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MacroAPE 1083:Motif TNATGC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;5280!02;1320;1320;1320;1320!03;5280;0;0;0!04;0;0;0;5280!05;0;0;5280;0!06;0;5280;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.4221...")
 
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9-110H6;0.554173!10828-111C9;0.354231!10788-110H5;0.589576!10792-110H9;0.259027!10765-110E9;0.474462!10829-111D1;0.311211!10830-111D2;0.395041!10831-111D3;0.629174!10832-111D4;0.275285!10833-111D5;0.262879!10764-110E8;0.280411!10770-110F5;0.197463!10399-106A3;0.640878!10400-106A4;0.232174!10405-106A9;0.185134!10834-111D6;0.215221!10835-111D7;0.280502!10836-111D8;0.144914!10837-111D9;0.889171!10699-109G6;0.51342!10802-111A1;0.193095!10796-110I4;0.350958!10010-101C1;0.223102!10810-111A9;0.87909!10421-106C7;0.188404!10708-109H6;0.0933514!12235-129G3;0.289495!12236-129G4;0.0218549!12237-129G5;0.0594!10167-103B5;0.0214348!10151-102I7;0.126724!10428-106D5;0.0504167!10795-110I3;0.460603!10805-111A4;0.243128!10052-101G7;0.603833!10189-103D9;0.245918!10589-108D4;0.927699!10425-106D2;0.108559!10427-106D4;0.738891!10702-109G9;0.341219!10432-106D9;0.0186894!10496-107C1;0.11402!10718-109I7;0.503541!10011-101C2;0.581985!10053-101G8;0.7695!10686-109F2;0.54109!10084-102B3;0.883945!10012-101C3;0.0363708!10085-102B4;0.0694652!10482-107A5;0.00876364!10419-106C5;0.235377!10080-102A8;0.0197181!10760-110E4;0.429351!10709-109H7;0.30985!10710-109H8;0.0700704!10703-109H1;0.227567!10719-109I8;0.721953!10642-109A3;0.728063!10177-103C6;0.449236!10164-103B2;0.093272!10173-103C2;0.0587332!10166-103B4;0.165679!10083-102B2;0.0836739!10188-103D8;0.047066!10552-107I3;0.0736212!10553-107I4;0.873657!10013-101C4;0.773822!10536-107G5;0.969593!10618-108G6;0.560147!10423-106C9;0.109504!10785-110H2;0.0493169!12238-129G6;0.0263411!12239-129G7;0.317211!12240-129G8;0.426668!10416-106C2;0.502503!10801-110I9;0.469592!10766-110F1;0.39963!10824-111C5;0.341475!10825-111C6;0.538393!10826-111C7;0.627681!10454-106G4;0.454511!10409-106B4;0.331819!10638-108I8;0.440346!10636-108I6;0.242456!10513-107D9;0.2494!10420-106C6;0.063475!10082-102B1;0.386511!10014-101C5;0.66514!10070-101I7;0.71074!10452-106G2;0.950459!10453-106G3;0.910931!10449-106F8;0.790686!10042-101F6;0.550878!10069-101I6;0.0746148!10193-103E4;0.965672!10631-108I1;0.105971!10438-106E6;0.600236!10488-107B2;0.289761!10196-103E7;0.560411!10071-101I8;0.402378!10071-101I8;0.701232!10041-101F5;0.0401741!10451-106G1;0.64344!10450-106F9;0.5475!10604-108F1;0.169245!10605-108F2;0.55194!10606-108F3;0.667824!10603-108E9;0.4761!10497-107C2;0.505887!10448-106F7;0.297399!10643-109A4;0.753897!10426-106D3;0.0660452!10431-106D8;0.193404!10197-103E8;0.173646!10443-106F2;0.844188!10815-111B5;0.550152!10816-111B6;0.36269!10817-111B7;0.52284!10015-101C6;0.350451!10410-106B5;0.981732!10054-101G9;0.289512!10758-110E2;0.311029!10711-109H9;0.355226!10040-101F4;0.145381!10470-106I2;0.134294!10415-106C1;0.281085!10198-103E9;0.219732!10614-108G2;0.760512!10612-108F9;0.309128!10549-107H9;0.231759!10615-108G3;0.515151!10487-107B1;0.756056!10433-106E1;0.765217!10688-109F4;0.852413!10444-106F3;0.689875!10444-106F3;0.122874!10485-107A8;0.104047!10413-106B8;0.304742!10175-103C4;0.169411!10161-103A8;0.112599!12131-128D7;0.0626506!10624-108H3;0.50771!10712-109I1;0.898698!10205-103F7;0.566678!10206-103F8;0.78