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MacroAPE 1083:Motif1044: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;5729;1970;151013;4381!02;34057;11038;105930;12068!03;4031;0;156747;2315!04;5148;7720;146685;3540!05;19212;126838;13101;3942!06;158735;1178;...")
 
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;0.00577659!10809-111A8;0.00719103!10597-108E3;0.0768526!10717-109I6;0.0852341!10455-106G5;0.0102473!10534-107G3;0.882317!10429-106D6;0.586621!10464-106H5;0.870883!10827-111C8;0.673548!10789-110H6;0.514623!10828-111C9;0.775135!10788-110H5;0.646277!10792-110H9;0.904047!10765-110E9;0.522459!10829-111D1;0.640657!10830-111D2;0.633161!10831-111D3;0.485997!10832-111D4;0.746398!10833-111D5;0.444438!10764-110E8;0.578937!10770-110F5;0.537906!10399-106A3;0.746942!10400-106A4;0.670443!10405-106A9;0.690591!10834-111D6;0.702439!10835-111D7;0.416186!10836-111D8;0.602324!10837-111D9;0.505625!10699-109G6;0.465954!10802-111A1;0.506189!10796-110I4;0.727468!10010-101C1;0.129785!10810-111A9;0.23675!10421-106C7;0.104683!10708-109H6;0.728334!12235-129G3;0.0271052!12236-129G4;0.614768!12237-129G5;0.873261!10167-103B5;0.48013!10151-102I7;0.914222!10428-106D5;0.879694!10795-110I3;0.0609176!10805-111A4;0.651347!10052-101G7;0.0622058!10189-103D9;0.365591!10589-108D4;0.0441469!10425-106D2;0.117519!10427-106D4;0.0268603!10702-109G9;0.562612!10432-106D9;0.583816!10496-107C1;0.0933353!10718-109I7;0.214214!10011-101C2;0.504519!10053-101G8;0.306827!10686-109F2;0.00532384!10084-102B3;0.356589!10012-101C3;0.873979!10085-102B4;0.792554!10482-107A5;0.802824!10419-106C5;0.0321817!10080-102A8;0.0426387!10760-110E4;0.945087!10709-109H7;0.0583298!10710-109H8;0.0780463!10703-109H1;0.126132!10719-109I8;0.0371996!10642-109A3;0.0753363!10177-103C6;0.0570289!10164-103B2;0.988895!10173-103C2;0.915168!10166-103B4;0.563468!10083-102B2;0.774777!10188-103D8;0.687174!10552-107I3;0.928542!10553-107I4;0.241148!10013-101C4;0.0467383!10536-107G5;0.522903!10618-108G6;0.382741!10423-106C9;0.0766437!10785-110H2;0.106554!12238-129G6;0.0592505!12239-129G7;0.263486!12240-129G8;0.885533!10416-106C2;0.089442!10801-110I9;0.718505!10766-110F1;0.861588!10824-111C5;0.930309!10825-111C6;0.369272!10826-111C7;0.341119!10454-106G4;0.339878!10409-106B4;0.355748!10638-108I8;0.914354!10636-108I6;0.0334398!10513-107D9;0.146059!10420-106C6;0.0450756!10082-102B1;0.130009!10014-101C5;0.396846!10070-101I7;0.189733!10452-106G2;0.428553!10453-106G3;0.54692!10449-106F8;0.600532!10042-101F6;0.628826!10069-101I6;0.559809!10193-103E4;0.260774!10631-108I1;0.951325!10438-106E6;0.99582!10488-107B2;0.0956294!10196-103E7;0.0637098!10071-101I8;0.815413!10071-101I8;0.331746!10041-101F5;0.932841!10451-106G1;0.0785081!10450-106F9;0.15061!10604-108F1;0.123091!10605-108F2;0.0660515!10606-108F3;0.0390913!10603-108E9;0.117475!10497-107C2;0.0706182!10448-106F7;