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MacroAPE 1083:Motif CCNGCA: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;848;0;0!02;0;848;0;0!03;0;0;0;848!04;0;0;848;0!05;0;848;0;0!06;848;0;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.417848!11327-117E4;...")
 
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9;0.679904!10788-110H5;0.29087!10792-110H9;0.957773!10765-110E9;0.517531!10829-111D1;0.398577!10830-111D2;0.758607!10831-111D3;0.984352!10832-111D4;0.44748!10833-111D5;0.461342!10764-110E8;0.694922!10770-110F5;0.655808!10399-106A3;0.83212!10400-106A4;0.839211!10405-106A9;0.909989!10834-111D6;0.812527!10835-111D7;0.777322!10836-111D8;0.241084!10837-111D9;0.37331!10699-109G6;0.907547!10802-111A1;0.575507!10796-110I4;0.836662!10010-101C1;0.662219!10810-111A9;0.70266!10421-106C7;0.169772!10708-109H6;0.439508!12235-129G3;0.245891!12236-129G4;0.210969!12237-129G5;0.723434!10167-103B5;0.124512!10151-102I7;0.105738!10428-106D5;0.14438!10795-110I3;0.243924!10805-111A4;0.786947!10052-101G7;0.949404!10189-103D9;0.412745!10589-108D4;0.155853!10425-106D2;0.419938!10427-106D4;0.291202!10702-109G9;0.340219!10432-106D9;0.908183!10496-107C1;0.235382!10718-109I7;0.0794379!10011-101C2;0.79336!10053-101G8;0.557868!10686-109F2;0.924027!10084-102B3;0.333372!10012-101C3;0.0570729!10085-102B4;0.0774718!10482-107A5;0.130872!10419-106C5;0.879602!10080-102A8;0.979447!10760-110E4;0.798529!10709-109H7;0.185963!10710-109H8;0.154012!10703-109H1;0.645946!10719-109I8;0.466186!10642-109A3;0.917751!10177-103C6;0.429948!10164-103B2;0.0859586!10173-103C2;0.103216!10166-103B4;0.15614!10083-102B2;0.20002!10188-103D8;0.0950096!10552-107I3;0.116121!10553-107I4;0.615963!10013-101C4;0.271721!10536-107G5;0.354516!10618-108G6;0.250342!10423-106C9;0.151526!10785-110H2;0.124658!12238-129G6;0.145127!12239-129G7;0.734504!12240-129G8;0.75754!10416-106C2;0.491123!10801-110I9;0.632946!10766-110F1;0.967226!10824-111C5;0.964613!10825-111C6;0.367573!10826-111C7;0.373149!10454-106G4;0.297755!10409-106B4;0.347731!10638-108I8;0.564434!10636-108I6;0.0299298!10513-107D9;0.127867!10420-106C6;0.253748!10082-102B1;0.879612!10014-101C5;0.322461!10070-101I7;0.212594!10452-106G2;0.322715!10453-106G3;0.783779!10449-106F8;0.850614!10042-101F6;0.696076!10069-101I6;0.11868!10193-103E4;0.426773!10631-108I1;0.0373432!10438-106E6;0.767495!10488-107B2;0.0659778!10196-103E7;0.167527!10071-101I8;0.248376!10071-101I8;0.0582944!10041-101F5;0.0676529!10451-106G1;0.188255!10450-106F9;0.438112!10604-108F1;0.723547!10605-108F2;0.0622706!10606-108F3;0.0256816!10603-108E9;0.043045!10497-107C2;0.0162377!10448-106F7;0.0247223!10643-109A4;0.0437248!10426-106D3;0.358997!10431-106D8;0.0586664!10197-103E8;0.130811!10443-106F2;0.193619!10815-111B5;0.703793!10816-111B6;0.387578!10817-111B7;0.288273!10015-101C6;0.299144!10410-106B5;0.504778!10054-101G9;0.0779189!10758-110E2;0.0552958!10711-109H9;0.611558!10040-101F4;0.157659!10470-106I2;0.0711582!10415-106C1;0.0563778!10198-103E9;0.108312!10614-108G2;0.157392!10612-108F9;0.992441!10549-107H9;0.168451!10615-108G3;0.206135!10487-107B1;0.662947!10433-106E1;0.369816!10688-109F4;0.0232926!10444-106F3;0.0674538!10444-106F3;0.575788!10485-107A8;0.446535!10413-106B8;0.329584!10175-103C4;0.79343!10161-103A8;0.0744533!12131-128D7;0.143731!10624-108H3;0.40181!10712-109I1;0.702329!10205-103F7;0.218352!10206-103F8;0.542196!10207-103F9