651!10207-103F9;0.987383!10050-101G5;0.942693!10051-101G6;0.859158!10016-101C7;0.819928!10046-101G1;0.78521!10778-110G4;0.878072!10633-108I3;0.423061!10818-111B8;0.20732!10819-111B9;0.219791!10820-111C1;0.23036!10484-107A7;0.218862!10808-111A7;0.0970488!10169-103B7;0.319011!10153-102I9;0.102162!13425-144D5;0.0609862!13433-144E4;0.60602!13437-144E8;0.782039!11904-125F5;0.562189!11905-125F6;0.537568!10039-101F3;0.252255!10791-110H8;0.113682!10017-101C8;0.567262!10045-101F9;0.348216!10509-107D5;0.853668!10839-111E2;0.265309!10692-109F8;0.203978!10079-102A7;0.46793!10078-102A6;0.791866!10721-110A1;0.843226!10569-108B2;0.423352!10570-108B3;0.565588!10571-108B4;0.62278!10647-109A8;0.973325!10752-110D5;0.435167!10782-110G8;0.681433!10726-110A6;0.188074!10018-101C9;0.188555!10086-102B5;0.194129!10182-103D2;0.771948!10165-103B3;0.0524552!10499-107C4;0.0495387!10408-106B3;0.288953!10019-101D1;0.151102!10068-101I5;0.754235!10075-102A3;0.767028!10077-102A5;0.923518!10727-110A7;0.8675!10775-110G1;0.30373!10412-106B7;0.558291!12231-129F8;0.138383!12232-129F9;0.525783!12233-129G1;0.951134!12234-129G2;0.954635!10414-106B9;0.476807!10170-103B8;0.57398!10183-103D3;0.153661!10150-102I6;0.105276!10174-103C3;0.0742801!10155-103A2;0.0961361!10038-101F2;0.0818957!10838-111E1;0.0728425!10759-110E3;0.449609!10514-107E1;0.135741!10465-106H6;0.841476!10691-109F7;0.963955!10843-111E6;0.406453!10844-111E7;0.793358!11747-123G1;0.413913!11748-123G2;0.610819!11749-123G3;0.345728!11750-123G4;0.932066!11751-123G5;0.61129!11840-124H4;0.604235!11752-123G6;0.403014!11753-123G7;0.0168257!11754-123G8;0.141951!11755-123G9;0.499679!11756-123H1;0.199014!11833-124G6;0.337815!11760-123H5;0.463577!11836-124G9;0.18771!11758-123H3;0.706107!11835-124G8;0.62839!11762-123H7;0.932647!11838-124H2;0.828954!11757-123H2;0.936967!11759-123H4;0.0394637!11761-123H6;0.411791!11842-124H6;0.749898!11837-124H1;0.212388!10568-108B1;0.828728!13230-141I8;0.156778!13231-141I9;0.655484!10696-109G3;0.499322!10493-107B7;0.12702!10494-107B8;0.186322!10850-111F4;0.118021!10851-111F5;0.316161!10852-111F6;0.719444!10853-111F7;0.338801!10854-111F8;0.960383!10855-111F9;0.7952!10856-111G1;0.317687!10847-111F1;0.53901!10846-111E9;0.912139!10848-111F2;0.572369!10845-111E8;0.782487!10857-111G2;0.304751!10858-111G3;0.33186!10156-103A3;0.92977!11901-125F2;0.0888716!11902-125F3;0.0676767!11903-125F4;0.537506!10689-109F5;0.379235!10648-109A9;0.628318!10784-110H1;0.239874!10744-110C6;0.196321!10772-110F7;0.399243!10474-106I6;0.45976!10600-108E6;0.919176!10684-109E9;0.371012!12226-129F3;0.701924!12227-129F4;0.927228!10508-107D4;0.603474!10539-107G8;0.318244!10607-108F4;0.493754!10555-107I6;0.385237!10774-110F9;0.552921!10637-108I7;0.551491!10663-109C6;0.78032!10728-110A8;0.646458!10729-110A9;0.928037!10430-106D7;0.098574!10730-110B1;0.363867!10813-111B3;0.710642!10812-111B2;0.020191!10037-101F1;0.747154!10172-103C1;0.105265!10163-103B1;0.244567!10076-102A4;0.100236!10073-102A1;0.103836!10036-101E9;0.0454888!10195-103E6;0.0822725!10277-104E7;0.0858093!10434-106E2;0.155611!10550-107I1;0.412877!10545-107H5;0.353898!10544-107H4;0.174691!10704-109H2;0.345479!10510-107D6;0.00604764!10558-107I9;0.44944!10020-101D2;0.125484!10732-110B3;0.747962!10049-101G4;0.333252!10698-109G5;0.715049!10437-106E5;0.0557815!10417-106C3;0.809085!10035-101E8;0.0325061!10171-103B9;0.113566!10157-103A4;0.135316!10034