FFCP PHASE1:Hg19::chr1:16341329..16341345,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000136!4.50e-11!15;CL:0002334!1.53e-08!12;CL:0000057!2.79e-08!75 | |ontology_enrichment_celltype=CL:0000136!4.50e-11!15;CL:0002334!1.53e-08!12;CL:0000057!2.79e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.63e-12;13!CL:0002617;7.22e-11;2!CL:0002580;1.89e-07;3!CL:0000135;2.63e-07;3!CL:0000388;2.63e-07;3!CL:0002615;2.89e-07;3 | |ontology_enrichment_celltype_v019=CL:0000136;1.63e-12;13!CL:0002617;7.22e-11;2!CL:0002580;1.89e-07;3!CL:0000135;2.63e-07;3!CL:0000388;2.63e-07;3!CL:0002615;2.89e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.90e-19,15;CL:0002617,5.95e-11,2;CL:0002580,1.86e-07,3;CL:0002615,2.47e-07,3;CL:0000135,3.28e-07,3;CL:0000388,3.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.39e-10;2 | |ontology_enrichment_development_v019=UBERON:0006965;6.39e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;2.44e-11;2!DOID:0060084;4.83e-07;3!DOID:127;4.83e-07;3 | |ontology_enrichment_disease_v019=DOID:114;2.44e-11;2!DOID:0060084;4.83e-07;3!DOID:127;4.83e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:114,2.45e-11,2;DOID:0060084,4.08e-07,3;DOID:127,4.08e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.25e-10!6;UBERON:0002358!1.25e-10!6;UBERON:0003684!1.25e-10!6;UBERON:0001178!1.25e-10!6;UBERON:0004457!2.19e-08!12;UBERON:0000042!2.19e-08!12;UBERON:0007100!1.44e-07!27 | |ontology_enrichment_uberon=UBERON:0003688!1.25e-10!6;UBERON:0002358!1.25e-10!6;UBERON:0003684!1.25e-10!6;UBERON:0001178!1.25e-10!6;UBERON:0004457!2.19e-08!12;UBERON:0000042!2.19e-08!12;UBERON:0007100!1.44e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.77e-14;25!UBERON:0005406;3.75e-10;2!UBERON:0001013;2.28e-08;14!UBERON:0000310;5.27e-08;10!UBERON:0004151;9.12e-08;3!UBERON:0001723;2.04e-07;3!UBERON:0001033;2.04e-07;3!UBERON:0007846;2.63e-07;3!UBERON:0000043;2.63e-07;3!UBERON:0007845;2.63e-07;3!UBERON:0001443;2.80e-07;11!UBERON:0000948;3.74e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0007100;4.77e-14;25!UBERON:0005406;3.75e-10;2!UBERON:0001013;2.28e-08;14!UBERON:0000310;5.27e-08;10!UBERON:0004151;9.12e-08;3!UBERON:0001723;2.04e-07;3!UBERON:0001033;2.04e-07;3!UBERON:0007846;2.63e-07;3!UBERON:0000043;2.63e-07;3!UBERON:0007845;2.63e-07;3!UBERON:0001443;2.80e-07;11!UBERON:0000948;3.74e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.48e-13,27;UBERON:0005406,2.64e-10,2;UBERON:0001013,1.96e-08,14;UBERON:0000310,4.85e-08,10;UBERON:0004151,9.13e-08,3;UBERON:0003103,1.17e-07,68;UBERON:0001723,1.92e-07,3;UBERON:0001033,1.92e-07,3;UBERON:0010056,1.92e-07,3;UBERON:0001443,2.60e-07,11;UBERON:0007846,3.28e-07,3;UBERON:0000043,3.28e-07,3;UBERON:0007845,3.28e-07,3 | |||
|phase1_expression=3.81524596468169,5.56661362116556,0.281908808191942,6.00439790118782,1.78784437770915,1.74467704820074,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0.168776332241266,1.36411807225678,0,0.184099797284599,0,0.710019185033229,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,0,2.88751792667834,0.118306800039844,0.674338760312407,0,0.330881918197182,0,0.474541238222193,0.404493924480493,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.434343920002738,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.473107245101804,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,2.72918588600655,0.460385919864187,7.85848264412606,0.896974044789907,0.511707249066704,0.64341568457443,2.96836132889982,0,0,0,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.41254749960294,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,2.29160424011684,0,12.1804190304385,33.4796317546525,3.57074331906996,1.61240333968143,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4351252219739,9.93137955548147,0,0.542999601753713,2.5926644736038,1.95952416065645,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0.5013797880454,1.22538230705385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,4.46414416737631,6.06149079778654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47347824872506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,7.12171720906684,1.53994210284371,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0.735444965261716,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,2.23197010900051,0.462175628631418,3.02838593486652,0,0,0,0,0,0,0,0.227336094654718,0,0,0,3.41174371041569,0.476128862927481,0,0,0,0,0,3.70118471424834,3.42233301085281,0,0,1.66330178273007,0,0,0,0,4.69281884806909,0,0,0,1.00636896795513,0 | |phase1_expression=3.81524596468169,5.56661362116556,0.281908808191942,6.00439790118782,1.78784437770915,1.74467704820074,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0.168776332241266,1.36411807225678,0,0.184099797284599,0,0.710019185033229,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,0,2.88751792667834,0.118306800039844,0.674338760312407,0,0.330881918197182,0,0.474541238222193,0.404493924480493,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.434343920002738,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.473107245101804,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,2.72918588600655,0.460385919864187,7.85848264412606,0.896974044789907,0.511707249066704,0.64341568457443,2.96836132889982,0,0,0,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.41254749960294,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,2.29160424011684,0,12.1804190304385,33.4796317546525,3.57074331906996,1.61240333968143,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4351252219739,9.93137955548147,0,0.542999601753713,2.5926644736038,1.95952416065645,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0.5013797880454,1.22538230705385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,4.46414416737631,6.06149079778654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47347824872506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,7.12171720906684,1.53994210284371,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0.735444965261716,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,2.23197010900051,0.462175628631418,3.02838593486652,0,0,0,0,0,0,0,0.227336094654718,0,0,0,3.41174371041569,0.476128862927481,0,0,0,0,0,3.70118471424834,3.42233301085281,0,0,1.66330178273007,0,0,0,0,4.69281884806909,0,0,0,1.00636896795513,0 | ||
|short_description=p@chr1:16341329..16341345,- | |short_description=p@chr1:16341329..16341345,- | ||
}} | }} |
Revision as of 01:43, 21 November 2012
Short description: | p@chr1:16341329..16341345, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:16341329..16341345, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.90e-19 | 15 |
adipocyte of breast | 5.95e-11 | 2 |
preadipocyte of the breast | 1.86e-07 | 3 |
adipocyte of omentum tissue | 2.47e-07 | 3 |
fibrocyte | 3.28e-07 | 3 |
tendon cell | 3.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 7.48e-13 | 27 |
perirenal fat | 2.64e-10 | 2 |
adipose tissue | 1.96e-08 | 14 |
breast | 4.85e-08 | 10 |
cardiac chamber | 9.13e-08 | 3 |
compound organ | 1.17e-07 | 68 |
tongue | 1.92e-07 | 3 |
gustatory system | 1.92e-07 | 3 |
future tongue | 1.92e-07 | 3 |
chest | 2.60e-07 | 11 |
dense regular connective tissue | 3.28e-07 | 3 |
tendon | 3.28e-07 | 3 |
regular connective tissue | 3.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.45e-11 | 2 |
cell type benign neoplasm | 4.08e-07 | 3 |
leiomyoma | 4.08e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.