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MacroAPE 1083:Motif CNCAGT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;96400;0;0!02;24100;24100;24100;24100!03;0;96400;0;0!04;96400;0;0;0!05;0;0;96400;0!06;0;0;0;96400 |macroape_1083_sample_pvalues=11376-118...")
 
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3!10788-110H5;0.145156!10792-110H9;0.803931!10765-110E9;0.395986!10829-111D1;0.480145!10830-111D2;0.553541!10831-111D3;0.572037!10832-111D4;0.215294!10833-111D5;0.41962!10764-110E8;0.402698!10770-110F5;0.153137!10399-106A3;0.591382!10400-106A4;0.746218!10405-106A9;0.78083!10834-111D6;0.861684!10835-111D7;0.400692!10836-111D8;0.782294!10837-111D9;0.921721!10699-109G6;0.458548!10802-111A1;0.743226!10796-110I4;0.589196!10010-101C1;0.768694!10810-111A9;0.859792!10421-106C7;0.574781!10708-109H6;0.182213!12235-129G3;0.931577!12236-129G4;0.81549!12237-129G5;0.726126!10167-103B5;0.661693!10151-102I7;0.144411!10428-106D5;0.162304!10795-110I3;0.981723!10805-111A4;0.465641!10052-101G7;0.904591!10189-103D9;0.990154!10589-108D4;0.8638!10425-106D2;0.926151!10427-106D4;0.206241!10702-109G9;0.482861!10432-106D9;0.671681!10496-107C1;0.653253!10718-109I7;0.327029!10011-101C2;0.285065!10053-101G8;0.583488!10686-109F2;0.412101!10084-102B3;0.948773!10012-101C3;0.291613!10085-102B4;0.149634!10482-107A5;0.270012!10419-106C5;0.684205!10080-102A8;0.518228!10760-110E4;0.970235!10709-109H7;0.363035!10710-109H8;0.612788!10703-109H1;0.516922!10719-109I8;0.70701!10642-109A3;0.0863514!10177-103C6;0.910928!10164-103B2;0.17774!10173-103C2;0.14746!10166-103B4;0.0850567!10083-102B2;0.13355!10188-103D8;0.217947!10552-107I3;0.179923!10553-107I4;0.439823!10013-101C4;0.704108!10536-107G5;0.915854!10618-108G6;0.522719!10423-106C9;0.928429!10785-110H2;0.887722!12238-129G6;0.589835!12239-129G7;0.649366!12240-129G8;0.787928!10416-106C2;0.779146!10801-110I9;0.233213!10766-110F1;0.244046!10824-111C5;0.44327!10825-111C6;0.855728!10826-111C7;0.936767!10454-106G4;0.886386!10409-106B4;0.888926!10638-108I8;0.620987!10636-108I6;0.473502!10513-107D9;0.552826!10420-106C6;0.704262!10082-102B1;0.883718!10014-101C5;0.876468!10070-101I7;0.902802!10452-106G2;0.746944!10453-106G3;0.635197!10449-106F8;0.534597!10042-101F6;0.553198!10069-101I6;0.318352!10193-103E4;0.77437!10631-108I1;0.21632!10438-106E6;0.56463!10488-107B2;0.545802!10196-103E7;0.782502!10071-101I8;0.70298!10071-101I8;0.693854!10041-101F5;0.215488!10451-106G1;0.792884!10450-106F9;0.628408!10604-108F1;0.862147!10605-108F2;0.878296!10606-108F3;0.933315!10603-108E9;0.920519!10497-107C2;0.690547!10448-106F7;0.991317!10643-109A4;0.934961!10426-106D3;0.98089!10431-106D8;0.937711!10197-103E8;0.787309!10443-106F2;0.715567!10815-111B5;0.144454!10816-111B6;0.601247!10817-111B7;0.618265!10015-101C6;0.674251!10410-106B5;0.852681!10054-101G9;0.341063!10758-110E2;0.793556!10711-109H9;0.536261!10040-101F4;0.431892!10470-106I2;0.135273!10415-106C1;0.681603!10198-103E9;0.96627!10614-108G2;0.797577!10612-108F9;0.890573!10549-107H9;0.541127!10615-108G3;0.784977!10487-107B1;0.791847!10433-106E1;0.820231!10688-109F4;0.97481!10444-106F3;0.540427!10444-106F3;0.480246!10485-107A8;0.346084!10413-106B8;0.610197!10175-103C4;0.942022!10161-103A8;0.225823!12131-128D7;0.25699!10624