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MacroAPE 1083:Motif GANTCT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;2192;0!02;2192;0;0;0!03;548;548;548;548!04;0;0;0;2192!05;0;2192;0;0!06;0;0;0;2192 |macroape_1083_sample_pvalues=11376-118A8;0.580758!1...")
 
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789-110H6;0.228063!10828-111C9;0.201027!10788-110H5;0.154753!10792-110H9;0.283047!10765-110E9;0.0949212!10829-111D1;0.212172!10830-111D2;0.256978!10831-111D3;0.522142!10832-111D4;0.500729!10833-111D5;0.504398!10764-110E8;0.406127!10770-110F5;0.602675!10399-106A3;0.123703!10400-106A4;0.517689!10405-106A9;0.532753!10834-111D6;0.501846!10835-111D7;0.367649!10836-111D8;0.411211!10837-111D9;0.471452!10699-109G6;0.259073!10802-111A1;0.205149!10796-110I4;0.388653!10010-101C1;0.829607!10810-111A9;0.806512!10421-106C7;0.721342!10708-109H6;0.62926!12235-129G3;0.298769!12236-129G4;0.0356361!12237-129G5;0.0158257!10167-103B5;0.0123277!10151-102I7;0.486135!10428-106D5;0.496176!10795-110I3;0.516761!10805-111A4;0.522714!10052-101G7;0.305427!10189-103D9;0.923862!10589-108D4;0.80396!10425-106D2;0.834299!10427-106D4;0.782645!10702-109G9;0.378551!10432-106D9;0.89728!10496-107C1;0.67801!10718-109I7;0.786704!10011-101C2;0.18958!10053-101G8;0.913579!10686-109F2;0.0718241!10084-102B3;0.764695!10012-101C3;0.539413!10085-102B4;0.574253!10482-107A5;0.384768!10419-106C5;0.903691!10080-102A8;0.724847!10760-110E4;0.644873!10709-109H7;0.353769!10710-109H8;0.554898!10703-109H1;0.730524!10719-109I8;0.72947!10642-109A3;0.605497!10177-103C6;0.47076!10164-103B2;0.512427!10173-103C2;0.534166!10166-103B4;0.381605!10083-102B2;0.354541!10188-103D8;0.435892!10552-107I3;0.577838!10553-107I4;0.541268!10013-101C4;0.287599!10536-107G5;0.576094!10618-108G6;0.187919!10423-106C9;0.437022!10785-110H2;0.255663!12238-129G6;0.359379!12239-129G7;0.0603621!12240-129G8;0.0427867!10416-106C2;0.178291!10801-110I9;0.0522097!10766-110F1;0.189757!10824-111C5;0.587999!10825-111C6;0.742769!10826-111C7;0.760523!10454-106G4;0.846399!10409-106B4;0.920513!10638-108I8;0.559823!10636-108I6;0.857458!10513-107D9;0.554458!10420-106C6;0.376734!10082-102B1;0.326068!10014-101C5;0.756912!10070-101I7;0.922933!10452-106G2;0.849198!10453-106G3;0.43771!10449-106F8;0.245124!10042-101F6;0.252502!10069-101I6;0.577759!10193-103E4;0.976585!10631-108I1;0.599409!10438-106E6;0.120848!10488-107B2;0.26014!10196-103E7;0.327602!10071-101I8;0.401091!10071-101I8;0.5997!10041-101F5;0.312051!10451-106G1;0.70665!10450-106F9;0.908133!10604-108F1;0.405794!10605-108F2;0.719601!10606-108F3;0.655138!10603-108E9;0.547182!10497-107C2;0.766593!10448-106F7;0.46241!10643-109A4;0.664931!10426-106D3;0.921995!10431-106D8;0.563394!10197-103E8;0.416227!10443-106F2;0.804388!10815-111B5;0.600252!10816-111B6;0.791128!10817-111B7;0.852191!10015-101C6;0.795427!10410-106B5;0.797923!10054-101G9;0.194774!10758-110E2;0.676316!10711-109H9;0.392518!10040-101F4;0.384156!10470-106I2;0.512943!10415-106C1;0.979177!10198-103E9;0.576564!10614-108G2;0.891001!10612-108F9;0.959876!10549-107H9;0.501076!10615-108G3;0.404204!10487-107B1;0.912502!10433-106E1;0.857678!10688-109F4;0.173998!10444-106F3;0.631143!10444-106F3;0.524275!10485-107A8;0.559841!10413-106B8;0.691