MacroAPE 1083:PRRX2 f1: Difference between revisions
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| ||
|name=PRRX2_f1 | |name=PRRX2_f1 | ||
|tomtom_result=CG32532#MA0179.1;0;1.60204e-08;7.62572e-06;6.58799e-06;7;TTAATTG;TTAATTA;+!en#MA0220.1;0;1.60204e-08;7.62572e-06;6.58799e-06;7;TTAATTG;TTAATTA;+!CG13424#MA0175.1;0;1.54206e-07;7.34023e-05;4.22756e-05;7;TTAATTG;TTAATTG;+!Rx#MA0202.1;0;3.97652e-07;0.000189282;5.45081e-05;7;TTAATTG;CTAATTA;+!slou#MA0245.1;0;3.97652e-07;0.000189282;5.45081e-05;7;TTAATTG;TTAATTA;+!unpg#MA0251.1;0;3.97652e-07;0.000189282;5.45081e-05;7;TTAATTG;TTAATTA;+!hbn#MA0226.1;0;5.88791e-07;0.000280264;6.05313e-05;7;TTAATTG;TTAATTA;+!unc-4#MA0250.1;0;5.88791e-07;0.000280264;6.05313e-05;7;TTAATTG;TTAATTG;+!Vsx1#MA0181.1;0;8.37601e-07;0.000398698;6.88884e-05;7;TTAATTG;TTAATTA;+!PHDP#MA0457.1;0;8.37601e-07;0.000398698;6.88884e-05;7;TTAATTG;TTAATTA;+!OdsH#MA0455.1;0;1.54496e-06;0.000735401;0.000105888;7;TTAATTG;CTAATTA;+!OdsH#MA0455.1;0;1.54496e-06;0.000735401;0.000105888;7;TTAATTG;CTAATTA;+!CG9876#MA0184.1;0;2.02716e-06;0.00096493;0.000128249;7;TTAATTG;CTAATTA;+!CG15696#MA0176.1;0;3.32322e-06;0.00158186;0.000182212;7;TTAATTG;TTAATTA;+!NK7.1#MA0196.1;0;3.32322e-06;0.00158186;0.000182212;7;TTAATTG;TTAATTG;+!inv#MA0229.1;1;4.05432e-06;0.00192986;0.000190916;7;TTAATTG;TCTAATTA;+!CG32105#MA0178.1;0;4.17836e-06;0.0019889;0.000190916;7;TTAATTG;TTAATTA;+!Pph13#MA0200.1;0;4.17836e-06;0.0019889;0.000190916;7;TTAATTG;CTAATTA;+!repo#MA0240.1;0;5.218e-06;0.00248377;0.00022587;7;TTAATTG;TTAATTA;+!Lim3#MA0195.1;0;6.4622e-06;0.00307601;0.000253087;7;TTAATTG;TTAATTA;+!otp#MA0236.1;0;6.4622e-06;0.00307601;0.000253087;7;TTAATTG;TTAATTA;+!Hmx#MA0192.1;0;7.92783e-06;0.00377365;0.000296374;7;TTAATTG;TTAATTG;+!HGTX#MA0191.1;0;9.66708e-06;0.00460153;0.000345682;7;TTAATTG;TTAATTA;+!Vsx2#MA0180.1;1;1.2535e-05;0.00596667;0.000429559;7;TTAATTG;TTTAATTAG;+!Awh#MA0167.1;0;1.41034e-05;0.0067132;0.000429604;7;TTAATTG;TTAATTA;+!bsh#MA0214.1;0;1.41034e-05;0.0067132;0.000429604;7;TTAATTG;TTAATTG;+!ro#MA0241.1;0;1.41034e-05;0.0067132;0.000429604;7;TTAATTG;CTAATTA;+!YOX1#MA0433.1;0;1.58556e-05;0.00754726;0.000465729;7;TTAATTG;TTAATTAA;+!ap#MA0209.1;0;2.00976e-05;0.00956643;0.000569973;7;TTAATTG;CTAATTA;+!E5#MA0189.