
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10827-111C8;0.268153!10789-110H6;0.132633!10828-111C9;0.42503!10788-110H5;0.0656452!10792-110H9;0.17927!10765-110E9;0.356751!10829-111D1;0.454385!10830-111D2;0.265677!10831-111D3;0.404454!10832-111D4;0.131897!10833-111D5;0.490196!10764-110E8;0.524861!10770-110F5;0.484894!10399-106A3;0.917466!10400-106A4;0.216875!10405-106A9;0.188615!10834-111D6;0.191557!10835-111D7;0.605245!10836-111D8;0.0659369!10837-111D9;0.276046!10699-109G6;0.303064!10802-111A1;0.486785!10796-110I4;0.319671!10010-101C1;0.0296776!10810-111A9;0.330384!10421-106C7;0.109981!10708-109H6;0.614608!12235-129G3;0.0673122!12236-129G4;0.930782!12237-129G5;0.304714!10167-103B5;0.460489!10151-102I7;0.145745!10428-106D5;0.214175!10795-110I3;0.17363!10805-111A4;0.525613!10052-101G7;0.0950419!10189-103D9;0.217495!10589-108D4;0.429286!10425-106D2;0.0349978!10427-106D4;0.400438!10702-109G9;0.657216!10432-106D9;0.404536!10496-107C1;0.036062!10718-109I7;0.242371!10011-101C2;0.571151!10053-101G8;0.0920149!10686-109F2;0.188213!10084-102B3;0.724922!10012-101C3;0.157546!10085-102B4;0.0661624!10482-107A5;0.53897!10419-106C5;0.00800446!10080-102A8;0.043902!10760-110E4;0.569484!10709-109H7;0.161939!10710-109H8;0.0913614!10703-109H1;0.301252!10719-109I8;0.124872!10642-109A3;0.163114!10177-103C6;0.431591!10164-103B2;0.263011!10173-103C2;0.199712!10166-103B4;0.409463!10083-102B2;0.308011!10188-103D8;0.305964!10552-107I3;0.104181!10553-107I4;0.609357!10013-101C4;0.0500815!10536-107G5;0.229108!10618-108G6;0.0611611!10423-106C9;0.18171!10785-110H2;0.187664!12238-129G6;0.145251!12239-129G7;0.340394!12240-129G8;0.237001!10416-106C2;0.57033!10801-110I9;0.721694!10766-110F1;0.264387!10824-111C5;0.318434!10825-111C6;0.0479669!10826-111C7;0.0411784!10454-106G4;0.0488655!10409-106B4;0.156511!10638-108I8;0.274931!10636-108I6;0.0193978!10513-107D9;0.0478139!10420-106C6;0.219798!10082-102B1;0.356518!10014-101C5;0.489635!10070-101I7;0.137964!10452-106G2;0.207472!10453-106G3;0.604547!10449-106F8;0.762389!10042-101F6;0.744269!10069-101I6;0.280883!10193-103E4;0.404768!10631-108I1;0.19833!10438-106E6;0.594482!10488-107B2;0.168156!10196-103E7;0.0300943!10071-101I8;0.239224!10071-101I8;0.199467!10041-101F5;0.365078!10451-106G1;0.0079182!10450-106F9;0.212986!10604-108F1;0.155809!10605-108F2;0.153225!10606-108F3;0.0455706!10603-108E9;0.104903!10497-107C2;0.158283!10448-106F7;0.218931!10643-109A4;0.0740929!10426-106D3;0.0252025!10431-106D8;0.051592!10197-103E8;0.071675!10443-106F2;0.141274!10815-111B5;0.0479272!10816-111B6;0.514374!10817-111B7;0.496456!10015-101C6;0.511013!10410-106B5;0.345421!10054-101G9;0.301346!10758-110E2;0.111924!10711-109H9;0.100786!10040-101F4;0.25329!10470-106I2;0.160241!10415-106C1;0.029633!10198-103E9;0.00467