0.0223298!10643-109A4;0.283109!10426-106D3;0.00753812!10431-106D8;0.0589411!10197-103E8;0.0950491!10443-106F2;0.172532!10815-111B5;0.0929139!10816-111B6;0.152518!10817-111B7;0.101969!10015-101C6;0.125563!10410-106B5;0.371458!10054-101G9;0.144828!10758-110E2;0.412268!10711-109H9;0.300315!10040-101F4;0.163333!10470-106I2;0.885166!10415-106C1;0.026271!10198-103E9;0.217425!10614-108G2;0.290528!10612-108F9;0.0351646!10549-107H9;0.0872309!10615-108G3;0.104447!10487-107B1;0.0908823!10433-106E1;0.583599!10688-109F4;0.00812731!10444-106F3;0.207842!10444-106F3;0.141926!10485-107A8;0.208932!10413-106B8;0.0539251!10175-103C4;0.0579287!10161-103A8;0.832608!12131-128D7;0.806197!10624-108H3;0.98492!10712-109I1;0.0245681!10205-103F7;0.325946!10206-103F8;0.448447!10207-103F9;0.547997!10050-101G5;0.573648!10051-101G6;0.881501!10016-101C7;0.44502!10046-101G1;0.434982!10778-110G4;0.601819!10633-108I3;0.97058!10818-111B8;0.323234!10819-111B9;0.48!10820-111C1;0.465062!10484-107A7;0.460587!10808-111A7;0.0338145!10169-103B7;0.923131!10153-102I9;0.890419!13425-144D5;0.779681!13433-144E4;0.0519468!13437-144E8;0.0345219!11904-125F5;0.0623719!11905-125F6;0.35421!10039-101F3;0.907213!10791-110H8;0.864183!10017-101C8;0.0395567!10045-101F9;0.345088!10509-107D5;0.59015!10839-111E2;0.112124!10692-109F8;0.0697489!10079-102A7;0.0292961!10078-102A6;0.424855!10721-110A1;0.509671!10569-108B2;0.109192!10570-108B3;0.952696!10571-108B4;0.74118!10647-109A8;0.770321!10752-110D5;0.0864416!10782-110G8;0.3731!10726-110A6;0.0336916!10018-101C9;0.0308619!10086-102B5;0.0538756!10182-103D2;0.262402!10165-103B3;0.946711!10499-107C4;0.835107!10408-106B3;0.0116332!10019-101D1;0.00626238!10068-101I5;0.193699!10075-102A3;0.469133!10077-102A5;0.152627!10727-110A7;0.0133792!10775-110G1;0.942174!10412-106B7;0.812126!12231-129F8;0.301678!12232-129F9;0.574083!12233-129G1;0.724845!12234-129G2;0.608989!10414-106B9;0.279936!10170-103B8;0.10101!10183-103D3;0.981294!10150-102I6;0.938707!10174-103C3;0.862684!10155-103A2;0.916576!10038-101F2;0.592032!10838-111E1;0.570716!10759-110E3;0.0489278!10514-107E1;0.370972!10465-106H6;0.155572!10691-109F7;0.0696468!10843-111E6;0.249978!10844-111E7;0.124738!11747-123G1;0.154867!11748-123G2;0.165792!11749-123G3;0.0423221!11750-123G4;0.455525!11751-123G5;0.433012!11840-124H4;0.923942!11752-123G6;0.694915!11753-123G7;0.852395!11754-123G8;0.340235!11755-123G9;0.156539!11756-123H1;0.171279!11833-124G6;0.394851!11760-123H5;0.719679!11836-124G9;0.174188!11758-123H3;0.623558!11835-124G8;0.794017!11762-123H7;0.915855!11838-124H2;0.996767!11757-123H2;0.749349!11759-123H4;0.454925!11761-123H6;0.152228!11842-124H6;0.823099!11837-124H1;0.294516!10568-108B1;0.769076!13230-141I8;0.884024!13231-141I9;0.709311!10696-109G3;0.582343!10493-107B7;0.623896!10494-107B8;0.0253963!10850-111F4;0.0289322!10851-111F5;0.400913!10852-111F6;0.0