;0.425721!10050-101G5;0.410192!10051-101G6;0.937933!10016-101C7;0.572791!10046-101G1;0.900858!10778-110G4;0.400693!10633-108I3;0.404086!10818-111B8;0.321602!10819-111B9;0.73641!10820-111C1;0.747024!10484-107A7;0.737745!10808-111A7;0.120397!10169-103B7;0.505223!10153-102I9;0.0994467!13425-144D5;0.138677!13433-144E4;0.347321!13437-144E8;0.510718!11904-125F5;0.545667!11905-125F6;0.764412!10039-101F3;0.465677!10791-110H8;0.0838799!10017-101C8;0.299917!10045-101F9;0.80863!10509-107D5;0.654796!10839-111E2;0.089229!10692-109F8;0.119887!10079-102A7;0.0360306!10078-102A6;0.434684!10721-110A1;0.83848!10569-108B2;0.541335!10570-108B3;0.391916!10571-108B4;0.78126!10647-109A8;0.401531!10752-110D5;0.251853!10782-110G8;0.234289!10726-110A6;0.964227!10018-101C9;0.184313!10086-102B5;0.880246!10182-103D2;0.832205!10165-103B3;0.0801193!10499-107C4;0.0728788!10408-106B3;0.251776!10019-101D1;0.344601!10068-101I5;0.678872!10075-102A3;0.500008!10077-102A5;0.452059!10727-110A7;0.697246!10775-110G1;0.389621!10412-106B7;0.986278!12231-129F8;0.174961!12232-129F9;0.420367!12233-129G1;0.400987!12234-129G2;0.441045!10414-106B9;0.260967!10170-103B8;0.594217!10183-103D3;0.09242!10150-102I6;0.0766461!10174-103C3;0.120047!10155-103A2;0.0803178!10038-101F2;0.107306!10838-111E1;0.0597462!10759-110E3;0.238888!10514-107E1;0.234784!10465-106H6;0.129734!10691-109F7;0.185124!10843-111E6;0.104076!10844-111E7;0.416336!11747-123G1;0.246737!11748-123G2;0.99157!11749-123G3;0.473547!11750-123G4;0.864163!11751-123G5;0.853153!11840-124H4;0.842366!11752-123G6;0.804611!11753-123G7;0.876087!11754-123G8;0.881109!11755-123G9;0.732137!11756-123H1;0.974915!11833-124G6;0.707012!11760-123H5;0.533083!11836-124G9;0.607171!11758-123H3;0.93563!11835-124G8;0.486229!11762-123H7;0.864127!11838-124H2;0.593683!11757-123H2;0.707291!11759-123H4;0.81669!11761-123H6;0.824265!11842-124H6;0.80308!11837-124H1;0.205859!10568-108B1;0.992413!13230-141I8;0.315206!13231-141I9;0.355403!10696-109G3;0.499787!10493-107B7;0.794985!10494-107B8;0.0382914!10850-111F4;0.0741687!10851-111F5;0.0406437!10852-111F6;0.166412!10853-111F7;0.431738!10854-111F8;0.172877!10855-111F9;0.83423!10856-111G1;0.348862!10847-111F1;0.594046!10846-111E9;0.906939!10848-111F2;0.298354!10845-111E8;0.428506!10857-111G2;0.497912!10858-111G3;0.295908!10156-103A3;0.263199!11901-125F2;0.119817!11902-125F3;0.559177!11903-125F4;0.859845!10689-109F5;0.896757!10648-109A9;0.0610247!10784-110H1;0.0272265!10744-110C6;0.0889248!10772-110F7;0.247293!10474-106I6;0.387957!10600-108E6;0.758672!10684-109E9;0.232797!12226-129F3;0.676242!12227-129F4;0.0905508!10508-107D4;0.172171!10539-107G8;0.169818!10607-108F4;0.53804!10555-107I6;0.601761!10774-110F9;0.501533!10637-108I7;0.2362!10663-109C6;0.744738!10728-110A8;0.102005!10729-110A9;0.118658!10430-106D7;0.749058!10730-110B1;0.612569!10813-111B3;0.0560492!10812-111B2;0.853671!10037-101F1;0.930002!10172-103C1;0.0771219!10163-103B1;0.0914922!10076-102A4;0.16891!10073-102A1;0.0759319!10036-101E9;0.0769654!10195-103E6;0.0852142!10277-104E7;0.0677119!10434-106E2;0.253568!10550-107I1;0.241645!10545-107H5;0.361972!10544-107H4;0.797675!10704-109H2;0.164825!10510-107D6;0.284198!10558-107I9;0.0874781!10020-101D2;0.590813!10732-110B3;0.941721!10049-101G4;0.287342!10698-109G5;0.670679!10437-106E5;0.0589131!10417-106C3;0.200494!10035-101E8;0.0238782!10171-103B9;0.0792234!10157-103A4;0.0760294!10034-101