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MacroAPE 1083:TF7L2 f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;449.90447840737215;269.3764373740038;387.1451757333594;173.63345636581738!2;726.7138451822626;153.33234232565107;285.66903981897843;114.3443...")
 
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34-107G3;0.068353!10429-106D6;0.0157839!10464-106H5;0.688272!10827-111C8;0.215504!10789-110H6;0.00509124!10828-111C9;0.0304711!10788-110H5;0.255837!10792-110H9;0.0747154!10765-110E9;0.00266964!10829-111D1;0.0167642!10830-111D2;0.0416068!10831-111D3;0.00936532!10832-111D4;0.0145608!10833-111D5;0.0506645!10764-110E8;0.0129657!10770-110F5;0.0407126!10399-106A3;0.0477942!10400-106A4;0.0409241!10405-106A9;0.0394473!10834-111D6;0.0408361!10835-111D7;0.0739585!10836-111D8;0.103323!10837-111D9;0.000524829!10699-109G6;0.0228207!10802-111A1;0.09725!10796-110I4;0.0161499!10010-101C1;0.806184!10810-111A9;0.957885!10421-106C7;0.681251!10708-109H6;0.11471!12235-129G3;0.311273!12236-129G4;0.128863!12237-129G5;0.0892527!10167-103B5;0.606316!10151-102I7;0.226925!10428-106D5;0.197661!10795-110I3;0.125903!10805-111A4;0.109523!10052-101G7;0.434373!10189-103D9;0.607972!10589-108D4;0.679508!10425-106D2;0.90271!10427-106D4;0.527878!10702-109G9;0.0576424!10432-106D9;0.829006!10496-107C1;0.209553!10718-109I7;0.589437!10011-101C2;0.0141345!10053-101G8;0.835688!10686-109F2;0.119677!10084-102B3;0.97241!10012-101C3;0.0493774!10085-102B4;0.157332!10482-107A5;0.0425639!10419-106C5;0.960528!10080-102A8;0.905472!10760-110E4;0.334114!10709-109H7;0.533113!10710-109H8;0.668919!10703-109H1;0.260949!10719-109I8;0.86188!10642-109A3;0.792792!10177-103C6;0.614687!10164-103B2;0.132646!10173-103C2;0.208887!10166-103B4;0.534572!10083-102B2;0.496742!10188-103D8;0.221829!10552-107I3;0.203194!10553-107I4;0.808546!10013-101C4;0.320341!10536-107G5;0.213037!10618-108G6;0.00878502!10423-106C9;0.54473!10785-110H2;0.677657!12238-129G6;0.405423!12239-129G7;0.165042!12240-129G8;0.152845!10416-106C2;0.597108!10801-110I9;0.182522!10766-110F1;0.0546986!10824-111C5;0.0218236!10825-111C6;0.0761163!10826-111C7;0.0547863!10454-106G4;0.0695287!10409-106B4;0.110154!10638-108I8;0.0262571!10636-108I6;0.266275!10513-107D9;0.924993!10420-106C6;0.112441!10082-102B1;0.309865!10014-101C5;0.129361!10070-101I7;0.474107!10452-106G2;0.313258!10453-106G3;0.592577!10449-106F8;0.986905!10042-101F6;0.928938!10069-101I6;0.0897933!10193-103E4;0.850808!10631-108I1;0.121821!10438-106E6;0.122014!10488-107B2;0.52615!10196-103E7;0.819606!10071-101I8;0.745128!10071-101I8;0.318047!10041-101F5;0.0750683!10451-106G1;0.617814!10450-106F9;0.624619!10604-108F1;0.909131!10605-108F2;0.557611!10606-108F3;0.148464!10603-108E9;0.305