FFCP PHASE1:Hg19::chr12:6485398..6485410,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002076!3.41e-21!43;CL:0000066!2.84e-19!254;CL:0000223!6.33e-19!59;CL:0002251!4.30e-10!21;CL:0002368!1.19e-08!13 | |ontology_enrichment_celltype=CL:0002076!3.41e-21!43;CL:0000066!2.84e-19!254;CL:0000223!6.33e-19!59;CL:0002251!4.30e-10!21;CL:0002368!1.19e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.06e-25;19!CL:0002577;7.28e-24;3!CL:0002536;9.98e-17;2 | |ontology_enrichment_celltype_v019=CL:0000349;7.06e-25;19!CL:0002577;7.28e-24;3!CL:0002536;9.98e-17;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.34e-25,19;CL:0002577,4.58e-24,3;CL:0002536,4.91e-17,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.56e-16!106;DOID:0050687!2.72e-11!143;DOID:1749!3.63e-09!14;DOID:299!9.69e-07!25 | |ontology_enrichment_disease=DOID:305!2.56e-16!106;DOID:0050687!2.72e-11!143;DOID:1749!3.63e-09!14;DOID:299!9.69e-07!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.74e-15!169;UBERON:0000925!1.74e-15!169;UBERON:0006595!1.74e-15!169;UBERON:0000077!2.89e-13!130;UBERON:0001007!1.39e-11!155;UBERON:0001555!1.39e-11!155;UBERON:0007026!1.39e-11!155;UBERON:0004921!1.79e-11!129;UBERON:0004185!1.79e-11!129;UBERON:0005156!7.97e-10!59;UBERON:0000990!7.97e-10!59;UBERON:0005631!2.53e-09!14;UBERON:0000158!2.53e-09!14;UBERON:0001004!4.95e-09!72;UBERON:0003101!1.21e-08!22;UBERON:0000079!1.21e-08!22;UBERON:0005153!2.65e-08!37;UBERON:0000065!2.93e-08!53;UBERON:0001041!1.21e-07!98;UBERON:0003124!1.50e-07!7;UBERON:0004175!1.58e-07!25;UBERON:0000922!1.94e-07!612;UBERON:0003133!2.12e-07!48;UBERON:0000466!2.96e-07!126;UBERON:0000344!4.15e-07!12;UBERON:0000062!4.38e-07!511;UBERON:0005911!9.05e-07!82 | |ontology_enrichment_uberon=UBERON:0004119!1.74e-15!169;UBERON:0000925!1.74e-15!169;UBERON:0006595!1.74e-15!169;UBERON:0000077!2.89e-13!130;UBERON:0001007!1.39e-11!155;UBERON:0001555!1.39e-11!155;UBERON:0007026!1.39e-11!155;UBERON:0004921!1.79e-11!129;UBERON:0004185!1.79e-11!129;UBERON:0005156!7.97e-10!59;UBERON:0000990!7.97e-10!59;UBERON:0005631!2.53e-09!14;UBERON:0000158!2.53e-09!14;UBERON:0001004!4.95e-09!72;UBERON:0003101!1.21e-08!22;UBERON:0000079!1.21e-08!22;UBERON:0005153!2.65e-08!37;UBERON:0000065!2.93e-08!53;UBERON:0001041!1.21e-07!98;UBERON:0003124!1.50e-07!7;UBERON:0004175!1.58e-07!25;UBERON:0000922!1.94e-07!612;UBERON:0003133!2.12e-07!48;UBERON:0000466!2.96e-07!126;UBERON:0000344!4.15e-07!12;UBERON:0000062!4.38e-07!511;UBERON:0005911!9.05e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.75e-19;24!UBERON:0001987;4.66e-18;4!UBERON:0005631;1.37e-12;10!UBERON:0000158;1.37e-12;10!UBERON:0000305;1.41e-10;7!UBERON:0007195;5.97e-09;1!UBERON:0002171;5.97e-09;1!UBERON:0006518;5.97e-09;1!UBERON:0008949;5.97e-09;1!UBERON:0000101;5.97e-09;1!UBERON:0002167;5.97e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.75e-19;24!UBERON:0001987;4.66e-18;4!UBERON:0005631;1.37e-12;10!UBERON:0000158;1.37e-12;10!UBERON:0000305;1.41e-10;7!UBERON:0007195;5.97e-09;1!UBERON:0002171;5.97e-09;1!UBERON:0006518;5.97e-09;1!UBERON:0008949;5.97e-09;1!UBERON:0000101;5.97e-09;1!UBERON:0002167;5.97e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.00e-26,14;UBERON:0000158,2.00e-26,14;UBERON:0000478,1.61e-19,24;UBERON:0001987,3.29e-18,4;UBERON:0004340,3.29e-18,4;UBERON:0003124,8.10e-18,7;UBERON:0000305,9.35e-11,7;UBERON:0004871,1.80e-09,8;UBERON:0002171,5.31e-09,1;UBERON:0006518,5.31e-09,1;UBERON:0008949,5.31e-09,1;UBERON:0000101,5.31e-09,1;UBERON:0002167,5.31e-09,1;UBERON:0007195,7.85e-09,1 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0.737201809504527,0,1.96597234917155,4.48403862988371,0,0.331397375727916,0,0,0,0,0,0.612002073732759,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.443458794925128,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.365921118388786,0.530119073285941,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,1.10689594688802,0.343135620597051,0,0,0,0.462942225792648,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.626909658919938,1.16253575405585,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,1.81876542867756,3.32870879020994,1.20956117331872,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,0.802025881213139,0.920809889358963,0,0,0,0,0.15403067420883,0,1.46