1;0;2.38289e-05;0.0113426;0.000632195;7;TTAATTG;TTAATTA;+!zen2#MA0257.1;0;2.38289e-05;0.0113426;0.000632195;7;TTAATTG;TTAATTA;+!CG11085#MA0171.1;0;2.84626e-05;0.0135482;0.000709364;7;TTAATTG;TTAATTG;+!CG18599#MA0177.1;0;2.84626e-05;0.0135482;0.000709364;7;TTAATTG;CTAATTA;+!Prrx2#MA0075.1;-1;4.11692e-05;0.0195965;0.000995869;5;TTAATTG;TAATT;-!ems#MA0219.1;0;5.01835e-05;0.0238874;0.00117924;7;TTAATTG;TTAATGA;+!B-H2#MA0169.1;0;7.37665e-05;0.0351129;0.00155562;7;TTAATTG;TTAATTG;+!C15#MA0170.1;0;7.37665e-05;0.0351129;0.00155562;7;TTAATTG;TTAATTA;+!Lim1#MA0194.1;0;7.37665e-05;0.0351129;0.00155562;7;TTAATTG;TTAATTA;+!abd-A#MA0206.1;0;7.37665e-05;0.0351129;0.00155562;7;TTAATTG;TTAATTA;+!Ubx#MA0094.2;1;7.94297e-05;0.0378085;0.00163317;7;TTAATTG;TTTAATTA;+!CG11294#MA0172.1;0;8.84344e-05;0.0420948;0.00177397;7;TTAATTG;TTAATTA;+!Dll#MA0187.1;-1;0.00010528;0.0501132;0.00201366;6;TTAATTG;TAATTAC;+!CG34031#MA0444.1;0;0.00010528;0.0501132;0.00201366;7;TTAATTG;TTAATTG;+!Nobox#MA0125.1;-1;0.000111681;0.0531601;0.00208754;6;TTAATTG;TAATTGGT;+!ind#MA0228.1;0;0.000124321;0.0591767;0.00222277;7;TTAATTG;CTAATTA;+!tup#MA0248.1;0;0.000124321;0.0591767;0.00222277;7;TTAATTG;TTAATTG;+!Dr#MA0188.1;-1;0.000169856;0.0808517;0.00279397;6;TTAATTG;TAATTGG;-!al#MA0208.1;0;0.000169856;0.0808517;0.00279397;7;TTAATTG;TTAATTA;-!exex#MA0224.1;0;0.000169856;0.0808517;0.00279397;7;TTAATTG;GTAATTA;+!exex#MA0224.1;0;0.000169856;0.0808517;0.00279397;7;TTAATTG;GTAATTA;+!B-H1#MA0168.1;0;0.000226317;0.107727;0.00338426;7;TTAATTG;TTAATTG;+!eve#MA0221.1;0;0.000226317;0.107727;0.00338426;7;TTAATTG;CTAATGA;+!lab#MA0230.1;0;0.000226317;0.107727;0.00338426;7;TTAATTG;TTAATTA;+!pb#MA0238.1;0;0.000226317;0.107727;0.00338426;7;TTAATTG;TTAATTA;+!ftz#MA0225.1;0;0.000259348;0.12345;0.00380894;7;TTAATTG;TTAATGA;+!Oct#MA0197.1;1;0.000276552;0.131639;0.00399035;7;TTAATTG;TTTAATTA;+!Pdx1#MA0132.1;0;0.000363736;0.173138;0.0049859;6;TTAATTG;CTAATT;+!lbl#MA0232.1;-1;0.000363736;0.173138;0.0049859;6;TTAATTG;TAATTA;+!YHP1#MA0426.1;-1;0.000363736;0.173138;0.0049859;6;TTAATTG;TAATTG;+!CG4328#MA0182.1;0;0.000433084;0.206148;0.00574499;7;TTAATTG;TTTATTA;+!CG7056#MA0183.1;1;0.000458724;0.218353;0.00598853;7;TTAATTG;TTTAATTA;+!SMP1#MA0383.1;6;0.00049246;0.234411;0.00613671;7;TTAATTG;TTACCTATAATTAAATTAGCA;+!Lhx3#MA0135.1;2;0.000553203;0.263324;0.00679076;7;TTAATTG;GATTAATTAATTT;-!Nkx2-5#MA0063.1;0;0.000732821;0.348823;0.0087349;7;TTAATTG;TTAATTG;+!H2.0#MA0448.1;0;0.000732821;0.348823;0.0087349;7;TTAATTG;TTAATTA;+!Ubx#MA0094.2;-1;0.00103458;0.492462;0.0118356;4;TTAATTG;TAAT;+!Antp#MA0166.1;0;0.00137162;0.652891;0.0141011;7;TTAATTG;TTAATGA;+!btn#MA0215.1;0;0.00160561;0.764269;0.01591;7;TTAATTG;TTAATGA;+!HAT5#MA0008.1;1;0.00221744;1.0555;0.0188246;7;TTAATTG;AATAATTG;-!Scr#MA0203.1;0;0.00229904;1.09434;0.0188246;7;TTAATTG;TTAATGA;+!cad#MA0216.1;0;0.00279639;1.33108;0.0219037;7;TTAATTG;TTTATTG;+!CG42234#MA0174.1;0;0.00316881;1.50835;0.0239099;7;TTAATTG;TTTATTA;+!zen#MA0256.1;0;0.00336877;1.60354;0.0249608;7;TTAATTG;CTAATGA;+!lbe#MA0231.1;-1;0.00350213;1.66702;0.0255901;6;TTAATTG;TAACTA;+!HOXA5#MA0158.1;2;0.00356877;1.69873;0.0255901;6;TTAATTG;CACTAATT;+!Dfd#MA0186.1;0;0.00479603;2.28291;0.033147;7;TTAATTG;TTAATGA;+!SPT2#MA0387.1;4;0.00654815;3.11692;0.0441436;6;TTAATTG;TTCTTTAATT;-!ATHB-5#MA0110.1;1;0.00768961;3.66026;0.050193;7;TTAATTG;AATAATTGG;-!HNF1A#MA0046.1;2;0.00922583;4.3915;0.05882;7;TTAATTG;GGTTAATAATTAAC;+!bap#MA0211.1;0;0.0109169;5.19645;0.0680197;7;TTAATTG;TTAAGTG;+!PHO2#MA0356.1;0;0.011415;5.43355;0.0705886;6;TTAATTG;ATAATA;+!onecut#MA0235.1;0;0.0160647;7.6468;0.0926697;7;TTAATTG;TTGATTT;+!ARID3A#MA0151.1;1;0.0161126;7.66958;0.0926697;5;TTAATTG;TTTAAT;- | |||
}} | }} | ||
Latest revision as of 13:58, 7 September 2012
Full Name: PRRX2_f1
| Motif matrix | ||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| CG32532#MA0179.1 | 0 | 1.60204e-08 | 7.62572e-06 | 6.58799e-06 | 7 | TTAATTG | TTAATTA | + |
| en#MA0220.1 | 0 | 1.60204e-08 | 7.62572e-06 | 6.58799e-06 | 7 | TTAATTG | TTAATTA | + |
| CG13424#MA0175.1 | 0 | 1.54206e-07 | 7.34023e-05 | 4.22756e-05 | 7 | TTAATTG | TTAATTG | + |
| Rx#MA0202.1 | 0 | 3.97652e-07 | 0.000189282 | 5.45081e-05 | 7 | TTAATTG | CTAATTA | + |
| slou#MA0245.1 | 0 | 3.97652e-07 | 0.000189282 | 5.45081e-05 | 7 | TTAATTG | TTAATTA | + |
| unpg#MA0251.1 | 0 | 3.97652e-07 | 0.000189282 | 5.45081e-05 | 7 | TTAATTG | TTAATTA | + |
| hbn#MA0226.1 | 0 | 5.88791e-07 | 0.000280264 | 6.05313e-05 | 7 | TTAATTG | TTAATTA | + |