648!10614-108G2;0.114477!10612-108F9;0.491438!10549-107H9;0.100837!10615-108G3;0.189679!10487-107B1;0.128474!10433-106E1;0.100113!10688-109F4;0.0370835!10444-106F3;0.0773365!10444-106F3;0.0836403!10485-107A8;0.0513031!10413-106B8;0.338062!10175-103C4;0.012813!10161-103A8;0.214379!12131-128D7;0.275515!10624-108H3;0.526951!10712-109I1;0.697054!10205-103F7;0.414893!10206-103F8;0.199203!10207-103F9;0.468013!10050-101G5;0.928845!10051-101G6;0.716733!10016-101C7;0.421627!10046-101G1;0.284579!10778-110G4;0.454019!10633-108I3;0.300504!10818-111B8;0.334589!10819-111B9;0.134437!10820-111C1;0.146909!10484-107A7;0.136393!10808-111A7;0.0967444!10169-103B7;0.761746!10153-102I9;0.170523!13425-144D5;0.204968!13433-144E4;0.774557!13437-144E8;0.856998!11904-125F5;0.72963!11905-125F6;0.781421!10039-101F3;0.85715!10791-110H8;0.160516!10017-101C8;0.29599!10045-101F9;0.147985!10509-107D5;0.424233!10839-111E2;0.132473!10692-109F8;0.607236!10079-102A7;0.0323086!10078-102A6;0.230799!10721-110A1;0.339877!10569-108B2;0.282711!10570-108B3;0.352119!10571-108B4;0.229084!10647-109A8;0.291829!10752-110D5;0.0310991!10782-110G8;0.25823!10726-110A6;0.956853!10018-101C9;0.287629!10086-102B5;0.0296828!10182-103D2;0.000203693!10165-103B3;0.237114!10499-107C4;0.200027!10408-106B3;0.209824!10019-101D1;0.0687621!10068-101I5;0.216195!10075-102A3;0.950382!10077-102A5;0.767855!10727-110A7;0.121206!10775-110G1;0.701186!10412-106B7;0.485352!12231-129F8;0.385299!12232-129F9;0.331011!12233-129G1;0.368126!12234-129G2;0.217841!10414-106B9;0.464299!10170-103B8;0.267825!10183-103D3;0.155668!10150-102I6;0.101699!10174-103C3;0.159635!10155-103A2;0.190585!10038-101F2;0.228206!10838-111E1;0.154284!10759-110E3;0.160067!10514-107E1;0.118438!10465-106H6;0.302914!10691-109F7;0.173417!10843-111E6;0.142069!10844-111E7;0.120535!11747-123G1;0.164957!11748-123G2;0.416973!11749-123G3;0.363917!11750-123G4;0.372438!11751-123G5;0.59237!11840-124H4;0.638795!11752-123G6;0.176987!11753-123G7;0.293925!11754-123G8;0.112977!11755-123G9;0.0859262!11756-123H1;0.0463142!11833-124G6;0.88183!11760-123H5;0.499195!11836-124G9;0.45952!11758-123H3;0.0232304!11835-124G8;0.616823!11762-123H7;0.500573!11838-124H2;0.403078!11757-123H2;0.471685!11759-123H4;0.623965!11761-123H6;0.237916!11842-124H6;0.677456!11837-124H1;0.401581!10568-108B1;0.490051!13230-141I8;0.244083!13231-141I9;0.0435026!10696-109G3;0.0801045!10493-107B7;0.329735!10494-107B8;0.0619018!10850-111F4;0.181721!10851-111F5;0.0256097!10852-111F6;0.375084!10853-111F7;0.0358616!10854-111F8;0.1693!10855-111F9;0.0133243!10856-111G1;0.654889!10847-111F1;0.26183!10846-111E9;0.0328339!10848-111F2;0.145983!10845-111E8;0.135603!10857-111G2;0.00741831!10858-111G3;0.18223!10156-103A3;0.069858!11901-125F2;0.17845!11902-125F3;0.633627!11903-