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MacroAPE 1083:Motif TGNACC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;9984!02;0;0;9984;0!03;2496;2496;2496;2496!04;9984;0;0;0!05;0;9984;0;0!06;0;9984;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.6244...")
 
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0788-110H5;0.972688!10792-110H9;0.828713!10765-110E9;0.980904!10829-111D1;0.974941!10830-111D2;0.902553!10831-111D3;0.945298!10832-111D4;0.744527!10833-111D5;0.824516!10764-110E8;0.956816!10770-110F5;0.652852!10399-106A3;0.78512!10400-106A4;0.931827!10405-106A9;0.995503!10834-111D6;0.883691!10835-111D7;0.993028!10836-111D8;0.761574!10837-111D9;0.973588!10699-109G6;0.680901!10802-111A1;0.329069!10796-110I4;0.611533!10010-101C1;0.694595!10810-111A9;0.812179!10421-106C7;0.863722!10708-109H6;0.497688!12235-129G3;0.458117!12236-129G4;0.317421!12237-129G5;0.234519!10167-103B5;0.331173!10151-102I7;0.277388!10428-106D5;0.409015!10795-110I3;0.0871716!10805-111A4;0.977321!10052-101G7;0.914946!10189-103D9;0.746273!10589-108D4;0.438369!10425-106D2;0.853721!10427-106D4;0.226539!10702-109G9;0.715235!10432-106D9;0.524462!10496-107C1;0.729577!10718-109I7;0.558216!10011-101C2;0.958067!10053-101G8;0.775064!10686-109F2;0.136911!10084-102B3;0.255703!10012-101C3;0.268697!10085-102B4;0.293256!10482-107A5;0.331237!10419-106C5;0.891361!10080-102A8;0.561511!10760-110E4;0.823963!10709-109H7;0.557511!10710-109H8;0.733071!10703-109H1;0.655568!10719-109I8;0.319243!10642-109A3;0.775458!10177-103C6;0.508382!10164-103B2;0.269756!10173-103C2;0.327215!10166-103B4;0.282689!10083-102B2;0.474845!10188-103D8;0.282821!10552-107I3;0.283224!10553-107I4;0.61983!10013-101C4;0.15127!10536-107G5;0.977672!10618-108G6;0.0964061!10423-106C9;0.809053!10785-110H2;0.725741!12238-129G6;0.779394!12239-129G7;0.439637!12240-129G8;0.934666!10416-106C2;0.452439!10801-110I9;0.589032!10766-110F1;0.431067!10824-111C5;0.541568!10825-111C6;0.710358!10826-111C7;0.729711!10454-106G4;0.621959!10409-106B4;0.695125!10638-108I8;0.509626!10636-108I6;0.798495!10513-107D9;0.807359!10420-106C6;0.600161!10082-102B1;0.634557!10014-101C5;0.553777!10070-101I7;0.700603!10452-106G2;0.545392!10453-106G3;0.703951!10449-106F8;0.93121!10042-101F6;0.854616!10069-101I6;0.304771!10193-103E4;0.838496!10631-108I1;0.230558!10438-106E6;0.996986!10488-107B2;0.83851!10196-103E7;0.664372!10071-101I8;0.759851!10071-101I8;0.307406!10041-101F5;0.353078!10451-106G1;0.722021!10450-106F9;0.545283!10604-108F1;0.557895!10605-108F2;0.442873!10606-108F3;0.44072!10603-108E9;0.434182!10497-107C2;0.394849!10448-106F7;0.695277!10643-109A4;0.474371!10426-106D3;0.813563!10431-106D8;0.270931!10197-103E8;0.110356!10443-106F2;0.860162!10815-111B5;0.382055!10816-111B6;0.548543!10817-111B7;0.601661!10015-101C6;0.646625!10410-106B5;0.747829!10054-101G9;0.88652!10758-110E2;0.724642!10711-109H9;0.211882!10040-101F4;0.788766!10470-106I2;0.351577!10415-106C1;0.81562!10198-103E9;0.317428!10614-108G2;0.528823!10612-108F9;0.908597!10549-107H9;0.739978!10615-108G3;0.565925!10487-107B1;0.589607!10433-106E1;0.611164!10688-109F4;0.424721!10444-106F3;0.492371!10444-106F3;0.27887!10485-107A8;0.280358!10413-106B8;0.234992!10175-103C4;0.108682!10161-103A8;0.212726!12131-128D7;0.385981!10624-108H3;0.991963!10712-109I1;0.562386!10205-103F7;0.37083!10206-103F8;0.886375!10207-103F9;0.741