691!10497-107C2;0.236556!10448-106F7;0.987481!10643-109A4;0.909233!10426-106D3;0.633705!10431-106D8;0.802447!10197-103E8;0.81482!10443-106F2;0.362275!10815-111B5;0.0488098!10816-111B6;0.72607!10817-111B7;0.834148!10015-101C6;0.741049!10410-106B5;0.325721!10054-101G9;0.953578!10758-110E2;0.266938!10711-109H9;0.582922!10040-101F4;0.28078!10470-106I2;0.164895!10415-106C1;0.790791!10198-103E9;0.457181!10614-108G2;0.22671!10612-108F9;0.755255!10549-107H9;0.855587!10615-108G3;0.0650686!10487-107B1;0.797248!10433-106E1;0.374726!10688-109F4;0.203735!10444-106F3;0.887089!10444-106F3;0.508991!10485-107A8;0.563478!10413-106B8;0.76657!10175-103C4;0.992308!10161-103A8;0.161987!12131-128D7;0.262418!10624-108H3;0.00688097!10712-109I1;0.140392!10205-103F7;0.930315!10206-103F8;0.706199!10207-103F9;0.798127!10050-101G5;0.969219!10051-101G6;0.428998!10016-101C7;0.814397!10046-101G1;0.60109!10778-110G4;0.285463!10633-108I3;0.865064!10818-111B8;0.0117452!10819-111B9;0.146342!10820-111C1;0.152512!10484-107A7;0.138079!10808-111A7;0.126102!10169-103B7;0.098924!10153-102I9;0.357765!13425-144D5;0.210883!13433-144E4;0.0400889!13437-144E8;0.303478!11904-125F5;0.482499!11905-125F6;0.401446!10039-101F3;0.3781!10791-110H8;0.0997522!10017-101C8;0.900425!10045-101F9;0.742199!10509-107D5;0.285071!10839-111E2;0.401793!10692-109F8;0.389308!10079-102A7;0.492776!10078-102A6;0.946417!10721-110A1;0.615141!10569-108B2;0.491076!10570-108B3;0.760259!10571-108B4;0.664045!10647-109A8;0.794605!10752-110D5;0.56877!10782-110G8;0.0278956!10726-110A6;0.137364!10018-101C9;0.377048!10086-102B5;0.427921!10182-103D2;0.612078!10165-103B3;0.172403!10499-107C4;0.306705!10408-106B3;0.845856!10019-101D1;0.427305!10068-101I5;0.476804!10075-102A3;0.210398!10077-102A5;0.704529!10727-110A7;0.976584!10775-110G1;0.0935432!10412-106B7;0.0214265!12231-129F8;0.758453!12232-129F9;0.209898!12233-129G1;0.232464!12234-129G2;0.0745184!10414-106B9;0.0568808!10170-103B8;0.00466376!10183-103D3;0.28393!10150-102I6;0.195065!10174-103C3;0.248633!10155-103A2;0.235519!10038-101F2;0.250884!10838-111E1;0.107635!10759-110E3;0.718299!10514-107E1;0.220067!10465-106H6;0.448853!10691-109F7;0.490647!10843-111E6;0.749514!10844-111E7;0.987683!11747-123G1;0.380185!11748-123G2;0.846216!11749-123G3;0.660477!11750-123G4;0.654954!11751-123G5;0.707387!11840-124H4;0.656774!11752-123G6;0.612889!11753-123G7;0.15462!11754-123G8;0.961233!11755-123G9;0.782628!11756-123H1;0.962711!11833-124G6;0.274178!11760-123H5;0.666811!11836-124G9;0.700738!11758-123H3;0.660931!11835-124G8;0.697424!11762-123H7;0.358559!11838-124H2;0.938915!11757-123H2;0.594854!11759-123H4;0.416985!11761-123H6;0.762734!11842-124H6;0.237699!11837-124H1;0.611707!10568-108B1;0.660624!13230-141I