125F4;0.832632!10689-109F5;0.799192!10648-109A9;0.0339888!10784-110H1;0.73741!10744-110C6;0.0414559!10772-110F7;0.314146!10474-106I6;0.431056!10600-108E6;0.564414!10684-109E9;0.121944!12226-129F3;0.819421!12227-129F4;0.0711928!10508-107D4;0.24595!10539-107G8;0.904513!10607-108F4;0.554694!10555-107I6;0.208048!10774-110F9;0.622297!10637-108I7;0.22277!10663-109C6;0.123387!10728-110A8;0.970609!10729-110A9;0.235224!10430-106D7;0.237227!10730-110B1;0.515959!10813-111B3;0.418403!10812-111B2;0.0689671!10037-101F1;0.37183!10172-103C1;0.187077!10163-103B1;0.178284!10076-102A4;0.177584!10073-102A1;0.123724!10036-101E9;0.552641!10195-103E6;0.135251!10277-104E7;0.188348!10434-106E2;0.875286!10550-107I1;0.0806127!10545-107H5;0.0352709!10544-107H4;0.261993!10704-109H2;0.156576!10510-107D6;0.761187!10558-107I9;0.0952327!10020-101D2;0.060806!10732-110B3;0.174991!10049-101G4;0.0451854!10698-109G5;0.0746279!10437-106E5;0.115954!10417-106C3;0.245983!10035-101E8;0.00130217!10171-103B9;0.164065!10157-103A4;0.154586!10034-101E7;0.194659!10072-101I9;0.17297!10199-103F1;0.535019!10200-103F2;0.979034!10697-109G4;0.445237!10723-110A3;0.219606!10179-103C8;0.0855993!10160-103A7;0.171624!10180-103C9;0.201917!10162-103A9;0.0451783!10021-101D3;0.0596672!10840-111E3;0.473682!10706-109H4;0.701631!10033-101E6;0.486897!10032-101E5;0.175865!10490-107B4;0.162647!10439-106E7;0.075713!10022-101D4;0.0194508!10176-103C5;0.267994!10469-106I1;0.188312!10067-101I4;0.0476841!10411-106B6;0.381499!10471-106I3;0.0532156!10030-101E3;0.156585!10475-106I7;0.135859!10787-110H4;0.274442!10477-106I9;0.1003!10695-109G2;0.144998!11771-123I7;0.0630496!11772-123I8;0.115902!11773-123I9;0.385991!10093-102C3;0.185209!10442-106F1;0.989699!10442-106F1;0.116067!10201-103F3;0.0679729!10639-108I9;0.167374!11843-124H7;0.0444311!11841-124H5;0.250101!10693-109F9;0.20638!10436-106E4;0.189478!10483-107A6;0.202059!10282-104F3;0.292013!10023-101D5;0.74087!10066-101I3;0.728607!10065-101I2;0.381296!10800-110I8;0.517072!10610-108F7;0.211465!10841-111E4;0.0403305!10541-107H1;0.263697!10842-111E5;0.327931!10562-108A4;0.518624!10024-101D6;0.369923!10064-101I1;0.100717!10609-108F6;0.173327!10048-101G3;0.39718!10781-110G7;0.222035!10181-103D1;0.419426!10159-103A6;0.18709!10056-101H2;0.178402!10737-110B8;0.288002!10025-101D7;0.70594!10044-101F8;0.169307!10424-106D1;0.340709!10463-106H4;0.507185!10616-108G4;0.130548!10486-107A9;0.0185552!10062-101H8;0.145244!10202-103F4;0.217078!10158-103A5;0.934158!10441-106E9;0.366241!10031-101E4;0.152374!10063-101H9;0.137211!10063-101H9;0.473833!11763-123H8;0.135563!11765-123I1;0.0763519!11768-123I4;0.102686!10807-111A6;0.1633!10790-110H7;0.322226!10798-110I6;0.894397!10786-110H3;0.323829!10591-108D6;0.372754!10593-108D8;0.10243!10590-108D5;0.0371368!10