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MacroAPE 1083:Motif TNCTGA: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;216768!02;54192;54192;54192;54192!03;0;216768;0;0!04;0;0;0;216768!05;0;0;216768;0!06;216768;0;0;0 |macroape_1083_sample_pvalues=1137...")
 
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111C8;0.270268!10789-110H6;0.911304!10828-111C9;0.991568!10788-110H5;0.260618!10792-110H9;0.338469!10765-110E9;0.774143!10829-111D1;0.894278!10830-111D2;0.527082!10831-111D3;0.594915!10832-111D4;0.913717!10833-111D5;0.346858!10764-110E8;0.545503!10770-110F5;0.83455!10399-106A3;0.658411!10400-106A4;0.801584!10405-106A9;0.891808!10834-111D6;0.808655!10835-111D7;0.404441!10836-111D8;0.227273!10837-111D9;0.335036!10699-109G6;0.321724!10802-111A1;0.979689!10796-110I4;0.794586!10010-101C1;0.0116051!10810-111A9;0.0987385!10421-106C7;0.15604!10708-109H6;0.864189!12235-129G3;0.155743!12236-129G4;0.318973!12237-129G5;0.635053!10167-103B5;0.293574!10151-102I7;0.0253422!10428-106D5;0.0206316!10795-110I3;0.222653!10805-111A4;0.644693!10052-101G7;0.0810445!10189-103D9;0.0470484!10589-108D4;0.205395!10425-106D2;0.959679!10427-106D4;0.0423398!10702-109G9;0.570949!10432-106D9;0.540589!10496-107C1;0.00688334!10718-109I7;0.0593333!10011-101C2;0.534371!10053-101G8;0.186541!10686-109F2;0.625968!10084-102B3;0.566423!10012-101C3;0.0367256!10085-102B4;0.031576!10482-107A5;0.127849!10419-106C5;0.0555505!10080-102A8;0.10875!10760-110E4;0.591209!10709-109H7;0.0222141!10710-109H8;0.0109556!10703-109H1;0.0253463!10719-109I8;0.985441!10642-109A3;0.851942!10177-103C6;0.842586!10164-103B2;0.0105857!10173-103C2;0.00343644!10166-103B4;0.020751!10083-102B2;0.0147276!10188-103D8;0.0306954!10552-107I3;0.0417793!10553-107I4;0.144249!10013-101C4;0.0332801!10536-107G5;0.171261!10618-108G6;0.231241!10423-106C9;0.250329!10785-110H2;0.0814097!12238-129G6;0.115691!12239-129G7;0.959837!12240-129G8;0.420233!10416-106C2;0.36264!10801-110I9;0.832885!10766-110F1;0.938942!10824-111C5;0.640163!10825-111C6;0.148296!10826-111C7;0.145737!10454-106G4;0.178825!10409-106B4;0.0960952!10638-108I8;0.380366!10636-108I6;0.186758!10513-107D9;0.113067!10420-106C6;0.0602966!10082-102B1;0.164284!10014-101C5;0.846075!10070-101I7;0.267077!10452-106G2;0.218693!10453-106G3;0.977159!10449-106F8;0.74464!10042-101F6;0.685351!10069-101I6;0.0218396!10193-103E4;0.34432!10631-108I1;0.0235284!10438-106E6;0.176626!10488-107B2;0.0353003!10196-103E7;0.168577!10071-101I8;0.707122!10071-101I8;0.12053!10041-101F5;0.152725!10451-106G1;0.0291469!10450-106F9;0.222757!10604-108F1;0.0261423!10605-108F2;0.122687!10606-108F3;0.0818593!10603-108E9;0.124181!10497-107C2;0.218054!10448-106F7;0.368343!10643-109A4;0.468674!10426-106D3;0.0128706!10431-106D8;0.0178335!10197-103E8;0.0221536!10443-106F2;0.177964!10815-111B5;0.435091!10816-111B6;0.0601426!10817-111B7;0.065153!10015-101C6;0.0489153!10410-106B5;0.287661!10054-101G9;0.30973!10758-110E2;0.034073!10711-109H9;0.962559!10040-101F4;0.235877!10470-106I2;0.0358879!10415-106C1;0.00972182!10198-103E9;0.011968!10614-108G2;0.342357!10612-108F9;0.0470878!10549-107H9;0.075595!10615-108G3;0.180329!10487-107B1;0.630102!10433-106E1;0.307432!10688-109F4;0.109546!10444-106F3;0.0472257!10444-106F3;0.403042!10485-107A8;0.366543!10413-106B8;0.230716!10175-103C4;0.444751!10161-103A8;0.0106658!12131-128D7;0.00659