FFCP PHASE1:Hg19::chr8:66701339..66701344,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.46e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4!UBERON:0004872;1.89e-08;7 | |ontology_enrichment_development_v019=UBERON:0004140;1.46e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4!UBERON:0004872;1.89e-08;7 | ||
|ontology_enrichment_disease=DOID:114!1.67e-26!2;DOID:178!3.98e-14!1;DOID:326!3.98e-14!1;DOID:3978!3.98e-14!1;DOID:3394!3.98e-14!1;DOID:5844!3.98e-14!1;DOID:1287!9.15e-14!4 | |ontology_enrichment_disease=DOID:114!1.67e-26!2;DOID:178!3.98e-14!1;DOID:326!3.98e-14!1;DOID:3978!3.98e-14!1;DOID:3394!3.98e-14!1;DOID:5844!3.98e-14!1;DOID:1287!9.15e-14!4 | ||
|ontology_enrichment_disease_v019=DOID:114;2.56e-98;2!DOID:178;3.99e-50;1!DOID:326;3.99e-50;1!DOID:3978;3.99e-50;1!DOID:3394;3.99e-50;1!DOID:5844;3.99e-50;1!DOID:1287;6.60e-50;4 | |ontology_enrichment_disease_v019=DOID:114;2.56e-98;2!DOID:178;3.99e-50;1!DOID:326;3.99e-50;1!DOID:3978;3.99e-50;1!DOID:3394;3.99e-50;1!DOID:5844;3.99e-50;1!DOID:1287;6.60e-50;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,1.55e-98,2;DOID:178,3.99e-50,1;DOID:326,3.99e-50,1;DOID:3978,3.99e-50,1;DOID:3394,3.99e-50,1;DOID:5844,3.99e-50,1;DOID:1287,5.14e-50,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!1.08e-17!3;UBERON:0009751!1.08e-17!3;UBERON:0000946!1.08e-17!3;UBERON:0002523!1.08e-17!3;UBERON:0005983!1.08e-17!3;UBERON:0002165!1.08e-17!3;UBERON:0002062!1.08e-17!3;UBERON:0007280!1.08e-17!3;UBERON:0003103!6.31e-17!69;UBERON:0007100!1.60e-16!27;UBERON:0002135!4.53e-14!1;UBERON:0005418!5.15e-14!1;UBERON:0001389!5.15e-14!1;UBERON:0000026!5.15e-14!1;UBERON:0008784!5.15e-14!1;UBERON:0006058!5.15e-14!1;UBERON:0003663!5.15e-14!1;UBERON:0001383!5.15e-14!1;UBERON:0004256!5.15e-14!1;UBERON:0002529!5.15e-14!1;UBERON:0004708!5.15e-14!1;UBERON:0002101!5.15e-14!1;UBERON:0004709!5.15e-14!1;UBERON:0003661!5.15e-14!1;UBERON:0002471!5.15e-14!1;UBERON:0004357!5.15e-14!1;UBERON:0009872!5.15e-14!1;UBERON:0004347!5.15e-14!1;UBERON:0005420!5.15e-14!1;UBERON:0005732!5.15e-14!1;UBERON:0006057!5.15e-14!1;UBERON:0000978!5.15e-14!1;UBERON:0002103!5.15e-14!1;UBERON:0001665!5.15e-14!1;UBERON:0003823!5.15e-14!1;UBERON:0000154!5.15e-14!1;UBERON:0005733!5.15e-14!1;UBERON:0005730!5.15e-14!1;UBERON:0002146!9.73e-14!1;UBERON:0005623!9.73e-14!1;UBERON:0007023!1.16e-09!115;UBERON:0002133!1.12e-07!2;UBERON:0001630!1.20e-07!2;UBERON:0005090!1.20e-07!2;UBERON:0000341!1.87e-07!2;UBERON:0003127!1.99e-07!2 | |ontology_enrichment_uberon=UBERON:0003978!1.08e-17!3;UBERON:0009751!1.08e-17!3;UBERON:0000946!1.08e-17!3;UBERON:0002523!1.08e-17!3;UBERON:0005983!1.08e-17!3;UBERON:0002165!1.08e-17!3;UBERON:0002062!1.08e-17!3;UBERON:0007280!1.08e-17!3;UBERON:0003103!6.31e-17!69;UBERON:0007100!1.60e-16!27;UBERON:0002135!4.53e-14!1;UBERON:0005418!5.15e-14!1;UBERON:0001389!5.15e-14!1;UBERON:0000026!5.15e-14!1;UBERON:0008784!5.15e-14!1;UBERON:0006058!5.15e-14!1;UBERON:0003663!5.15e-14!1;UBERON:0001383!5.15e-14!1;UBERON:0004256!5.15e-14!1;UBERON:0002529!5.15e-14!1;UBERON:0004708!5.15e-14!1;UBERON:0002101!5.15e-14!1;UBERON:0004709!5.15e-14!1;UBERON:0003661!5.15e-14!1;UBERON:0002471!5.15e-14!1;UBERON:0004357!5.15e-14!1;UBERON:0009872!5.15e-14!1;UBERON:0004347!5.15e-14!1;UBERON:0005420!5.15e-14!1;UBERON:0005732!5.15e-14!1;UBERON:0006057!5.15e-14!1;UBERON:0000978!5.15e-14!1;UBERON:0002103!5.15e-14!1;UBERON:0001665!5.15e