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MacroAPE 1083:Motif CNGCAT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;2832;0;0!02;708;708;708;708!03;0;0;2832;0!04;0;2832;0;0!05;2832;0;0;0!06;0;0;0;2832 |macroape_1083_sample_pvalues=11376-118A8;0.0797273!...")
 
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06G5;0.419206!10534-107G3;0.310238!10429-106D6;0.188744!10464-106H5;0.11695!10827-111C8;0.418284!10789-110H6;0.723824!10828-111C9;0.162715!10788-110H5;0.233138!10792-110H9;0.11748!10765-110E9;0.344587!10829-111D1;0.0384462!10830-111D2;0.354513!10831-111D3;0.109148!10832-111D4;0.538785!10833-111D5;0.130708!10764-110E8;0.135236!10770-110F5;0.0945823!10399-106A3;0.770846!10400-106A4;0.0349692!10405-106A9;0.0335164!10834-111D6;0.0294928!10835-111D7;0.378061!10836-111D8;0.0517995!10837-111D9;0.278501!10699-109G6;0.252826!10802-111A1;0.211351!10796-110I4;0.168814!10010-101C1;0.0230014!10810-111A9;0.5606!10421-106C7;0.532638!10708-109H6;0.00537709!12235-129G3;0.10933!12236-129G4;0.0605812!12237-129G5;0.0317231!10167-103B5;0.0250406!10151-102I7;0.0502905!10428-106D5;0.0428613!10795-110I3;0.810138!10805-111A4;0.0608601!10052-101G7;0.909169!10189-103D9;0.203871!10589-108D4;0.371868!10425-106D2;0.226126!10427-106D4;0.854941!10702-109G9;0.0077551!10432-106D9;0.0618732!10496-107C1;0.153357!10718-109I7;0.0270804!10011-101C2;0.0750715!10053-101G8;0.603611!10686-109F2;0.413972!10084-102B3;0.914817!10012-101C3;0.00607332!10085-102B4;0.0229579!10482-107A5;0.0601612!10419-106C5;0.0861692!10080-102A8;0.00982503!10760-110E4;0.819766!10709-109H7;0.947785!10710-109H8;0.259969!10703-109H1;0.0916503!10719-109I8;0.908257!10642-109A3;0.741678!10177-103C6;0.390364!10164-103B2;0.0688971!10173-103C2;0.03802!10166-103B4;0.0979286!10083-102B2;0.0768492!10188-103D8;0.0276412!10552-107I3;0.0228985!10553-107I4;0.226823!10013-101C4;0.261635!10536-107G5;0.532677!10618-108G6;0.0951057!10423-106C9;0.430932!10785-110H2;0.11264!12238-129G6;0.0652384!12239-129G7;0.259849!12240-129G8;0.49353!10416-106C2;0.20821!10801-110I9;0.887585!10766-110F1;0.320025!10824-111C5;0.169612!10825-111C6;0.184293!10826-111C7;0.191062!10454-106G4;0.112663!10409-106B4;0.190062!10638-108I8;0.0609901!10636-108I6;0.0575802!10513-107D9;0.136743!10420-106C6;0.255279!10082-102B1;0.57392!10014-101C5;0.252155!10070-101I7;0.540721!10452-106G2;0.389346!10453-106G3;0.0443855!10449-106F8;0.0803032!10042-101F6;0.156281!10069-101I6;0.0615049!10193-103E4;0.270557!10631-108I1;0.0198557!10438-106E6;0.45901!10488-107B2;0.168177!10196-103E7;0.136269!10071-101I8;0.522805!10071-101I8;0.131048!10041-101F5;0.0759746!10451-106G1;0.31092!10450-106F9;0.394746!10604-108F1;0.887633!10605-108F2;0.0983126!10606-108F3;0.0436399!10603-108E9;0.0809071!10497-107C2;0.128939!10448-106F7;0.27261!10643-109A4;0.0243169!10426-106D3;0.196319!10431-106D8;0.0785723!10197-103E8;0.423675!10443-106F2;0.28743!10815-111B5;0.0496209!10816-111B6;0.0870425!10817-111B7;0.0340569!10015-101C6;0.092529!10410-106B5;0.581511!10054-101G9;0.266017!10758-110E2;0.145325!10711-109H9;0.439999!10040-101F4;0.456946!10470-106I2;0.0293461!10415-106C1;0.126684!10198-103E9;0.0463708!10614-108G2;0.485357!10612-108F9;0.653506!10549-107H9;0.0269514!10615-108G3;0.322091!10487-107B1;0.05005!10433-106E1;0.0396359!10688-109F4;0.0215701!10444-106F3;