8;0.339628!13231-141I9;0.943249!10696-109G3;0.838986!10493-107B7;0.85995!10494-107B8;0.138708!10850-111F4;0.7538!10851-111F5;0.407561!10852-111F6;0.471726!10853-111F7;0.765596!10854-111F8;0.0850421!10855-111F9;0.812324!10856-111G1;0.114954!10847-111F1;0.77603!10846-111E9;0.881462!10848-111F2;0.683346!10845-111E8;0.981601!10857-111G2;0.776854!10858-111G3;0.607176!10156-103A3;0.751381!11901-125F2;0.23723!11902-125F3;0.216169!11903-125F4;0.259359!10689-109F5;0.330796!10648-109A9;0.278932!10784-110H1;0.189692!10744-110C6;0.840325!10772-110F7;0.588376!10474-106I6;0.0547384!10600-108E6;0.114721!10684-109E9;0.642546!12226-129F3;0.593345!12227-129F4;0.948577!10508-107D4;0.156384!10539-107G8;0.186277!10607-108F4;0.0773436!10555-107I6;0.659464!10774-110F9;0.329305!10637-108I7;0.292933!10663-109C6;0.771879!10728-110A8;0.56356!10729-110A9;0.944349!10430-106D7;0.552494!10730-110B1;0.454874!10813-111B3;0.846738!10812-111B2;0.888458!10037-101F1;0.433156!10172-103C1;0.124597!10163-103B1;0.253093!10076-102A4;0.241485!10073-102A1;0.133321!10036-101E9;0.0933619!10195-103E6;0.0521676!10277-104E7;0.165168!10434-106E2;0.0242501!10550-107I1;0.297156!10545-107H5;0.952429!10544-107H4;0.932338!10704-109H2;0.358027!10510-107D6;0.911476!10558-107I9;0.0583448!10020-101D2;0.407278!10732-110B3;0.417028!10049-101G4;0.268381!10698-109G5;0.129459!10437-106E5;0.779743!10417-106C3;0.978063!10035-101E8;0.0177673!10171-103B9;0.095288!10157-103A4;0.137193!10034-101E7;0.270592!10072-101I9;0.0871944!10199-103F1;0.0476148!10200-103F2;0.61296!10697-109G4;0.466742!10723-110A3;0.541846!10179-103C8;0.890912!10160-103A7;0.288036!10180-103C9;0.365462!10162-103A9;0.933933!10021-101D3;0.997014!10840-111E3;0.310661!10706-109H4;0.0393255!10033-101E6;0.29194!10032-101E5;0.129626!10490-107B4;0.077078!10439-106E7;0.396602!10022-101D4;0.433539!10176-103C5;0.554984!10469-106I1;0.227557!10067-101I4;0.252465!10411-106B6;0.229008!10471-106I3;0.953107!10030-101E3;0.039947!10475-106I7;0.112053!10787-110H4;0.42182!10477-106I9;0.256199!10695-109G2;0.157384!11771-123I7;0.766308!11772-123I8;0.989951!11773-123I9;0.646781!10093-102C3;0.548971!10442-106F1;0.476249!10442-106F1;0.0257216!10201-103F3;0.0716716!10639-108I9;0.982679!11843-124H7;0.0581254!11841-124H5;0.485999!10693-109F9;0.759643!10436-106E4;0.784118!10483-107A6;0.139254!10282-104F3;0.375142!10023-101D5;0.3644!10066-101I3;0.804855!10065-101I2;0.268508!10800-110I8;0.344021!10610-108F7;0.844674!10841-111E4;0.000884785!10541-107H1;0.321609!10842-111E5;0.00161228!10562-108A4;0.559622!10024-101D6;0.570057!10064-101I1;0.505933!10609-108F6;0.402668!10048-101G3;0.554571!10781-110G7;0.77463!10181-103D1;0.691046!10159-103A6;0.296381!10056-101H2;0.503913!10737-110B8;0.157302