| unc-4#MA0250.1 | 0 | 5.88791e-07 | 0.000280264 | 6.05313e-05 | 7 | TTAATTG | TTAATTG | + |
| Vsx1#MA0181.1 | 0 | 8.37601e-07 | 0.000398698 | 6.88884e-05 | 7 | TTAATTG | TTAATTA | + |
| PHDP#MA0457.1 | 0 | 8.37601e-07 | 0.000398698 | 6.88884e-05 | 7 | TTAATTG | TTAATTA | + |
| OdsH#MA0455.1 | 0 | 1.54496e-06 | 0.000735401 | 0.000105888 | 7 | TTAATTG | CTAATTA | + |
| OdsH#MA0455.1 | 0 | 1.54496e-06 | 0.000735401 | 0.000105888 | 7 | TTAATTG | CTAATTA | + |
| CG9876#MA0184.1 | 0 | 2.02716e-06 | 0.00096493 | 0.000128249 | 7 | TTAATTG | CTAATTA | + |
| CG15696#MA0176.1 | 0 | 3.32322e-06 | 0.00158186 | 0.000182212 | 7 | TTAATTG | TTAATTA | + |
| NK7.1#MA0196.1 | 0 | 3.32322e-06 | 0.00158186 | 0.000182212 | 7 | TTAATTG | TTAATTG | + |
| inv#MA0229.1 | 1 | 4.05432e-06 | 0.00192986 | 0.000190916 | 7 | TTAATTG | TCTAATTA | + |
| CG32105#MA0178.1 | 0 | 4.17836e-06 | 0.0019889 | 0.000190916 | 7 | TTAATTG | TTAATTA | + |
| Pph13#MA0200.1 | 0 | 4.17836e-06 | 0.0019889 | 0.000190916 | 7 | TTAATTG | CTAATTA | + |
| repo#MA0240.1 | 0 | 5.218e-06 | 0.00248377 | 0.00022587 | 7 | TTAATTG | TTAATTA | + |
| Lim3#MA0195.1 | 0 | 6.4622e-06 | 0.00307601 | 0.000253087 | 7 | TTAATTG | TTAATTA | + |
| otp#MA0236.1 | 0 | 6.4622e-06 | 0.00307601 | 0.000253087 | 7 | TTAATTG | TTAATTA | + |
| Hmx#MA0192.1 | 0 | 7.92783e-06 | 0.00377365 | 0.000296374 | 7 | TTAATTG | TTAATTG | + |
| HGTX#MA0191.1 | 0 | 9.66708e-06 | 0.00460153 | 0.000345682 | 7 | TTAATTG | TTAATTA | + |
| Vsx2#MA0180.1 | 1 | 1.2535e-05 | 0.00596667 | 0.000429559 | 7 | TTAATTG | TTTAATTAG | + |
| Awh#MA0167.1 | 0 | 1.41034e-05 | 0.0067132 | 0.000429604 | 7 | TTAATTG | TTAATTA | + |
| bsh#MA0214.1 | 0 | 1.41034e-05 | 0.0067132 | 0.000429604 | 7 | TTAATTG | TTAATTG | + |
| ro#MA0241.1 | 0 | 1.41034e-05 | 0.0067132 | 0.000429604 | 7 | TTAATTG | CTAATTA | + |
| YOX1#MA0433.1 | 0 | 1.58556e-05 | 0.00754726 | 0.000465729 | 7 | TTAATTG | TTAATTAA | + |
| ap#MA0209.1 | 0 | 2.00976e-05 | 0.00956643 | 0.000569973 | 7 | TTAATTG | CTAATTA | + |
| E5#MA0189.1 | 0 | 2.38289e-05 | 0.0113426 | 0.000632195 | 7 | TTAATTG | TTAATTA | + |
| zen2#MA0257.1 | 0 | 2.38289e-05 | 0.0113426 | 0.000632195 | 7 | TTAATTG | TTAATTA | + |
| CG11085#MA0171.1 | 0 | 2.84626e-05 | 0.0135482 | 0.000709364 | 7 | TTAATTG | TTAATTG | + |