026-101D8;0.163606!10096-102C6;0.0966642!10168-103B6;0.612199!10154-103A1;0.192976!10209-103G2;0.259839!10061-101H7;0.561601!10027-101D9;0.542018!10043-101F7;0.964163!10783-110G9;0.720132!10028-101E1;0.061338!10060-101H6;0.905558!10203-103F5;0.697467!10059-101H5;0.47539!10047-101G2;0.700313!10029-101E2;0.499589!10058-101H4;0.614313!10418-106C4;0.450598!10492-107B6;0.00225848!10694-109G1;0.0244668!10797-110I5;0.680618!10057-101H3;0.055391!10100-102D1;0.345339!10055-101H1;0.38879!10204-103F6;0.391313!10191-103E2;0.811164!10563-108A5;0.228441
|name=CNhs13099_bl_f0
|name=CNhs13099_bl_f0
|tomtom_result=ovo#MA0126.1;-1;0.00105527;0.502306;0.502306;9;AAGAAGCAGTG;AGTAACAGT;+!prd#MA0239.1;-1;0.00105527;0.502306;0.502306;9;AAGAAGCAGTG;AGTAACAGT;+!PEND#MA0127.1;0;0.00194987;0.928138;0.618758;10;AAGAAGCAGTG;AATAAGAAGT;-!SOK2#MA0385.1;-1;0.0064806;3.08477;1;10;AAGAAGCAGTG;ACCTGCAGGCA;+!Foxd3#MA0041.1;1;0.00771116;3.67051;1;11;AAGAAGCAGTG;AAACAAACATTC;-!PHD1#MA0355.1;-1;0.00912435;4.34319;1;10;AAGAAGCAGTG;ACCTGCAGCA;+!Foxq1#MA0040.1;0;0.0111672;5.3156;1;11;AAGAAGCAGTG;AATAAACAATA;-!odd#MA0454.1;2;0.0117713;5.60314;1;9;AAGAAGCAGTG;AACAGTAGCAG;+!Myf#MA0055.1;0;0.0138574;6.59613;1;11;AAGAAGCAGTG;CAGCAGCTGCTG;+
}}
}}

Latest revision as of 14:29, 7 September 2012

Full Name: CNhs13099_bl_f0

Motif matrix
POACGT
1238.27001707321034117.1228255163242176.965773075319734.480545548306159
2276.0945310534613736.1493178425433381.0681714038137843.52714091334205
398.5328018623549985.84959852954121173.6344281594813678.82233266178302
4191.43268480223625111.938624136590425.829041302933288127.63881097140052
5370.260791005618962.54442730523328465.88700242320357758.146940479104465
6146.635367315015970.4422850381654344283.055486779263566.706022080715314
719.472456986136496412.754666789723963.82730485737310260.7847325799269156
8425.292543227848972.6370842904180621.11294318657409577.796590508319064
98.087340114952291.532698442606722424.171956180420243.047166475180839
1088.9413118381008936.867482302709884.40832883979115226.62203823255865
11123.54298475646951109.19042205527737178.0619750700661526.043779331347494

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ovo#MA0126.1-10.001055270.5023060.5023069AAGAAGCAGTGAGTAACAGT+
prd#MA0239.1-10.001055270.5023060.5023069AAGAAGCAGTGAGTAACAGT+
PEND#MA0127.100.001949870.9281380.61875810AAGAAGCAGTGAATAAGAAGT-
SOK2#MA0385.1-10.00648063.08477110AAGAAGCAGTGACCTGCAGGCA+
Foxd3#MA0041.110.007711163.67051111AAGAAGCAGTGAAACAAACATTC-
PHD1#MA0355.1-10.009124354.34319110AAGAAGCAGTGACCTGCAGCA+
Foxq1#MA0040.100.01116725.3156111AAGAAGCAGTGAATAAACAATA-
odd#MA0454.120.01177135.6031419AAGAAGCAGTGAACAGTAGCAG+
Myf#MA0055.100.01385746.59613111AAGAAGCAGTGCAGCAGCTGCTG+
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