!10025-101D7;0.947033!10044-101F8;0.92692!10424-106D1;0.678786!10463-106H4;0.137632!10616-108G4;0.769851!10486-107A9;0.589285!10062-101H8;0.493184!10202-103F4;0.50248!10158-103A5;0.423566!10441-106E9;0.328691!10031-101E4;0.0418408!10063-101H9;0.064496!10063-101H9;0.0770644!11763-123H8;0.285791!11765-123I1;0.852914!11768-123I4;0.770183!10807-111A6;0.695291!10790-110H7;0.0281853!10798-110I6;0.227257!10786-110H3;0.0217274!10591-108D6;0.0986631!10593-108D8;0.151251!10590-108D5;0.106538!10026-101D8;0.823061!10096-102C6;0.718075!10168-103B6;0.157239!10154-103A1;0.187857!10209-103G2;0.219062!10061-101H7;0.402151!10027-101D9;0.5013!10043-101F7;0.560706!10783-110G9;0.494704!10028-101E1;0.917358!10060-101H6;0.661801!10203-103F5;0.948672!10059-101H5;0.107126!10047-101G2;0.166836!10029-101E2;0.325156!10058-101H4;0.37164!10418-106C4;0.552928!10492-107B6;0.107789!10694-109G1;0.271655!10797-110I5;0.289025!10057-101H3;0.666011!10100-102D1;0.637951!10055-101H1;0.173997!10204-103F6;0.155088!10191-103E2;0.881541!10563-108A5;0.721762
|name=TF7L2_f1
|name=TF7L2_f1
|tomtom_result=pan#MA0237.1;-2;3.59747e-05;0.0171239;0.0341307;8;AAGATCAAAGGG;GATCAAAG;-!HNF4A#MA0114.1;-1;0.000672907;0.320304;0.304012;11;AAGATCAAAGGG;AGGCCAAAGGTCA;+!D#MA00445.1;-1;0.000961309;0.457583;0.304012;11;AAGATCAAAGGG;AGAACAATGGA;-!NR2F1#MA0017.1;0;0.0019319;0.919585;0.45822;12;AAGATCAAAGGG;AGGTTCAAAGGTCA;-!RME1#MA0370.1;-3;0.00300138;1.42866;0.553421;9;AAGATCAAAGGG;TCCAAAGGAA;+!HMG-I/Y#MA0045.1;-2;0.00374594;1.78307;0.553421;10;AAGATCAAAGGG;CAACAAATGGAAAAAC;+!Sox2#MA0143.1;4;0.00426221;2.02881;0.553421;11;AAGATCAAAGGG;TTTGCATAACAAAGG;-!NR1H2::RXRA#MA0115.1;1;0.00466655;2.22128;0.553421;12;AAGATCAAAGGG;AAAGGTCAAAGGTCAAC;+!ROX1#MA0371.1;0;0.00594864;2.83155;0.576467;12;AAGATCAAAGGG;GAGAACAATGGA;-!ARID3A#MA0151.1;-3;0.00607611;2.89223;0.576467;6;AAGATCAAAGGG;ATTAAA;+!PPARG::RXRA#MA0065.2;1;0.0070383;3.35023;0.607049;12;AAGATCAAAGGG;GTAGGGCAAAGGTCA;+!SOX10#MA0442.1;-4;0.00819455;3.90061;0.63556;6;AAGATCAAAGGG;ACAAAG;-!Dof3#MA0021.1;-6;0.00918187;4.37057;0.63556;6;AAGATCAAAGGG;AAAGCG;+!PPARG::RXRA#MA0065.2;3;0.00969745;4.61598;0.63556;12;AAGATCAAAGGG;CTAGGGGTCAAAGGTCATCG;+!SFL1#MA0377.1;3;0.0104798;4.9884;0.63556;12;AAGATCAAAGGG;TAGAGAATAGAAGAAATAAAA;+!Dof2#MA0020.1;-6;0.0114051;5.42884;0.63556;6;AAGATCAAAGGG;AAAGCA;+!MNB1A#MA0053.1;-6;0.0120581;5.73967;0.63556;5;AAGATCAAAGGG;AAAGC;+!PBF#MA0064.1;-6;0.0120581;5.73967;0.63556;5;AAGATCAAAGGG;AAAGC;+!SOX9#MA0077.1;-2;0.0131683;6.26809;0.657542;9;AAGATCAAAGGG;GAACAATGG;+!exd#MA0222.1;-2;0.0158014;7.52146;0.705408;8;AAGATCAAAGGG;TGTCAAAA;-!TBP#MA0108.2;-1;0.0163574;7.78612;0.705408;11;AAGATCAAAGGG;GTATAAAAGGCGGGG;+!TBP#MA0108.2;-1;0.0163574;7.78612;0.705408;11;AAGATCAAAGGG;GTATAAAAGGCGGGG;+!Gfi#MA0038.1;0;0.0196606;9.35846;0.810996;10;AAGATCAAAGGG;CAAATCACTG;+