563!10624-108H3;0.998591!10712-109I1;0.490367!10205-103F7;0.759871!10206-103F8;0.210068!10207-103F9;0.186878!10050-101G5;0.139474!10051-101G6;0.951466!10016-101C7;0.433836!10046-101G1;0.432992!10778-110G4;0.316977!10633-108I3;0.443181!10818-111B8;0.345469!10819-111B9;0.153148!10820-111C1;0.147941!10484-107A7;0.16352!10808-111A7;0.0156644!10169-103B7;0.540109!10153-102I9;0.0363164!13425-144D5;0.0195249!13433-144E4;0.14384!13437-144E8;0.318298!11904-125F5;0.39609!11905-125F6;0.929139!10039-101F3;0.602725!10791-110H8;0.0373297!10017-101C8;0.0833483!10045-101F9;0.437974!10509-107D5;0.903717!10839-111E2;0.11129!10692-109F8;0.35931!10079-102A7;0.0530982!10078-102A6;0.262135!10721-110A1;0.519113!10569-108B2;0.11717!10570-108B3;0.685869!10571-108B4;0.708949!10647-109A8;0.519055!10752-110D5;0.0213591!10782-110G8;0.227666!10726-110A6;0.338834!10018-101C9;0.103311!10086-102B5;0.588716!10182-103D2;0.55353!10165-103B3;0.0138815!10499-107C4;0.0102921!10408-106B3;0.363387!10019-101D1;0.0650222!10068-101I5;0.0568355!10075-102A3;0.334994!10077-102A5;0.0673186!10727-110A7;0.252747!10775-110G1;0.606606!10412-106B7;0.503691!12231-129F8;0.034813!12232-129F9;0.587839!12233-129G1;0.999443!12234-129G2;0.67657!10414-106B9;0.584663!10170-103B8;0.101932!10183-103D3;0.0420639!10150-102I6;0.03781!10174-103C3;0.0205203!10155-103A2;0.0428058!10038-101F2;0.0193851!10838-111E1;0.0167926!10759-110E3;0.690536!10514-107E1;0.0877803!10465-106H6;0.27122!10691-109F7;0.436353!10843-111E6;0.0665386!10844-111E7;0.618578!11747-123G1;0.663142!11748-123G2;0.697362!11749-123G3;0.919243!11750-123G4;0.481142!11751-123G5;0.420614!11840-124H4;0.616316!11752-123G6;0.991718!11753-123G7;0.724129!11754-123G8;0.590418!11755-123G9;0.306223!11756-123H1;0.460887!11833-124G6;0.514928!11760-123H5;0.610265!11836-124G9;0.284466!11758-123H3;0.896647!11835-124G8;0.666983!11762-123H7;0.92772!11838-124H2;0.303658!11757-123H2;0.95584!11759-123H4;0.687447!11761-123H6;0.889889!11842-124H6;0.272229!11837-124H1;0.883627!10568-108B1;0.797228!13230-141I8;0.612889!13231-141I9;0.962207!10696-109G3;0.966676!10493-107B7;0.59011!10494-107B8;0.173028!10850-111F4;0.330252!10851-111F5;0.0407542!10852-111F6;0.215504!10853-111F7;0.731865!10854-111F8;0.0857833!10855-111F9;0.402762!10856-111G1;0.472695!10847-111F1;0.391365!10846-111E9;0.343636!10848-111F2;0.16226!10845-111E8;0.0807964!10857-111G2;0.0775513!10858-111G3;0.146091!10156-103A3;0.0314643!11901-125F2;0.0168394!11902-125F3;0.916724!11903-125F4;0.919425!10689-109F5;0.976176!10648-109A9;0.134973!10784-110H1;0.0415162!10744-110C6;0.0145256!10772-110F7;0.991554!10474-106I6;0.240075!10600-108E6;0.861668!10684-109E9;0.487363!12226-129F3;0.501808!12227-129F4;0.0888984!10508-107D4;0.618934!10539-107G8;0.478355!10607-108F4;0.902284!10555-107I6;0.3237!10774-110F9;0.469841!10637-108I7;0.230381!10663-109C6;0.850219!10728-110A8;0.373738!10729-110A9;0.270467!10430-106D7;0.479328!10730-110B1;0.287252!10813-111B3;0.668063!10812-111B2;0.680377!10037-101F1;0.410294!10172-103C1;0.0243505!10163-103B1;0.0679387!10076-102A4;0.0184751!10073-102A1;0.0597829!10036-101E9;0.217505!10195-103E6;0.0459091!10277-104E7;0.030379!10434-106E2;0.0247516!10550-107I1;0.049284!10545-107H5;0.0328814!10544-107H4;0.0258436!10704-109H2;0.0299123!10510-107D6;0.956337!10558-107I9;0.149536!10020-101D2;0.0968654!10732-110B3;0.31074!10049-101