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MacroAPE 1083:13-GGCTGKTACT: Difference between revisions

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11C9;0.741054!10788-110H5;0.868381!10792-110H9;0.791649!10765-110E9;0.659764!10829-111D1;0.926481!10830-111D2;0.493339!10831-111D3;0.420124!10832-111D4;0.313855!10833-111D5;0.730348!10764-110E8;0.701754!10770-110F5;0.895881!10399-106A3;0.669935!10400-106A4;0.936038!10405-106A9;0.973252!10834-111D6;0.957235!10835-111D7;0.948673!10836-111D8;0.637668!10837-111D9;0.403998!10699-109G6;0.0833882!10802-111A1;0.962042!10796-110I4;0.72942!10010-101C1;0.656473!10810-111A9;0.466471!10421-106C7;0.807218!10708-109H6;0.179235!12235-129G3;0.852565!12236-129G4;0.819549!12237-129G5;0.802816!10167-103B5;0.906254!10151-102I7;0.0675184!10428-106D5;0.233382!10795-110I3;0.612464!10805-111A4;0.305017!10052-101G7;0.843413!10189-103D9;0.666591!10589-108D4;0.509005!10425-106D2;0.874759!10427-106D4;0.543154!10702-109G9;0.314732!10432-106D9;0.754693!10496-107C1;0.975324!10718-109I7;0.842957!10011-101C2;0.637403!10053-101G8;0.764361!10686-109F2;0.550272!10084-102B3;0.413128!10012-101C3;0.422798!10085-102B4;0.19691!10482-107A5;0.0305713!10419-106C5;0.570913!10080-102A8;0.726682!10760-110E4;0.476537!10709-109H7;0.640684!10710-109H8;0.614377!10703-109H1;0.439141!10719-109I8;0.726354!10642-109A3;0.106429!10177-103C6;0.939379!10164-103B2;0.203901!10173-103C2;0.0745713!10166-103B4;0.0698616!10083-102B2;0.0955286!10188-103D8;0.117869!10552-107I3;0.266264!10553-107I4;0.234915!10013-101C4;0.542481!10536-107G5;0.513455!10618-108G6;0.771416!10423-106C9;0.193692!10785-110H2;0.451659!12238-129G6;0.17992!12239-129G7;0.710761!12240-129G8;0.644528!10416-106C2;0.67997!10801-110I9;0.791841!10766-110F1;0.647369!10824-111C5;0.685022!10825-111C6;0.970736!10826-111C7;0.841797!10454-106G4;0.878103!10409-106B4;0.987467!10638-108I8;0.963626!10636-108I6;0.019679!10513-107D9;0.316079!10420-106C6;0.832255!10082-102B1;0.782723!10014-101C5;0.199931!10070-101I7;0.182699!10452-106G2;0.367436!10453-106G3;0.301685!10449-106F8;0.275579!10042-101F6;0.282198!10069-101I6;0.874916!10193-103E4;0.680577!10631-108I1;0.304887!10438-106E6;0.959548!10488-107B2;0.910018!10196-103E7;0.514664!10071-101I8;0.233407!10071-101I8;0.52248!10041-101F5;0.0331241!10451-106G1;0.92243!10450-106F9;0.768766!10604-108F1;0.893244!10605-108F2;0.552834!10606-108F3;0.330403!10603-108E9;0.572588!10497-107C2;0.13864!10448-106F7;0.478631!10643-109A4;0.190199!10426-106D3;0.607478!10431-106D8;0.698465!10197-103E8;0.904775!10443-106F2;0.213104!10815-111B5;0.502427!10816-111B6;0.597832!10817-111B7;0.715652!10015-101C6;0.601127!10410-106B5;0.446123!10054-101G9;0.977208!10758-110E2;0.995346!10711-109H9;0.859209