}}
}}

Latest revision as of 12:20, 7 September 2012

Full Name: TF7L2_f1

Motif matrix
POACGT
1449.90447840737215269.3764373740038387.1451757333594173.63345636581738
2726.7138451822626153.33234232565107285.66903981897843114.344320553658
3128.43936328556742509.8210401890704556.865948035094484.93319637081864
4853.950770134264937.87001745894876611.855340280800757376.38342000653716
5205.846181608406922.90852342395782879.86568605720281971.439156790983
698.1263913565081047.0766673976837123.7714110671924511.085078059166804
71269.89942238566647.1077820327588110.33011238070026282.72223108142681
81244.683301788407317.85955821962440416.730478192881460.786209679638791
91177.65764303294550.0893057648271243158.0531203098788544.259478772900515
1059.6195717511078726.7279396161179581187.52442280744666.187613705879336
11317.0873076094917313.80021871780576549.63008776623999.54193378701449
12323.8801411656987408.0692763562795426.30318877386503121.80694158470719

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
pan#MA0237.1-23.59747e-050.01712390.03413078AAGATCAAAGGGGATCAAAG-
HNF4A#MA0114.1-10.0006729070.3203040.30401211AAGATCAAAGGGAGGCCAAAGGTCA+
D#MA00445.1-10.0009613090.4575830.30401211AAGATCAAAGGGAGAACAATGGA-
NR2F1#MA0017.100.00193190.9195850.4582212AAGATCAAAGGGAGGTTCAAAGGTCA-
RME1#MA0370.1-30.003001381.428660.5534219AAGATCAAAGGGTCCAAAGGAA+
HMG-I/Y#MA0045.1-20.003745941.783070.55342110AAGATCAAAGGGCAACAAATGGAAAAAC+
Sox2#MA0143.140.004262212.028810.55342111AAGATCAAAGGGTTTGCATAACAAAGG-
NR1H2::RXRA#MA0115.110.004666552.221280.55342112AAGATCAAAGGGAAAGGTCAAAGGTCAAC+
ROX1#MA0371.100.005948642.831550.57646712AAGATCAAAGGGGAGAACAATGGA-
ARID3A#MA0151.1-30.006076112.892230.5764676AAGATCAAAGGGATTAAA+
PPARG::RXRA#MA0065.210.00703833.350230.60704912AAGATCAAAGGGGTAGGGCAAAGGTCA+
SOX10#MA0442.1-40.008194553.900610.635566AAGATCAAAGGGACAAAG-
Dof3#MA0021.1-60.009181874.370570.635566AAGATCAAAGGGAAAGCG+
PPARG::RXRA#MA0065.230.009697454.615980.6355612AAGATCAAAGGGCTAGGGGTCAAAGGTCATCG+
SFL1#MA0377.130.01047984.98840.6355612AAGATCAAAGGGTAGAGAATAGAAGAAATAAAA+
Dof2#MA0020.1-60.01140515.428840.635566AAGATCAAAGGGAAAGCA+
MNB1A#MA0053.1-60.01205815.739670.635565AAGATCAAAGGGAAAGC+
PBF#MA0064.1-60.01205815.739670.635565AAGATCAAAGGGAAAGC+
SOX9#MA0077.1-20.01316836.268090.6575429AAGATCAAAGGGGAACAATGG+
exd#MA0222.1-20.01580147.521460.7054088AAGATCAAAGGGTGTCAAAA-
TBP#MA0108.2-10.01635747.786120.70540811AAGATCAAAGGGGTATAAAAGGCGGGG+
TBP#MA0108.2-10.01635747.786120.70540811AAGATCAAAGGGGTATAAAAGGCGGGG+
Gfi#MA0038.100.01966069.358460.81099610AAGATCAAAGGGCAAATCACTG+
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