884!10175-103C4;0.193452!10161-103A8;0.676179!12131-128D7;0.665496!10624-108H3;0.873689!10712-109I1;0.471038!10205-103F7;0.192201!10206-103F8;0.988797!10207-103F9;0.897181!10050-101G5;0.853816!10051-101G6;0.311179!10016-101C7;0.243636!10046-101G1;0.338784!10778-110G4;0.854058!10633-108I3;0.891893!10818-111B8;0.323202!10819-111B9;0.92183!10820-111C1;0.939687!10484-107A7;0.951178!10808-111A7;0.962955!10169-103B7;0.170711!10153-102I9;0.582229!13425-144D5;0.516899!13433-144E4;0.152393!13437-144E8;0.118419!11904-125F5;0.245!11905-125F6;0.973441!10039-101F3;0.801856!10791-110H8;0.531004!10017-101C8;0.351068!10045-101F9;0.687601!10509-107D5;0.181597!10839-111E2;0.0957927!10692-109F8;0.402145!10079-102A7;0.91307!10078-102A6;0.2547!10721-110A1;0.147573!10569-108B2;0.2361!10570-108B3;0.983762!10571-108B4;0.915637!10647-109A8;0.966735!10752-110D5;0.709657!10782-110G8;0.432793!10726-110A6;0.407731!10018-101C9;0.555735!10086-102B5;0.344959!10182-103D2;0.394138!10165-103B3;0.699435!10499-107C4;0.642857!10408-106B3;0.784721!10019-101D1;0.353231!10068-101I5;0.709062!10075-102A3;0.280544!10077-102A5;0.927778!10727-110A7;0.102922!10775-110G1;0.0543609!10412-106B7;0.129863!12231-129F8;0.743047!12232-129F9;0.82962!12233-129G1;0.67591!12234-129G2;0.833424!10414-106B9;0.761489!10170-103B8;0.695502!10183-103D3;0.465568!10150-102I6;0.514565!10174-103C3;0.581146!10155-103A2;0.72774!10038-101F2;0.518407!10838-111E1;0.616361!10759-110E3;0.784254!10514-107E1;0.920999!10465-106H6;0.478887!10691-109F7;0.541872!10843-111E6;0.375346!10844-111E7;0.846276!11747-123G1;0.52996!11748-123G2;0.21681!11749-123G3;0.504186!11750-123G4;0.893887!11751-123G5;0.779801!11840-124H4;0.718574!11752-123G6;0.461547!11753-123G7;0.351672!11754-123G8;0.735909!11755-123G9;0.925056!11756-123H1;0.546871!11833-124G6;0.774523!11760-123H5;0.655196!11836-124G9;0.982756!11758-123H3;0.577079!11835-124G8;0.77504!11762-123H7;0.715188!11838-124H2;0.939526!11757-123H2;0.907964!11759-123H4;0.656384!11761-123H6;0.653321!11842-124H6;0.970072!11837-124H1;0.649601!10568-108B1;0.542779!13230-141I8;0.915092!13231-141I9;0.507775!10696-109G3;0.679672!10493-107B7;0.952215!10494-107B8;0.740877!10850-111F4;0.451056!10851-111F5;0.0895796!10852-111F6;0.630389!10853-111F7;0.515096!10854-111F8;0.222974!10855-111F9;0.837274!10856-111G1;0.888738!10847-111F1;0.204014!10846-111E9;0.287718!10848-111F2;0.79448!10845-111E8;0.348332!10857-111G2;0.474967!10858-111G3;0.452209!10156-103A3;0.598936!11901-125F2;0.566562!11902-125F3;0.832181!11903-125F4;0.901546!10689-109F5;0.82536!10648-109A9;0.93124!10784-110H1;0.644592!10744-110C6;0.42702!10772-110F7;0.052451!10474-106I6;0.248357!10600-108E6;0.0180427!10684-109E9;0.32929!12226-129F3;0.614377!12227-129F4;0.929029!10508-107D4;0.133463!10539-107G8;0.659477!10607-108F4;0.269869!10555-107I6;0.500045!10774-110F9;0.673181!10637-108I7;0.968933!10663-109C6;0.452264!10728-110A8;0.0553412!10729-110A9;0.511942!10430-106D7;0.921252!10730-110B1;0.996497!10813-111B3;0.788842!10812-111B2;0.680957!10037-101F1;0.580548!10172-103C1;0.490141!10163-103B1;0.486827!10076-102A4;0.528441!10073-102A1;0.536828!10036-101E9;0.258145!10195-103E6;0.543253!10277-104E7;0.562234!10434-106E2;0.687561!10550-107I1;0.38418!10545-107H5;0