-14!1;UBERON:0003823!5.15e-14!1;UBERON:0000154!5.15e-14!1;UBERON:0005733!5.15e-14!1;UBERON:0005730!5.15e-14!1;UBERON:0002146!9.73e-14!1;UBERON:0005623!9.73e-14!1;UBERON:0007023!1.16e-09!115;UBERON:0002133!1.12e-07!2;UBERON:0001630!1.20e-07!2;UBERON:0005090!1.20e-07!2;UBERON:0000341!1.87e-07!2;UBERON:0003127!1.99e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;3.99e-50;1!UBERON:0007100;2.66e-32;25!UBERON:0002133;7.14e-26;2!UBERON:0003978;9.45e-18;3!UBERON:0000946;9.45e-18;3!UBERON:0000948;4.33e-10;22!UBERON:0003103;1.92e-09;61 | |ontology_enrichment_uberon_v019=UBERON:0002135;3.99e-50;1!UBERON:0007100;2.66e-32;25!UBERON:0002133;7.14e-26;2!UBERON:0003978;9.45e-18;3!UBERON:0000946;9.45e-18;3!UBERON:0000948;4.33e-10;22!UBERON:0003103;1.92e-09;61 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,6.58e-50,1;UBERON:0007100,5.44e-30,27;UBERON:0002133,9.18e-26,2;UBERON:0003978,1.12e-17,3;UBERON:0009751,1.12e-17,3;UBERON:0000946,1.12e-17,3;UBERON:0002523,1.12e-17,3;UBERON:0005983,1.12e-17,3;UBERON:0002165,1.12e-17,3;UBERON:0002062,1.12e-17,3;UBERON:0007280,1.12e-17,3;UBERON:0003103,1.71e-12,68;UBERON:0000948,2.56e-09,24;UBERON:0005498,2.56e-09,24;UBERON:0004140,2.56e-09,24;UBERON:0009881,2.56e-09,24;UBERON:0004141,2.56e-09,24;UBERON:0003084,2.56e-09,24;UBERON:0007005,2.56e-09,24;UBERON:0004139,2.56e-09,24;UBERON:0004291,2.56e-09,24;UBERON:0004797,2.35e-08,7;UBERON:0001009,6.64e-08,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.458320848023367,0,1.39775300349294,1.71690419254628,0.446342914883745,3.62790751428322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.513314034281235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.458320848023367,0,1.39775300349294,1.71690419254628,0.446342914883745,3.62790751428322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.513314034281235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p29@PDE7A | |short_description=p29@PDE7A | ||
}} | }} |
Revision as of 09:29, 21 November 2012
Short description: | p29@PDE7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_PDE7A_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -10bp_to_NM_002603_5end |
EntrezGene: | PDE7A |
HGNC: | 8791 |
UniProt: | Q13946 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mitral valve | 6.58e-50 | 1 |
primary circulatory organ | 5.44e-30 | 27 |
atrioventricular valve | 9.18e-26 | 2 |
valve | 1.12e-17 | 3 |
cardiac mesenchyme | 1.12e-17 | 3 |
cardial valve | 1.12e-17 | 3 |
tunica intima | 1.12e-17 | 3 |
heart layer | 1.12e-17 | 3 |
endocardium | 1.12e-17 | 3 |
endocardial cushion | 1.12e-17 | 3 |
presumptive endocardium | 1.12e-17 | 3 |
compound organ | 1.71e-12 | 68 |
heart | 2.56e-09 | 24 |
primitive heart tube | 2.56e-09 | 24 |
primary heart field | 2.56e-09 | 24 |
anterior lateral plate mesoderm | 2.56e-09 | 24 |
heart tube | 2.56e-09 | 24 |
heart primordium | 2.56e-09 | 24 |
cardiac mesoderm | 2.56e-09 | 24 |
cardiogenic plate | 2.56e-09 | 24 |
heart rudiment | 2.56e-09 | 24 |
blood vessel layer | 2.35e-08 | 7 |
circulatory system | 6.64e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.55e-98 | 2 |
vascular disease | 3.99e-50 | 1 |
ischemia | 3.99e-50 | 1 |
extrinsic cardiomyopathy | 3.99e-50 | 1 |
myocardial ischemia | 3.99e-50 | 1 |
myocardial infarction | 3.99e-50 | 1 |
cardiovascular system disease | 5.14e-50 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.