| CG18599#MA0177.1 | 0 | 2.84626e-05 | 0.0135482 | 0.000709364 | 7 | TTAATTG | CTAATTA | + |
| Prrx2#MA0075.1 | -1 | 4.11692e-05 | 0.0195965 | 0.000995869 | 5 | TTAATTG | TAATT | - |
| ems#MA0219.1 | 0 | 5.01835e-05 | 0.0238874 | 0.00117924 | 7 | TTAATTG | TTAATGA | + |
| B-H2#MA0169.1 | 0 | 7.37665e-05 | 0.0351129 | 0.00155562 | 7 | TTAATTG | TTAATTG | + |
| C15#MA0170.1 | 0 | 7.37665e-05 | 0.0351129 | 0.00155562 | 7 | TTAATTG | TTAATTA | + |
| Lim1#MA0194.1 | 0 | 7.37665e-05 | 0.0351129 | 0.00155562 | 7 | TTAATTG | TTAATTA | + |
| abd-A#MA0206.1 | 0 | 7.37665e-05 | 0.0351129 | 0.00155562 | 7 | TTAATTG | TTAATTA | + |
| Ubx#MA0094.2 | 1 | 7.94297e-05 | 0.0378085 | 0.00163317 | 7 | TTAATTG | TTTAATTA | + |
| CG11294#MA0172.1 | 0 | 8.84344e-05 | 0.0420948 | 0.00177397 | 7 | TTAATTG | TTAATTA | + |
| Dll#MA0187.1 | -1 | 0.00010528 | 0.0501132 | 0.00201366 | 6 | TTAATTG | TAATTAC | + |
| CG34031#MA0444.1 | 0 | 0.00010528 | 0.0501132 | 0.00201366 | 7 | TTAATTG | TTAATTG | + |
| Nobox#MA0125.1 | -1 | 0.000111681 | 0.0531601 | 0.00208754 | 6 | TTAATTG | TAATTGGT | + |
| ind#MA0228.1 | 0 | 0.000124321 | 0.0591767 | 0.00222277 | 7 | TTAATTG | CTAATTA | + |
| tup#MA0248.1 | 0 | 0.000124321 | 0.0591767 | 0.00222277 | 7 | TTAATTG | TTAATTG | + |
| Dr#MA0188.1 | -1 | 0.000169856 | 0.0808517 | 0.00279397 | 6 | TTAATTG | TAATTGG | - |
| al#MA0208.1 | 0 | 0.000169856 | 0.0808517 | 0.00279397 | 7 | TTAATTG | TTAATTA | - |
| exex#MA0224.1 | 0 | 0.000169856 | 0.0808517 | 0.00279397 | 7 | TTAATTG | GTAATTA | + |
| exex#MA0224.1 | 0 | 0.000169856 | 0.0808517 | 0.00279397 | 7 | TTAATTG | GTAATTA | + |
| B-H1#MA0168.1 | 0 | 0.000226317 | 0.107727 | 0.00338426 | 7 | TTAATTG | TTAATTG | + |
| eve#MA0221.1 | 0 | 0.000226317 | 0.107727 | 0.00338426 | 7 | TTAATTG | CTAATGA | + |
| lab#MA0230.1 | 0 | 0.000226317 | 0.107727 | 0.00338426 | 7 | TTAATTG | TTAATTA | + |
| pb#MA0238.1 | 0 | 0.000226317 | 0.107727 | 0.00338426 | 7 | TTAATTG | TTAATTA | + |
| ftz#MA0225.1 | 0 | 0.000259348 | 0.12345 | 0.00380894 | 7 | TTAATTG | TTAATGA | + |
| Oct#MA0197.1 | 1 | 0.000276552 | 0.131639 | 0.00399035 | 7 | TTAATTG | TTTAATTA | + |
| Pdx1#MA0132.1 | 0 | 0.000363736 | 0.173138 | 0.0049859 | 6 | TTAATTG | CTAATT | + |