!10040-101F4;0.150901!10470-106I2;0.144303!10415-106C1;0.309128!10198-103E9;0.0378199!10614-108G2;0.405818!10612-108F9;0.945548!10549-107H9;0.80154!10615-108G3;0.840739!10487-107B1;0.46377!10433-106E1;0.900273!10688-109F4;0.736236!10444-106F3;0.721642!10444-106F3;0.396586!10485-107A8;0.503249!10413-106B8;0.57173!10175-103C4;0.755!10161-103A8;0.288112!12131-128D7;0.68131!10624-108H3;0.970558!10712-109I1;0.0943727!10205-103F7;0.0396817!10206-103F8;0.608764!10207-103F9;0.467931!10050-101G5;0.0813325!10051-101G6;0.10498!10016-101C7;0.15822!10046-101G1;0.10347!10778-110G4;0.371689!10633-108I3;0.339521!10818-111B8;0.286112!10819-111B9;0.747753!10820-111C1;0.624953!10484-107A7;0.720992!10808-111A7;0.928079!10169-103B7;0.906363!10153-102I9;0.110021!13425-144D5;0.339922!13433-144E4;0.262723!13437-144E8;0.545784!11904-125F5;0.334382!11905-125F6;0.979484!10039-101F3;0.862956!10791-110H8;0.131763!10017-101C8;0.744491!10045-101F9;0.153106!10509-107D5;0.245819!10839-111E2;0.629162!10692-109F8;0.232384!10079-102A7;0.710041!10078-102A6;0.319425!10721-110A1;0.23198!10569-108B2;0.703191!10570-108B3;0.156808!10571-108B4;0.180381!10647-109A8;0.157339!10752-110D5;0.713009!10782-110G8;0.646857!10726-110A6;0.868691!10018-101C9;0.848255!10086-102B5;0.160041!10182-103D2;0.113848!10165-103B3;0.525211!10499-107C4;0.52433!10408-106B3;0.946539!10019-101D1;0.639613!10068-101I5;0.337701!10075-102A3;0.559178!10077-102A5;0.481678!10727-110A7;0.308064!10775-110G1;0.615263!10412-106B7;0.483205!12231-129F8;0.800672!12232-129F9;0.474046!12233-129G1;0.903892!12234-129G2;0.560014!10414-106B9;0.716611!10170-103B8;0.845547!10183-103D3;0.0823306!10150-102I6;0.102288!10174-103C3;0.181904!10155-103A2;0.803782!10038-101F2;0.858451!10838-111E1;0.680982!10759-110E3;0.606172!10514-107E1;0.697659!10465-106H6;0.15763!10691-109F7;0.223543!10843-111E6;0.852883!10844-111E7;0.435315!11747-123G1;0.186053!11748-123G2;0.279494!11749-123G3;0.277648!11750-123G4;0.157629!11751-123G5;0.869963!11840-124H4;0.658656!11752-123G6;0.795439!11753-123G7;0.449621!11754-123G8;0.249704!11755-123G9;0.666188!11756-123H1;0.882648!11833-124G6;0.515871!11760-123H5;0.356384!11836-124G9;0.446228!11758-123H3;0.329307!11835-124G8;0.672953!11762-123H7;0.616708!11838-124H2;0.703853!11757-123H2;0.225207!11759-123H4;0.515115!11761-123H6;0.709865!11842-124H6;0.16294!11837-124H1;0.278188!10568-108B1;0.541123!13230-141I8;0.319345!13231-141I9;0.529595!10696-109G3;0.461295!10493-107B7;0.938802!10494-107B8;0.368923!10850-111F4;0.359205!10851-111F5;0.00371504!10852-111F6;0.635536!10853-111F7;0.66496!10854-111F8;0.457639!10855-111F9;0.885169!10856-111G1;0.496461!10847-111F1;0.802205!10846-111E9;0.427454!10848-111F2;0.515679!10845-111E8;0.505558!10857-111G2;0