E7;0.117056!10072-101I9;0.0795371!10199-103F1;0.0908559!10200-103F2;0.260017!10697-109G4;0.439374!10723-110A3;0.764889!10179-103C8;0.203686!10160-103A7;0.11827!10180-103C9;0.0990765!10162-103A9;0.222974!10021-101D3;0.154872!10840-111E3;0.659751!10706-109H4;0.836219!10033-101E6;0.279372!10032-101E5;0.0353203!10490-107B4;0.077036!10439-106E7;0.0781793!10022-101D4;0.50235!10176-103C5;0.296866!10469-106I1;0.0883934!10067-101I4;0.164838!10411-106B6;0.206248!10471-106I3;0.493493!10030-101E3;0.327347!10475-106I7;0.211405!10787-110H4;0.907586!10477-106I9;0.194654!10695-109G2;0.109231!11771-123I7;0.507345!11772-123I8;0.31356!11773-123I9;0.833287!10093-102C3;0.100748!10442-106F1;0.17883!10442-106F1;0.156056!10201-103F3;0.202188!10639-108I9;0.083828!11843-124H7;0.0993943!11841-124H5;0.276612!10693-109F9;0.310439!10436-106E4;0.221696!10483-107A6;0.302433!10282-104F3;0.613453!10023-101D5;0.517952!10066-101I3;0.720219!10065-101I2;0.161191!10800-110I8;0.0908667!10610-108F7;0.800172!10841-111E4;0.538378!10541-107H1;0.484167!10842-111E5;0.494385!10562-108A4;0.727884!10024-101D6;0.573555!10064-101I1;0.13948!10609-108F6;0.0433418!10048-101G3;0.499229!10781-110G7;0.965042!10181-103D1;0.78359!10159-103A6;0.0818423!10056-101H2;0.123089!10737-110B8;0.0251322!10025-101D7;0.602555!10044-101F8;0.400474!10424-106D1;0.510584!10463-106H4;0.692932!10616-108G4;0.0513173!10486-107A9;0.13464!10062-101H8;0.248606!10202-103F4;0.320182!10158-103A5;0.230385!10441-106E9;0.126356!10031-101E4;0.957621!10063-101H9;0.0855094!10063-101H9;0.113762!11763-123H8;0.0322649!11765-123I1;0.339391!11768-123I4;0.392349!10807-111A6;0.241225!10790-110H7;0.34215!10798-110I6;0.55526!10786-110H3;0.732084!10591-108D6;0.0652241!10593-108D8;0.224227!10590-108D5;0.105382!10026-101D8;0.0834006!10096-102C6;0.507938!10168-103B6;0.686885!10154-103A1;0.0694427!10209-103G2;0.126791!10061-101H7;0.321425!10027-101D9;0.226076!10043-101F7;0.808353!10783-110G9;0.549587!10028-101E1;0.359557!10060-101H6;0.554322!10203-103F5;0.81694!10059-101H5;0.40344!10047-101G2;0.393762!10029-101E2;0.257743!10058-101H4;0.512078!10418-106C4;0.219407!10492-107B6;0.222008!10694-109G1;0.12125!10797-110I5;0.576687!10057-101H3;0.315241!10100-102D1;0.409024!10055-101H1;0.568536!10204-103F6;0.149562!10191-103E2;0.831754!10563-108A5;0.203548
|name=motif_CCNGCA
|name=motif_CCNGCA
|tomtom_result=SOK2#MA0385.1;2;0.000710139;0.338026;0.413963;6;CCTGCA;TGCCTGCAGGT;-!PHD1#MA0355.1;1;0.00132615;0.631247;0.420831;6;CCTGCA;ACCTGCAGCA;+!ACE2#MA0267.1;1;0.00682079;3.2467;1;6;CCTGCA;ACCAGCA;+!SWI5#MA0402.1;2;0.0073046;3.47699;1;6;CCTGCA;AACCAGCA;-!Stat3#MA0144.1;3;0.0174316;8.29742;1;6;CCTGCA;CTTCCTGGAA;-!MIG3#MA0339.1;1;0.0193361;9.204;1;6;CCTGCA;CCCCGCA;+!ZMS1#MA0441.1;3;0.0208935;9.94532;1;6;CCTGCA;TTCCCCGCA;+
}}
}}

Latest revision as of 14:57, 7 September 2012

Full Name: motif_CCNGCA

Motif matrix
POACGT
01084800
02084800
03000848
04008480
05084800
06848000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SOK2#MA0385.120.0007101390.3380260.4139636CCTGCATGCCTGCAGGT-
PHD1#MA0355.110.001326150.6312470.4208316CCTGCAACCTGCAGCA+
ACE2#MA0267.110.006820793.246716CCTGCAACCAGCA+
SWI5#MA0402.120.00730463.4769916CCTGCAAACCAGCA-
Stat3#MA0144.130.01743168.2974216CCTGCACTTCCTGGAA-
MIG3#MA0339.110.01933619.20416CCTGCACCCCGCA+
ZMS1#MA0441.130.02089359.9453216CCTGCATTCCCCGCA+
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