| lbl#MA0232.1 | -1 | 0.000363736 | 0.173138 | 0.0049859 | 6 | TTAATTG | TAATTA | + |
| YHP1#MA0426.1 | -1 | 0.000363736 | 0.173138 | 0.0049859 | 6 | TTAATTG | TAATTG | + |
| CG4328#MA0182.1 | 0 | 0.000433084 | 0.206148 | 0.00574499 | 7 | TTAATTG | TTTATTA | + |
| CG7056#MA0183.1 | 1 | 0.000458724 | 0.218353 | 0.00598853 | 7 | TTAATTG | TTTAATTA | + |
| SMP1#MA0383.1 | 6 | 0.00049246 | 0.234411 | 0.00613671 | 7 | TTAATTG | TTACCTATAATTAAATTAGCA | + |
| Lhx3#MA0135.1 | 2 | 0.000553203 | 0.263324 | 0.00679076 | 7 | TTAATTG | GATTAATTAATTT | - |
| Nkx2-5#MA0063.1 | 0 | 0.000732821 | 0.348823 | 0.0087349 | 7 | TTAATTG | TTAATTG | + |
| H2.0#MA0448.1 | 0 | 0.000732821 | 0.348823 | 0.0087349 | 7 | TTAATTG | TTAATTA | + |
| Ubx#MA0094.2 | -1 | 0.00103458 | 0.492462 | 0.0118356 | 4 | TTAATTG | TAAT | + |
| Antp#MA0166.1 | 0 | 0.00137162 | 0.652891 | 0.0141011 | 7 | TTAATTG | TTAATGA | + |
| btn#MA0215.1 | 0 | 0.00160561 | 0.764269 | 0.01591 | 7 | TTAATTG | TTAATGA | + |
| HAT5#MA0008.1 | 1 | 0.00221744 | 1.0555 | 0.0188246 | 7 | TTAATTG | AATAATTG | - |
| Scr#MA0203.1 | 0 | 0.00229904 | 1.09434 | 0.0188246 | 7 | TTAATTG | TTAATGA | + |
| cad#MA0216.1 | 0 | 0.00279639 | 1.33108 | 0.0219037 | 7 | TTAATTG | TTTATTG | + |
| CG42234#MA0174.1 | 0 | 0.00316881 | 1.50835 | 0.0239099 | 7 | TTAATTG | TTTATTA | + |
| zen#MA0256.1 | 0 | 0.00336877 | 1.60354 | 0.0249608 | 7 | TTAATTG | CTAATGA | + |
| lbe#MA0231.1 | -1 | 0.00350213 | 1.66702 | 0.0255901 | 6 | TTAATTG | TAACTA | + |
| HOXA5#MA0158.1 | 2 | 0.00356877 | 1.69873 | 0.0255901 | 6 | TTAATTG | CACTAATT | + |
| Dfd#MA0186.1 | 0 | 0.00479603 | 2.28291 | 0.033147 | 7 | TTAATTG | TTAATGA | + |
| SPT2#MA0387.1 | 4 | 0.00654815 | 3.11692 | 0.0441436 | 6 | TTAATTG | TTCTTTAATT | - |
| ATHB-5#MA0110.1 | 1 | 0.00768961 | 3.66026 | 0.050193 | 7 | TTAATTG | AATAATTGG | - |
| HNF1A#MA0046.1 | 2 | 0.00922583 | 4.3915 | 0.05882 | 7 | TTAATTG | GGTTAATAATTAAC | + |
| bap#MA0211.1 | 0 | 0.0109169 | 5.19645 | 0.0680197 | 7 | TTAATTG | TTAAGTG | + |
| PHO2#MA0356.1 | 0 | 0.011415 | 5.43355 | 0.0705886 | 6 | TTAATTG | ATAATA | + |
| onecut#MA0235.1 | 0 | 0.0160647 | 7.6468 | 0.0926697 | 7 | TTAATTG | TTGATTT | + |
| ARID3A#MA0151.1 | 1 | 0.0161126 | 7.66958 | 0.0926697 | 5 | TTAATTG | TTTAAT | - |