.429561!10858-111G3;0.0257017!10156-103A3;0.879015!11901-125F2;0.222917!11902-125F3;0.301048!11903-125F4;0.345665!10689-109F5;0.176501!10648-109A9;0.421617!10784-110H1;0.596856!10744-110C6;0.505616!10772-110F7;0.648571!10474-106I6;0.986472!10600-108E6;0.469522!10684-109E9;0.401869!12226-129F3;0.923783!12227-129F4;0.152977!10508-107D4;0.32846!10539-107G8;0.117252!10607-108F4;0.731739!10555-107I6;0.517822!10774-110F9;0.730357!10637-108I7;0.65396!10663-109C6;0.150079!10728-110A8;0.0294785!10729-110A9;0.229211!10430-106D7;0.262152!10730-110B1;0.659186!10813-111B3;0.0932703!10812-111B2;0.766829!10037-101F1;0.789077!10172-103C1;0.1524!10163-103B1;0.148773!10076-102A4;0.235451!10073-102A1;0.160164!10036-101E9;0.0312863!10195-103E6;0.166055!10277-104E7;0.216256!10434-106E2;0.857228!10550-107I1;0.975463!10545-107H5;0.600523!10544-107H4;0.666395!10704-109H2;0.939235!10510-107D6;0.00241433!10558-107I9;0.577455!10020-101D2;0.679934!10732-110B3;0.318309!10049-101G4;0.483051!10698-109G5;0.420517!10437-106E5;0.365249!10417-106C3;0.997846!10035-101E8;0.294553!10171-103B9;0.138251!10157-103A4;0.150731!10034-101E7;0.182022!10072-101I9;0.160648!10199-103F1;0.0169775!10200-103F2;0.11438!10697-109G4;0.415169!10723-110A3;0.143858!10179-103C8;0.507303!10160-103A7;0.239385!10180-103C9;0.489594!10162-103A9;0.683029!10021-101D3;0.251221!10840-111E3;0.715474!10706-109H4;0.710767!10033-101E6;0.0306308!10032-101E5;0.409033!10490-107B4;0.167295!10439-106E7;0.873547!10022-101D4;0.721465!10176-103C5;0.402431!10469-106I1;0.0615688!10067-101I4;0.289584!10411-106B6;0.557542!10471-106I3;0.178938!10030-101E3;0.101816!10475-106I7;0.747333!10787-110H4;0.861695!10477-106I9;0.772305!10695-109G2;0.852241!11771-123I7;0.456169!11772-123I8;0.94435!11773-123I9;0.726738!10093-102C3;0.395501!10442-106F1;0.179527!10442-106F1;0.919006!10201-103F3;0.960995!10639-108I9;0.637048!11843-124H7;0.41559!11841-124H5;0.632193!10693-109F9;0.801994!10436-106E4;0.354207!10483-107A6;0.400808!10282-104F3;0.730404!10023-101D5;0.202297!10066-101I3;0.277505!10065-101I2;0.724905!10800-110I8;0.793737!10610-108F7;0.773497!10841-111E4;0.0689211!10541-107H1;0.331178!10842-111E5;0.762378!10562-108A4;0.678329!10024-101D6;0.27744!10064-101I1;0.110723!10609-108F6;0.243965!10048-101G3;0.0775008!10781-110G7;0.948452!10181-103D1;0.0639537!10159-103A6;0.860528!10056-101H2;0.867462!10737-110B8;0.522433!10025-101D7;0.656698!10044-101F8;0.138607!10424-106D1;0.0698104!10463-106H4;0.661071!10616-108G4;0.628035!10486-107A9;0.141005!10062-101H8;0.9963!10202-103F4;0.521449!10158-103A5;0.0775576!10441-106E9;0.919411!10031-101E4;0.874174!10063-101H9;0.207292!10063-101H9;0.0204599!11763-123H8;0.883714!11765-123I1;0.639666!11768-123I4;0.798209!10807-111A6;0.694