.251942!10544-107H4;0.56027!10704-109H2;0.664336!10510-107D6;0.973082!10558-107I9;0.878943!10020-101D2;0.105035!10732-110B3;0.405144!10049-101G4;0.636011!10698-109G5;0.667683!10437-106E5;0.142324!10417-106C3;0.262677!10035-101E8;0.13964!10171-103B9;0.50911!10157-103A4;0.540923!10034-101E7;0.55296!10072-101I9;0.497563!10199-103F1;0.263517!10200-103F2;0.179144!10697-109G4;0.88647!10723-110A3;0.266356!10179-103C8;0.582564!10160-103A7;0.436147!10180-103C9;0.482795!10162-103A9;0.707499!10021-101D3;0.57453!10840-111E3;0.0337557!10706-109H4;0.239347!10033-101E6;0.560562!10032-101E5;0.548307!10490-107B4;0.553868!10439-106E7;0.830634!10022-101D4;0.647937!10176-103C5;0.737292!10469-106I1;0.449468!10067-101I4;0.152245!10411-106B6;0.721331!10471-106I3;0.637091!10030-101E3;0.754684!10475-106I7;0.771352!10787-110H4;0.858357!10477-106I9;0.270667!10695-109G2;0.163059!11771-123I7;0.572737!11772-123I8;0.331808!11773-123I9;0.0638396!10093-102C3;0.0857136!10442-106F1;0.695756!10442-106F1;0.415262!10201-103F3;0.71655!10639-108I9;0.392472!11843-124H7;0.38785!11841-124H5;0.668353!10693-109F9;0.554535!10436-106E4;0.563514!10483-107A6;0.862387!10282-104F3;0.391571!10023-101D5;0.47339!10066-101I3;0.723905!10065-101I2;0.549931!10800-110I8;0.645638!10610-108F7;0.530765!10841-111E4;0.0509182!10541-107H1;0.82071!10842-111E5;0.485477!10562-108A4;0.366262!10024-101D6;0.374776!10064-101I1;0.912961!10609-108F6;0.657643!10048-101G3;0.0842335!10781-110G7;0.765578!10181-103D1;0.514874!10159-103A6;0.696761!10056-101H2;0.648077!10737-110B8;0.630451!10025-101D7;0.866525!10044-101F8;0.359681!10424-106D1;0.868096!10463-106H4;0.463415!10616-108G4;0.581742!10486-107A9;0.890427!10062-101H8;0.875203!10202-103F4;0.506958!10158-103A5;0.479564!10441-106E9;0.655979!10031-101E4;0.00529901!10063-101H9;0.526974!10063-101H9;0.315748!11763-123H8;0.718472!11765-123I1;0.815013!11768-123I4;0.778201!10807-111A6;0.518322!10790-110H7;0.0121444!10798-110I6;0.0371364!10786-110H3;0.0437024!10591-108D6;0.0347488!10593-108D8;0.00971674!10590-108D5;0.00366539!10026-101D8;0.220583!10096-102C6;0.672232!10168-103B6;0.636463!10154-103A1;0.681716!10209-103G2;0.544276!10061-101H7;0.828806!10027-101D9;0.920814!10043-101F7;0.868441!10783-110G9;0.887141!10028-101E1;0.536156!10060-101H6;0.506129!10203-103F5;0.779874!10059-101H5;0.927676!10047-101G2;0.719969!10029-101E2;0.562011!10058-101H4;0.998648!10418-106C4;0.947001!10492-107B6;0.729652!10694-109G1;0.653745!10797-110I5;0.201488!10057-101H3;0.375523!10100-102D1;0.91514!10055-101H1;0.552873!10204-103F6;0.277862!10191-103E2;0.37435!10563-108A5;0.800458
|name=motif_GANTCT
|name=motif_GANTCT
|tomtom_result=ARG80#MA0271.1;0;0.00612994;2.91785;1;6;GAATCT;GCGTCT;-!ARG81#MA0272.1;2;0.00687634;3.27314;1;6;GAATCT;GTGACTCT;+!ARR10#MA0121.1;2;0.0177151;8.43238;1;6;GAATCT;GCGGATCT;-
}}
}}

Latest revision as of 13:05, 7 September 2012

Full Name: motif_GANTCT

Motif matrix
POACGT
010021920
022192000
03548548548548
040002192
050219200
060002192

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ARG80#MA0271.100.006129942.9178516GAATCTGCGTCT-
ARG81#MA0272.120.006876343.2731416GAATCTGTGACTCT+
ARR10#MA0121.120.01771518.4323816GAATCTGCGGATCT-
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