0.077988!10444-106F3;0.025806!10485-107A8;0.013223!10413-106B8;0.929022!10175-103C4;0.397717!10161-103A8;0.0296065!12131-128D7;0.0472432!10624-108H3;0.154164!10712-109I1;0.62804!10205-103F7;0.0979657!10206-103F8;0.273427!10207-103F9;0.187024!10050-101G5;0.649794!10051-101G6;0.364155!10016-101C7;0.351222!10046-101G1;0.418251!10778-110G4;0.353763!10633-108I3;0.452692!10818-111B8;0.274404!10819-111B9;0.114849!10820-111C1;0.106352!10484-107A7;0.101993!10808-111A7;0.0930626!10169-103B7;0.335913!10153-102I9;0.0463079!13425-144D5;0.0512505!13433-144E4;0.99658!13437-144E8;0.691289!11904-125F5;0.929534!11905-125F6;0.00986383!10039-101F3;0.0371648!10791-110H8;0.0299365!10017-101C8;0.371739!10045-101F9;0.304618!10509-107D5;0.410148!10839-111E2;0.0220386!10692-109F8;0.248071!10079-102A7;0.232309!10078-102A6;0.144751!10721-110A1;0.232239!10569-108B2;0.382477!10570-108B3;0.0180012!10571-108B4;0.00805484!10647-109A8;0.0161423!10752-110D5;0.669616!10782-110G8;0.0738026!10726-110A6;0.786202!10018-101C9;0.869779!10086-102B5;0.495173!10182-103D2;0.357809!10165-103B3;0.0325856!10499-107C4;0.0443088!10408-106B3;0.166145!10019-101D1;0.208858!10068-101I5;0.871336!10075-102A3;0.710998!10077-102A5;0.592179!10727-110A7;0.724168!10775-110G1;0.118758!10412-106B7;0.604351!12231-129F8;0.152338!12232-129F9;0.679347!12233-129G1;0.892137!12234-129G2;0.844767!10414-106B9;0.412242!10170-103B8;0.0399311!10183-103D3;0.0458902!10150-102I6;0.0272562!10174-103C3;0.0343782!10155-103A2;0.0576529!10038-101F2;0.0689018!10838-111E1;0.0499361!10759-110E3;0.176042!10514-107E1;0.97502!10465-106H6;0.132554!10691-109F7;0.590748!10843-111E6;0.839357!10844-111E7;0.249467!11747-123G1;0.837725!11748-123G2;0.443073!11749-123G3;0.670291!11750-123G4;0.450055!11751-123G5;0.325324!11840-124H4;0.471219!11752-123G6;0.29486!11753-123G7;0.319695!11754-123G8;0.25877!11755-123G9;0.285845!11756-123H1;0.427036!11833-124G6;0.124063!11760-123H5;0.630072!11836-124G9;0.22585!11758-123H3;0.198721!11835-124G8;0.0669861!11762-123H7;0.0992813!11838-124H2;0.823617!11757-123H2;0.0603802!11759-123H4;0.0372398!11761-123H6;0.341984!11842-124H6;0.122391!11837-124H1;0.157858!10568-108B1;0.120548!13230-141I8;0.391171!13231-141I9;0.139172!10696-109G3;0.108554!10493-107B7;0.79236!10494-107B8;0.0722835!10850-111F4;0.397259!10851-111F5;0.968659!10852-111F6;0.648225!10853-111F7;0.986255!10854-111F8;0.486916!10855-111F9;0.599912!10856-111G1;0.0341484!10847-111F1;0.756868!10846-111E9;0.235718!10848-111F2;0.847827!10845-111E8;0.930362!10857-111G2;0.28303!10858-111G3;0.698261!10156-103A3;0.927642!11901-125F2;0.0366979!11902-125F3;0.00182862!11903-125F4;0.0108839!10689-109F5;0.0182326!10648-109A9;0.518174!10784-110H1;0.209406!10744-110C6;0.0316373!10772-110F7;0.219985!10474-106I6;0.26964!10600-108E6;0.0313065!10684-109E9;0.901525!12226-129F3;0.370701!12227-129F4;0.142219!10508-107D4;0.411962!10539-107G8;0.482579!10607-108F4;0.606819!10555-107I6;0.89769!10774-110F9;0.453991!10637-108I7;0.766288!10663-109C6;0.514314!10728-110A8;0.0792913!10729-110A9;0.172578!10430-106D7;0.105677!10730-110B1;0.0661531!10813-111B3;0.679342!10812-111B2;0.175243!10037-101F1;0.18585!10172-103C1;0.0308039!10163-103B1;0.0375189!10076-102A4;0.0387553!10073-102A1;0.011749!10036-101E9;0.0611492!10195-103E6;0.0113397!10277-104E7;0.027932!10434-106E2;0.0521