-108H3;0.501526!10712-109I1;0.776772!10205-103F7;0.303831!10206-103F8;0.910452!10207-103F9;0.966724!10050-101G5;0.988335!10051-101G6;0.506608!10016-101C7;0.730357!10046-101G1;0.9858!10778-110G4;0.954296!10633-108I3;0.443002!10818-111B8;0.665137!10819-111B9;0.972136!10820-111C1;0.983443!10484-107A7;0.991522!10808-111A7;0.589561!10169-103B7;0.205848!10153-102I9;0.10233!13425-144D5;0.182171!13433-144E4;0.869962!13437-144E8;0.907018!11904-125F5;0.885477!11905-125F6;0.710309!10039-101F3;0.928238!10791-110H8;0.143715!10017-101C8;0.573503!10045-101F9;0.733819!10509-107D5;0.551541!10839-111E2;0.833453!10692-109F8;0.702429!10079-102A7;0.779174!10078-102A6;0.702962!10721-110A1;0.690269!10569-108B2;0.555685!10570-108B3;0.643461!10571-108B4;0.094481!10647-109A8;0.69357!10752-110D5;0.279351!10782-110G8;0.619148!10726-110A6;0.302151!10018-101C9;0.897619!10086-102B5;0.85975!10182-103D2;0.39003!10165-103B3;0.12486!10499-107C4;0.207668!10408-106B3;0.530891!10019-101D1;0.869875!10068-101I5;0.936967!10075-102A3;0.742357!10077-102A5;0.648042!10727-110A7;0.448247!10775-110G1;0.198004!10412-106B7;0.579441!12231-129F8;0.261158!12232-129F9;0.210618!12233-129G1;0.231224!12234-129G2;0.222331!10414-106B9;0.321051!10170-103B8;0.985976!10183-103D3;0.118821!10150-102I6;0.117147!10174-103C3;0.143505!10155-103A2;0.292209!10038-101F2;0.313778!10838-111E1;0.241116!10759-110E3;0.508946!10514-107E1;0.678724!10465-106H6;0.995896!10691-109F7;0.990376!10843-111E6;0.518552!10844-111E7;0.798596!11747-123G1;0.75212!11748-123G2;0.753638!11749-123G3;0.894366!11750-123G4;0.52831!11751-123G5;0.795523!11840-124H4;0.695131!11752-123G6;0.722819!11753-123G7;0.834249!11754-123G8;0.631866!11755-123G9;0.992104!11756-123H1;0.982386!11833-124G6;0.593107!11760-123H5;0.826305!11836-124G9;0.689312!11758-123H3;0.65838!11835-124G8;0.618118!11762-123H7;0.619368!11838-124H2;0.421405!11757-123H2;0.583388!11759-123H4;0.656794!11761-123H6;0.939716!11842-124H6;0.707083!11837-124H1;0.189152!10568-108B1;0.496216!13230-141I8;0.957089!13231-141I9;0.992375!10696-109G3;0.773574!10493-107B7;0.0373106!10494-107B8;0.487227!10850-111F4;0.203385!10851-111F5;0.298202!10852-111F6;0.885827!10853-111F7;0.888272!10854-111F8;0.422725!10855-111F9;0.364349!10856-111G1;0.768938!10847-111F1;0.261791!10846-111E9;0.720876!10848-111F2;0.397054!10845-111E8;0.638374!10857-111G2;0.863005!10858-111G3;0.920159!10156-103A3;0.899079!11901-125F2;0.155414!11902-125F3;0.695797!11903-125F4;0.840715!10689-109F5;0.860733!10648-109A9;0.689244!10784-110H1;0.657281!10744-110C6;0.449518!10772-110F7;0.220004!10474-106I6;0.601769!10600-108E6;0.375685!10684-109E9;0.439528!12226-129F3;0.524722!12227-129F4;0.756792!10508-107D4;0.68171!10539-107G8;0.388101!10607-108F4;0.632612!10555-107I6;0.630804!10774-110F9;0.54941!10637-108I7;0.839027!10663-109C6;0.283184!10728-110A8;0.146281!10729-110A9;0.392504!10430-106D7;0.815827!10730-110B1;0.488615!10813-111B3;0.951339!10812-111B2;0.738113!10037-101F1;0.222096!10172-103C1;0.164056!10163-103B1;0.0914289!10076-102A4;0.197858!10073-102A1;0.189082!10036-101E9;0.190793!10195-103E6;0.142375!10277-104E7;0.149828!10434-106E2;0.258212!10550-107I1;0.71939!10545-107H5;0.883101!10544-107H4;0.460042!10704-109H2;0.369627!10510-107D6;0.804746!10558-107I9;0.920519!10