-101E7;0.0828499!10072-101I9;0.111!10199-103F1;0.0596597!10200-103F2;0.70577!10697-109G4;0.984196!10723-110A3;0.692609!10179-103C8;0.356981!10160-103A7;0.338452!10180-103C9;0.305758!10162-103A9;0.475177!10021-101D3;0.56231!10840-111E3;0.642821!10706-109H4;0.434538!10033-101E6;0.104412!10032-101E5;0.106111!10490-107B4;0.105897!10439-106E7;0.346635!10022-101D4;0.278059!10176-103C5;0.885379!10469-106I1;0.0788801!10067-101I4;0.0219773!10411-106B6;0.754823!10471-106I3;0.184479!10030-101E3;0.3018!10475-106I7;0.304074!10787-110H4;0.777046!10477-106I9;0.159542!10695-109G2;0.511778!11771-123I7;0.965989!11772-123I8;0.759916!11773-123I9;0.98201!10093-102C3;0.886771!10442-106F1;0.517144!10442-106F1;0.657286!10201-103F3;0.67648!10639-108I9;0.541881!11843-124H7;0.185967!11841-124H5;0.873593!10693-109F9;0.468288!10436-106E4;0.412648!10483-107A6;0.506497!10282-104F3;0.0503926!10023-101D5;0.496966!10066-101I3;0.838138!10065-101I2;0.78993!10800-110I8;0.908358!10610-108F7;0.841889!10841-111E4;0.232048!10541-107H1;0.711094!10842-111E5;0.7097!10562-108A4;0.507745!10024-101D6;0.637767!10064-101I1;0.418743!10609-108F6;0.416913!10048-101G3;0.793343!10781-110G7;0.792817!10181-103D1;0.855212!10159-103A6;0.0738344!10056-101H2;0.0720053!10737-110B8;0.047728!10025-101D7;0.200585!10044-101F8;0.522217!10424-106D1;0.859212!10463-106H4;0.146379!10616-108G4;0.254039!10486-107A9;0.21593!10062-101H8;0.014741!10202-103F4;0.957908!10158-103A5;0.641966!10441-106E9;0.10738!10031-101E4;0.0310117!10063-101H9;0.0778688!10063-101H9;0.0507844!11763-123H8;0.977365!11765-123I1;0.512291!11768-123I4;0.096757!10807-111A6;0.236056!10790-110H7;0.638978!10798-110I6;0.409158!10786-110H3;0.0250741!10591-108D6;0.455911!10593-108D8;0.379609!10590-108D5;0.214212!10026-101D8;0.645012!10096-102C6;0.906791!10168-103B6;0.872847!10154-103A1;0.112758!10209-103G2;0.0858599!10061-101H7;0.785012!10027-101D9;0.849492!10043-101F7;0.406546!10783-110G9;0.527479!10028-101E1;0.808978!10060-101H6;0.495418!10203-103F5;0.50793!10059-101H5;0.945963!10047-101G2;0.793906!10029-101E2;0.775047!10058-101H4;0.699949!10418-106C4;0.750585!10492-107B6;0.48645!10694-109G1;0.857251!10797-110I5;0.975474!10057-101H3;0.331331!10100-102D1;0.851613!10055-101H1;0.958627!10204-103F6;0.89371!10191-103E2;0.984037!10563-108A5;0.780714
|name=motif_TNATGC
|name=motif_TNATGC
|tomtom_result=Pou5f1#MA0142.1;5;0.000638839;0.304088;0.608175;6;TAATGC;CTTTGTTATGCAAAT;+!Sox2#MA0143.1;6;0.00183363;0.87281;0.87281;6;TAATGC;CCTTTGTTATGCAAA;+!Pax6#MA0069.1;3;0.00465954;2.21794;1;6;TAATGC;AACTCATGCGTGAA;-!PHD1#MA0355.1;0;0.0090191;4.29309;1;6;TAATGC;TGCTGCAGGT;-!znf143#MA0088.1;9;0.0119031;5.6659;1;6;TAATGC;GATTTCCCATAATGCCTTGC;+!SOK2#MA0385.1;1;0.0192936;9.18376;1;6;TAATGC;TGCCTGCAGGT;-
}}
}}

Latest revision as of 13:03, 7 September 2012

Full Name: motif_TNATGC

Motif matrix
POACGT
010005280
021320132013201320
035280000
040005280
050052800
060528000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Pou5f1#MA0142.150.0006388390.3040880.6081756TAATGCCTTTGTTATGCAAAT+
Sox2#MA0143.160.001833630.872810.872816TAATGCCCTTTGTTATGCAAA+
Pax6#MA0069.130.004659542.2179416TAATGCAACTCATGCGTGAA-
PHD1#MA0355.100.00901914.2930916TAATGCTGCTGCAGGT-
znf143#MA0088.190.01190315.665916TAATGCGATTTCCCATAATGCCTTGC+
SOK2#MA0385.110.01929369.1837616TAATGCTGCCTGCAGGT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_TNATGC&oldid=2133865"