849124!10853-111F7;0.0977101!10854-111F8;0.146465!10855-111F9;0.0166314!10856-111G1;0.916254!10847-111F1;0.0751852!10846-111E9;0.0277386!10848-111F2;0.0679964!10845-111E8;0.0484387!10857-111G2;0.152703!10858-111G3;0.131633!10156-103A3;0.324405!11901-125F2;0.85365!11902-125F3;0.248937!11903-125F4;0.580649!10689-109F5;0.720549!10648-109A9;0.113107!10784-110H1;0.0254259!10744-110C6;0.191464!10772-110F7;0.410413!10474-106I6;0.614906!10600-108E6;0.869059!10684-109E9;0.051429!12226-129F3;0.146686!12227-129F4;0.103126!10508-107D4;0.212826!10539-107G8;0.220871!10607-108F4;0.270405!10555-107I6;0.0354599!10774-110F9;0.136534!10637-108I7;0.172167!10663-109C6;0.107015!10728-110A8;0.025801!10729-110A9;0.0881719!10430-106D7;0.41544!10730-110B1;0.327277!10813-111B3;0.110258!10812-111B2;0.079844!10037-101F1;0.501184!10172-103C1;0.854075!10163-103B1;0.833719!10076-102A4;0.891896!10073-102A1;0.929268!10036-101E9;0.746255!10195-103E6;0.936067!10277-104E7;0.922003!10434-106E2;0.93518!10550-107I1;0.0404098!10545-107H5;0.0565044!10544-107H4;0.170478!10704-109H2;0.36678!10510-107D6;0.422006!10558-107I9;0.153263!10020-101D2;0.0650936!10732-110B3;0.587175!10049-101G4;0.151077!10698-109G5;0.427168!10437-106E5;0.0951578!10417-106C3;0.27887!10035-101E8;0.0492346!10171-103B9;0.909371!10157-103A4;0.846725!10034-101E7;0.868915!10072-101I9;0.914001!10199-103F1;0.710283!10200-103F2;0.0997358!10697-109G4;0.236855!10723-110A3;0.12481!10179-103C8;0.024133!10160-103A7;0.850985!10180-103C9;0.90658!10162-103A9;0.875089!10021-101D3;0.832112!10840-111E3;0.0893325!10706-109H4;0.754085!10033-101E6;0.128958!10032-101E5;0.837775!10490-107B4;0.868385!10439-106E7;0.0214622!10022-101D4;0.0319124!10176-103C5;0.466091!10469-106I1;0.907442!10067-101I4;0.0103338!10411-106B6;0.926786!10471-106I3;0.133185!10030-101E3;0.026334!10475-106I7;0.444676!10787-110H4;0.0384235!10477-106I9;0.163249!10695-109G2;0.155021!11771-123I7;0.430405!11772-123I8;0.0104627!11773-123I9;0.00686558!10093-102C3;0.0833823!10442-106F1;0.099358!10442-106F1;0.463364!10201-103F3;0.583761!10639-108I9;0.608483!11843-124H7;0.0998459!11841-124H5;0.0533614!10693-109F9;0.229192!10436-106E4;0.0301623!10483-107A6;0.411874!10282-104F3;0.41455!10023-101D5;0.210792!10066-101I3;0.171649!10065-101I2;0.34053!10800-110I8;0.40468!10610-108F7;0.0831616!10841-111E4;0.0916507!10541-107H1;0.118444!10842-111E5;0.139702!10562-108A4;0.0828389!10024-101D6;0.0990521!10064-101I1;0.150873!10609-108F6;0.152599!10048-101G3;0.264512!10781-110G7;0.566852!10181-103D1;0.631142!10159-103A6;0.845451!10056-101H2;0.624652!10737-110B8;0.773641!10025-101D7;0.525491!10044-101F8;0.0248002!10424-106D1;0.0759952!10463-106H4;0.852224!10616-108G4;0.0255663!10486-107A9;0.114525!10062-101H8;0.248082!10202-103F4;0.465449!10158-103A5;0.0950923!10441-106E9;0.655317!10031-101E4;0.0494012!10063-101H9;0.854881!10063-101H9;0