047!10790-110H7;0.783969!10798-110I6;0.879027!10786-110H3;0.329294!10591-108D6;0.730372!10593-108D8;0.1402!10590-108D5;0.415404!10026-101D8;0.239002!10096-102C6;0.0293452!10168-103B6;0.256971!10154-103A1;0.516298!10209-103G2;0.477085!10061-101H7;0.105928!10027-101D9;0.506111!10043-101F7;0.622415!10783-110G9;0.616125!10028-101E1;0.243688!10060-101H6;0.274197!10203-103F5;0.978527!10059-101H5;0.157989!10047-101G2;0.212637!10029-101E2;0.160642!10058-101H4;0.0392286!10418-106C4;0.347169!10492-107B6;0.942159!10694-109G1;0.787549!10797-110I5;0.425439!10057-101H3;0.678672!10100-102D1;0.137829!10055-101H1;0.386108!10204-103F6;0.745348!10191-103E2;0.381559!10563-108A5;0.433062
|name=13-GGCTGKTACT,BestGuess:TEAD4_f1_HMv8(0.691325689706636),T:2800.0(39.80%),B:13514.0(32.45%),P:1e-32
|name=13-GGCTGKTACT,BestGuess:TEAD4_f1_HMv8(0.691325689706636),T:2800.0(39.80%),B:13514.0(32.45%),P:1e-32
|tomtom_result=ACE2#MA0267.1;0;0.00118707;0.565044;0.639676;7;GGCTGTTACT;TGCTGGT;-!Gamyb#MA0034.1;0;0.00220149;1.04791;0.639676;10;GGCTGTTACT;GGCGGTTGTC;-!SWI5#MA0402.1;0;0.00268881;1.27987;0.639676;8;GGCTGTTACT;TGCTGGTT;+!ovo#MA0126.1;-1;0.0035632;1.69608;0.639676;9;GGCTGTTACT;ACTGTTACT;-!prd#MA0239.1;-1;0.0035632;1.69608;0.639676;9;GGCTGTTACT;ACTGTTACT;-!Tcfcp2l1#MA0145.1;2;0.00403685;1.92154;0.639676;10;GGCTGTTACT;CTGGTTTGAACTGG;-!Spz1#MA0111.1;-1;0.00767779;3.65463;0.911821;9;GGCTGTTACT;GCTGTTACCCT;-!Myb#MA0100.1;0;0.00850766;4.04964;0.911821;8;GGCTGTTACT;GGCCGTTG;+!CRZ1#MA0285.1;2;0.00863146;4.10858;0.911821;7;GGCTGTTACT;GTGGCTTAG;-!Myf#MA0055.1;1;0.0175449;8.35139;0.998691;10;GGCTGTTACT;CAGCAGCTGCTG;-
}}
}}

Latest revision as of 14:17, 7 September 2012

Full Name: 13-GGCTGKTACT,BestGuess:TEAD4_f1_HMv8(0.691325689706636),T:2800.0(39.80%),B:13514.0(32.45%),P:1e-32

Motif matrix
POACGT
12.8403.22391.22.8
22.82.82791.62.8
32.82657.22.8137.2
42.82.82.82791.6
5243.68.41918.0630.0
614.0268.81246.01271.2
72.82.82.82791.6
81635.22.81159.22.8
922.41582.0120.41075.2
10140.039.22.82618.0

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ACE2#MA0267.100.001187070.5650440.6396767GGCTGTTACTTGCTGGT-
Gamyb#MA0034.100.002201491.047910.63967610GGCTGTTACTGGCGGTTGTC-
SWI5#MA0402.100.002688811.279870.6396768GGCTGTTACTTGCTGGTT+
ovo#MA0126.1-10.00356321.696080.6396769GGCTGTTACTACTGTTACT-
prd#MA0239.1-10.00356321.696080.6396769GGCTGTTACTACTGTTACT-
Tcfcp2l1#MA0145.120.004036851.921540.63967610GGCTGTTACTCTGGTTTGAACTGG-
Spz1#MA0111.1-10.007677793.654630.9118219GGCTGTTACTGCTGTTACCCT-
Myb#MA0100.100.008507664.049640.9118218GGCTGTTACTGGCCGTTG+
CRZ1#MA0285.120.008631464.108580.9118217GGCTGTTACTGTGGCTTAG-
Myf#MA0055.110.01754498.351390.99869110GGCTGTTACTCAGCAGCTGCTG-
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