020-101D2;0.804925!10732-110B3;0.668713!10049-101G4;0.638788!10698-109G5;0.66304!10437-106E5;0.817669!10417-106C3;0.277586!10035-101E8;0.637588!10171-103B9;0.131466!10157-103A4;0.118476!10034-101E7;0.113359!10072-101I9;0.127967!10199-103F1;0.21248!10200-103F2;0.488438!10697-109G4;0.838134!10723-110A3;0.0782429!10179-103C8;0.553381!10160-103A7;0.335267!10180-103C9;0.363623!10162-103A9;0.43299!10021-101D3;0.321917!10840-111E3;0.979065!10706-109H4;0.362398!10033-101E6;0.735171!10032-101E5;0.102925!10490-107B4;0.152539!10439-106E7;0.900645!10022-101D4;0.768063!10176-103C5;0.841221!10469-106I1;0.15578!10067-101I4;0.73074!10411-106B6;0.91847!10471-106I3;0.447367!10030-101E3;0.723675!10475-106I7;0.51055!10787-110H4;0.824044!10477-106I9;0.638019!10695-109G2;0.610593!11771-123I7;0.757958!11772-123I8;0.740826!11773-123I9;0.531687!10093-102C3;0.269449!10442-106F1;0.690809!10442-106F1;0.488205!10201-103F3;0.370428!10639-108I9;0.751483!11843-124H7;0.522225!11841-124H5;0.911139!10693-109F9;0.769794!10436-106E4;0.7136!10483-107A6;0.655909!10282-104F3;0.551849!10023-101D5;0.794941!10066-101I3;0.788204!10065-101I2;0.859208!10800-110I8;0.71146!10610-108F7;0.755569!10841-111E4;0.471548!10541-107H1;0.492285!10842-111E5;0.465891!10562-108A4;0.494377!10024-101D6;0.834553!10064-101I1;0.880414!10609-108F6;0.649857!10048-101G3;0.770455!10781-110G7;0.677644!10181-103D1;0.729196!10159-103A6;0.233254!10056-101H2;0.295169!10737-110B8;0.373085!10025-101D7;0.866648!10044-101F8;0.887821!10424-106D1;0.887853!10463-106H4;0.461189!10616-108G4;0.355033!10486-107A9;0.210308!10062-101H8;0.956692!10202-103F4;0.954581!10158-103A5;0.511828!10441-106E9;0.390143!10031-101E4;0.667057!10063-101H9;0.177842!10063-101H9;0.201582!11763-123H8;0.98332!11765-123I1;0.907729!11768-123I4;0.665287!10807-111A6;0.634996!10790-110H7;0.970757!10798-110I6;0.83305!10786-110H3;0.238917!10591-108D6;0.816325!10593-108D8;0.759419!10590-108D5;0.970919!10026-101D8;0.93747!10096-102C6;0.516121!10168-103B6;0.52425!10154-103A1;0.142781!10209-103G2;0.264879!10061-101H7;0.704818!10027-101D9;0.770195!10043-101F7;0.7228!10783-110G9;0.940457!10028-101E1;0.285054!10060-101H6;0.965516!10203-103F5;0.80289!10059-101H5;0.725589!10047-101G2;0.663691!10029-101E2;0.597246!10058-101H4;0.740736!10418-106C4;0.769587!10492-107B6;0.687295!10694-109G1;0.977548!10797-110I5;0.807553!10057-101H3;0.414494!10100-102D1;0.91259!10055-101H1;0.735135!10204-103F6;0.990935!10191-103E2;0.660451!10563-108A5;0.61619
|name=motif_CNCAGT
|name=motif_CNCAGT
|tomtom_result=MET4#MA0335.1;1;0.00255967;1.2184;1;6;CACAGT;CCACAGTT;-!odd#MA0454.1;0;0.00810835;3.85958;1;6;CACAGT;AACAGTAGCAG;+!MET28#MA0332.1;1;0.0123569;5.88189;1;5;CACAGT;CCACAG;-!FOXC1#MA0032.1;1;0.0173765;8.27123;1;6;CACAGT;GGTAAGTA;+
}}
}}

Latest revision as of 12:21, 7 September 2012

Full Name: motif_CNCAGT

Motif matrix
POACGT
0109640000
0224100241002410024100
0309640000
0496400000
0500964000
0600096400

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
MET4#MA0335.110.002559671.218416CACAGTCCACAGTT-
odd#MA0454.100.008108353.8595816CACAGTAACAGTAGCAG+
MET28#MA0332.110.01235695.8818915CACAGTCCACAG-
FOXC1#MA0032.110.01737658.2712316CACAGTGGTAAGTA+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_CNCAGT&oldid=2133622"