316!10050-101G5;0.283878!10051-101G6;0.712141!10016-101C7;0.626919!10046-101G1;0.29744!10778-110G4;0.430972!10633-108I3;0.841112!10818-111B8;0.817222!10819-111B9;0.957806!10820-111C1;0.891668!10484-107A7;0.877123!10808-111A7;0.367934!10169-103B7;0.770885!10153-102I9;0.293988!13425-144D5;0.370668!13433-144E4;0.311249!13437-144E8;0.182149!11904-125F5;0.16533!11905-125F6;0.202363!10039-101F3;0.494002!10791-110H8;0.308551!10017-101C8;0.267761!10045-101F9;0.433043!10509-107D5;0.627094!10839-111E2;0.716753!10692-109F8;0.595167!10079-102A7;0.21493!10078-102A6;0.778417!10721-110A1;0.431941!10569-108B2;0.764397!10570-108B3;0.926358!10571-108B4;0.473528!10647-109A8;0.912199!10752-110D5;0.702397!10782-110G8;0.349603!10726-110A6;0.289195!10018-101C9;0.324184!10086-102B5;0.758789!10182-103D2;0.605947!10165-103B3;0.178818!10499-107C4;0.266721!10408-106B3;0.391837!10019-101D1;0.945671!10068-101I5;0.769671!10075-102A3;0.849528!10077-102A5;0.690077!10727-110A7;0.372377!10775-110G1;0.963542!10412-106B7;0.963846!12231-129F8;0.404748!12232-129F9;0.269846!12233-129G1;0.659896!12234-129G2;0.479688!10414-106B9;0.404321!10170-103B8;0.714798!10183-103D3;0.265055!10150-102I6;0.224486!10174-103C3;0.314355!10155-103A2;0.277657!10038-101F2;0.359827!10838-111E1;0.304545!10759-110E3;0.657475!10514-107E1;0.293297!10465-106H6;0.177117!10691-109F7;0.435486!10843-111E6;0.221155!10844-111E7;0.450554!11747-123G1;0.367807!11748-123G2;0.914742!11749-123G3;0.769269!11750-123G4;0.577943!11751-123G5;0.760932!11840-124H4;0.609251!11752-123G6;0.704133!11753-123G7;0.725595!11754-123G8;0.633242!11755-123G9;0.997729!11756-123H1;0.71626!11833-124G6;0.757454!11760-123H5;0.923627!11836-124G9;0.779251!11758-123H3;0.864777!11835-124G8;0.732197!11762-123H7;0.975525!11838-124H2;0.832288!11757-123H2;0.974288!11759-123H4;0.621007!11761-123H6;0.659923!11842-124H6;0.959756!11837-124H1;0.984835!10568-108B1;0.83453!13230-141I8;0.722663!13231-141I9;0.803086!10696-109G3;0.950975!10493-107B7;0.358445!10494-107B8;0.483224!10850-111F4;0.204123!10851-111F5;0.348445!10852-111F6;0.203641!10853-111F7;0.271264!10854-111F8;0.404819!10855-111F9;0.117776!10856-111G1;0.688277!10847-111F1;0.328795!10846-111E9;0.103963!10848-111F2;0.522997!10845-111E8;0.485293!10857-111G2;0.621459!10858-111G3;0.404121!10156-103A3;0.264112!11901-125F2;0.341386!11902-125F3;0.396605!11903-125F4;0.428061!10689-109F5;0.857036!10648-109A9;0.252199!10784-110H1;0.0347898!10744-110C6;0.439136!10772-110F7;0.882375!10474-106I6;0.941764!10600-108E6;0.97334!10684-109E9;0.660355!12226-129F3;0.704728!12227-129F4;0.481056!10508-107D4;0.571929!10539-107G8;0.751581!10607-108F4;0.616682!10555-107I6;0.703005!10774-110F9;0.659702!10637-108I7;0.897365!10663-109C6;0.49815!10728-110A8;0.509085!10729-110A9;0.554162!10430-106D7;0.841218!10730-110B1;0.469876!10813-111B3;0.20956!10812-111B2;0.863459!10037-101F1;0.769078!10172-103C1;0.341182!10163-103B1;0.364389!10076-102A4;0.384624!10073-102A1;0.231704!10036-101E9;0.365601!10195-103E6;0.24093!10277-104E7;0.299576!10434-106E2;0.234725!10550-107I1;0.373028!10545-107H5;0.479672!10544-107H4;0.513983!10704-109H2;0.183034!10510-107D6;0.312692!10558-107I9;0.322787!10020-101D2;0.514791!10732-110B3;0.916853!10049-101G4;0.935916!10698-109G5;0.48577!10437-106E5;0.615933!10417-106C3;0.0472163!10035-101E8;0.614641!10171-103B9;0.284211!10157-103A4;0.202644!10034