019!10550-107I1;0.113063!10545-107H5;0.293443!10544-107H4;0.26721!10704-109H2;0.287985!10510-107D6;0.824985!10558-107I9;0.933857!10020-101D2;0.624591!10732-110B3;0.705233!10049-101G4;0.881134!10698-109G5;0.231507!10437-106E5;0.0484045!10417-106C3;0.799404!10035-101E8;0.0214464!10171-103B9;0.0180415!10157-103A4;0.0304508!10034-101E7;0.0351539!10072-101I9;0.0227731!10199-103F1;0.0986066!10200-103F2;0.432998!10697-109G4;0.337914!10723-110A3;0.865645!10179-103C8;0.628405!10160-103A7;0.300556!10180-103C9;0.287624!10162-103A9;0.357766!10021-101D3;0.340829!10840-111E3;0.700018!10706-109H4;0.059457!10033-101E6;0.23227!10032-101E5;0.0229222!10490-107B4;0.018447!10439-106E7;0.213186!10022-101D4;0.701982!10176-103C5;0.490867!10469-106I1;0.0495885!10067-101I4;0.0371698!10411-106B6;0.0882664!10471-106I3;0.733688!10030-101E3;0.0979112!10475-106I7;0.17537!10787-110H4;0.696978!10477-106I9;0.112934!10695-109G2;0.380878!11771-123I7;0.513469!11772-123I8;0.779456!11773-123I9;0.631223!10093-102C3;0.620189!10442-106F1;0.451595!10442-106F1;0.929076!10201-103F3;0.926347!10639-108I9;0.417012!11843-124H7;0.0989957!11841-124H5;0.47908!10693-109F9;0.585085!10436-106E4;0.185145!10483-107A6;0.0282433!10282-104F3;0.095512!10023-101D5;0.855441!10066-101I3;0.859188!10065-101I2;0.208462!10800-110I8;0.357734!10610-108F7;0.380302!10841-111E4;0.426682!10541-107H1;0.464706!10842-111E5;0.116609!10562-108A4;0.819955!10024-101D6;0.964558!10064-101I1;0.912672!10609-108F6;0.17791!10048-101G3;0.894883!10781-110G7;0.503015!10181-103D1;0.272525!10159-103A6;0.0615918!10056-101H2;0.086476!10737-110B8;0.0392849!10025-101D7;0.33823!10044-101F8;0.756798!10424-106D1;0.865214!10463-106H4;0.0550152!10616-108G4;0.0341903!10486-107A9;0.191226!10062-101H8;0.0198471!10202-103F4;0.61357!10158-103A5;0.752002!10441-106E9;0.05852!10031-101E4;0.991585!10063-101H9;0.0160352!10063-101H9;0.0835834!11763-123H8;0.240317!11765-123I1;0.213926!11768-123I4;0.247596!10807-111A6;0.0873653!10790-110H7;0.587397!10798-110I6;0.614618!10786-110H3;0.200438!10591-108D6;0.236677!10593-108D8;0.385091!10590-108D5;0.349151!10026-101D8;0.18474!10096-102C6;0.691742!10168-103B6;0.73259!10154-103A1;0.034569!10209-103G2;0.0532505!10061-101H7;0.495978!10027-101D9;0.277928!10043-101F7;0.10329!10783-110G9;0.288111!10028-101E1;0.718629!10060-101H6;0.810078!10203-103F5;0.562071!10059-101H5;0.498634!10047-101G2;0.483195!10029-101E2;0.929001!10058-101H4;0.719868!10418-106C4;0.184092!10492-107B6;0.278839!10694-109G1;0.35196!10797-110I5;0.624136!10057-101H3;0.115094!10100-102D1;0.464516!10055-101H1;0.418782!10204-103F6;0.255063!10191-103E2;0.563943!10563-108A5;0.238811
|name=motif_CNGCAT
|name=motif_CNGCAT
|tomtom_result=twi#MA0249.1;0;0.00945334;4.49979;1;6;CAGCAT;TCGCATATGTTG;+!PHD1#MA0355.1;2;0.0185391;8.82459;1;6;CAGCAT;ACCTGCAGCA;+!SOK2#MA0385.1;3;0.020307;9.66614;1;6;CAGCAT;TGCCTGCAGGT;-
}}
}}

Latest revision as of 12:53, 7 September 2012

Full Name: motif_CNGCAT

Motif matrix
POACGT
010283200
02708708708708
030028320
040283200
052832000
060002832

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
twi#MA0249.100.009453344.4997916CAGCATTCGCATATGTTG+
PHD1#MA0355.120.01853918.8245916CAGCATACCTGCAGCA+
SOK2#MA0385.130.0203079.6661416CAGCATTGCCTGCAGGT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_CNGCAT&oldid=2133808"