.779642!11763-123H8;0.163141!11765-123I1;0.865708!11768-123I4;0.973421!10807-111A6;0.909607!10790-110H7;0.113455!10798-110I6;0.18517!10786-110H3;0.0512539!10591-108D6;0.0296128!10593-108D8;0.0627608!10590-108D5;0.0744607!10026-101D8;0.124812!10096-102C6;0.50921!10168-103B6;0.227012!10154-103A1;0.863254!10209-103G2;0.720801!10061-101H7;0.158924!10027-101D9;0.303736!10043-101F7;0.00604055!10783-110G9;0.00500814!10028-101E1;0.20184!10060-101H6;0.545009!10203-103F5;0.607102!10059-101H5;0.216995!10047-101G2;0.2839!10029-101E2;0.03784!10058-101H4;0.131574!10418-106C4;0.329747!10492-107B6;0.149118!10694-109G1;0.0482004!10797-110I5;0.0658274!10057-101H3;0.0248969!10100-102D1;0.432982!10055-101H1;0.524684!10204-103F6;0.947708!10191-103E2;0.687588!10563-108A5;0.0485582
|name=motif1044
|name=motif1044
|tomtom_result=SP1#MA0079.2;0;0.000864858;0.411672;0.431668;7;GGGGCAG;GGGGCGGGGT;+!abi4#MA0123.1;1;0.000907095;0.431777;0.431668;7;GGGGCAG;GGGGGCACCG;-!SP1#MA0079.2;1;0.00218963;1.04226;0.694666;7;GGGGCAG;GGGGGCGGGG;-!PPARG::RXRA#MA0065.2;2;0.0036973;1.75991;0.876736;7;GGGGCAG;GTAGGGCAAAGGTCA;+!btd#MA0443.1;2;0.00460587;2.19239;0.876736;7;GGGGCAG;AGGGGGCGGA;+!SPI1#MA0080.1;-1;0.00922752;4.3923;0.999747;6;GGGGCAG;CGGAAG;+!CTCF#MA0139.1;10;0.00969257;4.61367;0.999747;7;GGGGCAG;TGGCCACCAGGGGGCGCTA;+!INSM1#MA0155.1;6;0.0119307;5.67901;0.999747;6;GGGGCAG;TGTCAGGGGGCG;+!MZF1_5-13#MA0057.1;3;0.0128833;6.13244;0.999747;7;GGGGCAG;GGAGGGGGAA;+!ESR1#MA0112.2;0;0.013562;6.45552;0.999747;7;GGGGCAG;AGGTCAGGGTGACCTGGGCC;-!ZMS1#MA0441.1;3;0.016799;7.9963;0.999747;6;GGGGCAG;TGCGGGGAA;-!CRZ1#MA0285.1;0;0.0180612;8.59712;0.999747;7;GGGGCAG;GTGGCTTAG;-!GCR2#MA0305.1;-1;0.0189883;9.03842;0.999747;6;GGGGCAG;AGGAAGC;-
}}
}}

Latest revision as of 14:45, 7 September 2012

Full Name: motif1044

Motif matrix
POACGT
01572919701510134381
02340571103810593012068
03403101567472315
04514877201466853540
0519212126838131013942
06158735117803180
071202939160078874

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.200.0008648580.4116720.4316687GGGGCAGGGGGCGGGGT+
abi4#MA0123.110.0009070950.4317770.4316687GGGGCAGGGGGGCACCG-
SP1#MA0079.210.002189631.042260.6946667GGGGCAGGGGGGCGGGG-
PPARG::RXRA#MA0065.220.00369731.759910.8767367GGGGCAGGTAGGGCAAAGGTCA+
btd#MA0443.120.004605872.192390.8767367GGGGCAGAGGGGGCGGA+
SPI1#MA0080.1-10.009227524.39230.9997476GGGGCAGCGGAAG+
CTCF#MA0139.1100.009692574.613670.9997477GGGGCAGTGGCCACCAGGGGGCGCTA+
INSM1#MA0155.160.01193075.679010.9997476GGGGCAGTGTCAGGGGGCG+
MZF1_5-13#MA0057.130.01288336.132440.9997477GGGGCAGGGAGGGGGAA+
ESR1#MA0112.200.0135626.455520.9997477GGGGCAGAGGTCAGGGTGACCTGGGCC-
ZMS1#MA0441.130.0167997.99630.9997476GGGGCAGTGCGGGGAA-
CRZ1#MA0285.100.01806128.597120.9997477GGGGCAGGTGGCTTAG-
GCR2#MA0305.1-10.01898839.038420.9997476GGGGCAGAGGAAGC-
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