-101E7;0.319347!10072-101I9;0.268547!10199-103F1;0.51035!10200-103F2;0.632677!10697-109G4;0.811663!10723-110A3;0.6402!10179-103C8;0.274063!10160-103A7;0.327438!10180-103C9;0.407256!10162-103A9;0.654643!10021-101D3;0.846561!10840-111E3;0.855893!10706-109H4;0.792467!10033-101E6;0.705413!10032-101E5;0.210652!10490-107B4;0.253755!10439-106E7;0.528106!10022-101D4;0.823533!10176-103C5;0.98059!10469-106I1;0.283523!10067-101I4;0.939434!10411-106B6;0.755745!10471-106I3;0.655199!10030-101E3;0.536932!10475-106I7;0.578489!10787-110H4;0.926904!10477-106I9;0.776812!10695-109G2;0.930352!11771-123I7;0.487167!11772-123I8;0.0170719!11773-123I9;0.021441!10093-102C3;0.201818!10442-106F1;0.698508!10442-106F1;0.229687!10201-103F3;0.178729!10639-108I9;0.877421!11843-124H7;0.566932!11841-124H5;0.496682!10693-109F9;0.687375!10436-106E4;0.528742!10483-107A6;0.862441!10282-104F3;0.640019!10023-101D5;0.487751!10066-101I3;0.483384!10065-101I2;0.79099!10800-110I8;0.974545!10610-108F7;0.933889!10841-111E4;0.908219!10541-107H1;0.796453!10842-111E5;0.86331!10562-108A4;0.792775!10024-101D6;0.39818!10064-101I1;0.571649!10609-108F6;0.369433!10048-101G3;0.785728!10781-110G7;0.450126!10181-103D1;0.768814!10159-103A6;0.267717!10056-101H2;0.477157!10737-110B8;0.39534!10025-101D7;0.76753!10044-101F8;0.44202!10424-106D1;0.701016!10463-106H4;0.88608!10616-108G4;0.367003!10486-107A9;0.58975!10062-101H8;0.551345!10202-103F4;0.788281!10158-103A5;0.606388!10441-106E9;0.395199!10031-101E4;0.916693!10063-101H9;0.241808!10063-101H9;0.421373!11763-123H8;0.353942!11765-123I1;0.986038!11768-123I4;0.930117!10807-111A6;0.787794!10790-110H7;0.992042!10798-110I6;0.700894!10786-110H3;0.790551!10591-108D6;0.404695!10593-108D8;0.258434!10590-108D5;0.489512!10026-101D8;0.498357!10096-102C6;0.987862!10168-103B6;0.969616!10154-103A1;0.214905!10209-103G2;0.361096!10061-101H7;0.912751!10027-101D9;0.814994!10043-101F7;0.785825!10783-110G9;0.961983!10028-101E1;0.783182!10060-101H6;0.648926!10203-103F5;0.739217!10059-101H5;0.902998!10047-101G2;0.889501!10029-101E2;0.840375!10058-101H4;0.802474!10418-106C4;0.97452!10492-107B6;0.265154!10694-109G1;0.664534!10797-110I5;0.786458!10057-101H3;0.858395!10100-102D1;0.79698!10055-101H1;0.834705!10204-103F6;0.868851!10191-103E2;0.772755!10563-108A5;0.603138
|name=motif_TGNACC
|name=motif_TGNACC
|tomtom_result=AFT1#MA0269.1;8;0.00527211;2.50952;1;6;TGAACC;TTACATATTGCACCCGATTGG;+!NR2F1#MA0017.1;7;0.00700722;3.33544;1;6;TGAACC;TGACCTTTGAACCT;+!NRG1#MA0347.1;5;0.0121839;5.79953;1;6;TGAACC;TGCGATGGACCCTGATCTAG;-!RXRA::VDR#MA0074.1;0;0.0129454;6.16199;1;6;TGAACC;TGAACCCGATGACCC;-!OPI1#MA0349.1;0;0.0136371;6.49127;1;6;TGAACC;CGAACCG;+!Ar#MA0007.1;12;0.0171204;8.14933;1;6;TGAACC;ATAAGAACACCCTGTACCCGCC;+
}}
}}

Latest revision as of 14:38, 7 September 2012

Full Name: motif_TGNACC

Motif matrix
POACGT
010009984
020099840
032496249624962496
049984000
050998400
060998400

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
AFT1#MA0269.180.005272112.5095216TGAACCTTACATATTGCACCCGATTGG+
NR2F1#MA0017.170.007007223.3354416TGAACCTGACCTTTGAACCT+
NRG1#MA0347.150.01218395.7995316TGAACCTGCGATGGACCCTGATCTAG-
RXRA::VDR#MA0074.100.01294546.1619916TGAACCTGAACCCGATGACCC-
OPI1#MA0349.100.01363716.4912716TGAACCCGAACCG+
Ar#MA0007.1120.01712048.1493316TGAACCATAAGAACACCCTGTACCCGCC+
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