G4;0.464707!10698-109G5;0.991159!10437-106E5;0.122843!10417-106C3;0.314696!10035-101E8;0.0187851!10171-103B9;0.0386659!10157-103A4;0.0335361!10034-101E7;0.0260793!10072-101I9;0.0376901!10199-103F1;0.163177!10200-103F2;0.932689!10697-109G4;0.214696!10723-110A3;0.388639!10179-103C8;0.00117804!10160-103A7;0.000581787!10180-103C9;5.39173e-05!10162-103A9;0.00777747!10021-101D3;0.0026952!10840-111E3;0.590712!10706-109H4;0.672724!10033-101E6;0.413878!10032-101E5;0.0120027!10490-107B4;0.0378436!10439-106E7;0.0499156!10022-101D4;0.00443038!10176-103C5;0.247184!10469-106I1;0.00703862!10067-101I4;0.0996049!10411-106B6;0.173649!10471-106I3;0.229506!10030-101E3;0.144579!10475-106I7;0.0244464!10787-110H4;0.7527!10477-106I9;0.0107881!10695-109G2;0.576051!11771-123I7;0.547554!11772-123I8;0.0957506!11773-123I9;0.0124797!10093-102C3;0.162836!10442-106F1;0.879251!10442-106F1;0.716777!10201-103F3;0.772277!10639-108I9;0.368289!11843-124H7;0.0011563!11841-124H5;0.0225619!10693-109F9;0.0753001!10436-106E4;0.0593311!10483-107A6;0.0218392!10282-104F3;0.070926!10023-101D5;0.478368!10066-101I3;0.45773!10065-101I2;0.481103!10800-110I8;0.393534!10610-108F7;0.137219!10841-111E4;0.24908!10541-107H1;0.0514496!10842-111E5;0.0689584!10562-108A4;0.53482!10024-101D6;0.962172!10064-101I1;0.0916565!10609-108F6;0.223791!10048-101G3;0.841467!10781-110G7;0.143843!10181-103D1;0.553172!10159-103A6;0.0280126!10056-101H2;0.0225612!10737-110B8;0.0705721!10025-101D7;0.895428!10044-101F8;0.076488!10424-106D1;0.118926!10463-106H4;0.335963!10616-108G4;0.025057!10486-107A9;0.527028!10062-101H8;0.0965444!10202-103F4;0.164259!10158-103A5;0.446126!10441-106E9;0.0266425!10031-101E4;0.00708878!10063-101H9;0.0423703!10063-101H9;0.221461!11763-123H8;0.0996276!11765-123I1;0.992508!11768-123I4;0.989249!10807-111A6;0.950473!10790-110H7;0.0222261!10798-110I6;0.0562362!10786-110H3;0.726038!10591-108D6;0.155635!10593-108D8;0.128861!10590-108D5;0.10425!10026-101D8;0.178451!10096-102C6;0.925821!10168-103B6;0.539967!10154-103A1;0.0233473!10209-103G2;0.00894874!10061-101H7;0.235614!10027-101D9;0.423082!10043-101F7;0.588087!10783-110G9;0.297619!10028-101E1;0.134229!10060-101H6;0.632784!10203-103F5;0.370709!10059-101H5;0.435106!10047-101G2;0.462552!10029-101E2;0.293009!10058-101H4;0.240979!10418-106C4;0.306415!10492-107B6;0.00142441!10694-109G1;0.117441!10797-110I5;0.941799!10057-101H3;0.0870874!10100-102D1;0.312417!10055-101H1;0.194308!10204-103F6;0.475267!10191-103E2;0.393599!10563-108A5;0.075873
|name=motif_TNCTGA
|name=motif_TNCTGA
|tomtom_result=REST#MA0138.2;14;0.00159096;0.757295;1;6;TACTGA;GGCGCTGTCCATGGTGCTGAA;-!REST#MA0138.2;13;0.00293816;1.39856;1;6;TACTGA;GCGCTGTCCATGGTGCTGA;+!NFE2L2#MA0150.1;0;0.0117048;5.57148;1;6;TACTGA;TGCTGAGTCAT;-!HAP4#MA0315.1;4;0.0209943;9.99327;1;6;TACTGA;TCGCCTCTGATTGGT;-
}}
}}

Latest revision as of 13:03, 7 September 2012

Full Name: motif_TNCTGA

Motif matrix
POACGT
01000216768
0254192541925419254192
03021676800
04000216768
05002167680
06216768000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
REST#MA0138.2140.001590960.75729516TACTGAGGCGCTGTCCATGGTGCTGAA-
REST#MA0138.2130.002938161.3985616TACTGAGCGCTGTCCATGGTGCTGA+
NFE2L2#MA0150.100.01170485.5714816TACTGATGCTGAGTCAT-
HAP4#MA0315.140.02099439.9932716TACTGATCGCCTCTGATTGGT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_TNCTGA&oldid=2133864"