139224653261,0,0,0,0,0,1.08378575017541,0,0.764628819135115,0,0.447749509444357,0,0,0,0.328014645699706,0.650756789328606,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,1.91419068741876,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0.670302275535787,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,1.43246690842614,0,0.614321404198464,0,0,0,0,0.844501632511974,0.19924798825107,0,0,0.306806047506464,0,0,0.0898683511473268,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,1.46909527343233,0.565412285735763,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0.284609546029793,0,2.77695581336209,0.685946781900644,0.957651272384428,0.698906672968121,0,0.19351266257817,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0.782205530939212,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0.707082103850386,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0.272406812223151,0.160753148465019,0.275078873194468,0,0,0,0,0,2.12775409707835,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,1.17466153824464,0.314408610199332,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,1.22021956690538,0.0620964029413835,0,0.37494122388632,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.589848616738702,0.183428598521679,0.462102664601353,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0.455324382702595,0.266107110487916,0,0.514464028312255,0,0.0657727735628491,0.590969204419841,0.111231401892069,0.706437835654626,0,0.840816489941367,0,0,0,0.285906176706625,0,0.23248285073625,0,0,0,0.17071847709395,2.07377898544228,0,0,0,0.846774100381858,0.68732060563215,0,0,0.335566295393377,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0.240724100067505,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0.26721740526556,0.643264296743914,0.250707539292375,0.151557396436479,0,0,0,0,0.23806443146374,0,0.434523000071005,0,4.39165392119338,0,0,0,0.202056159043763,1.36272190246085,0,0.244209805832924,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0.813792356631477,0.665756774185513,0,0 | |phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0.737201809504527,0,1.96597234917155,4.48403862988371,0,0.331397375727916,0,0,0,0,0,0.612002073732759,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.443458794925128,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.365921118388786,0.530119073285941,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,1.10689594688802,0.343135620597051,0,0,0,0.462942225792648,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.626909658919938,1.16253575405585,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,1.81876542867756,3.32870879020994,1.20956117331872,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,0.802025881213139,0.920809889358963,0,0,0,0,0.15403067420883,0,1.46139224653261,0,0,0,0,0,1.08378575017541,0,0.764628819135115,0,0.447749509444357,0,0,0,0.328014645699706,0.650756789328606,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,1.91419068741876,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0.670302275535787,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,1.43246690842614,0,0.614321404198464,0,0,0,0,0.844501632511974,0.19924798825107,0,0,0.306806047506464,0,0,0.0898683511473268,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,1.46909527343233,0.565412285735763,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0.284609546029793,0,2.77695581336209,0.685946781900644,0.957651272384428,0.698906672968121,0,0.19351266257817,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0.782205530939212,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0.707082103850386,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0.272406812223151,0.160753148465019,0.275078873194468,0,0,0,0,0,2.12775409707835,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,1.17466153824464,0.314408610199332,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,1.22021956690538,0.0620964029413835,0,0.37494122388632,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.589848616738702,0.183428598521679,0.462102664601353,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0.455324382702595,0.266107110487916,0,0.514464028312255,0,0.0657727735628491,0.590969204419841,0.111231401892069,0.706437835654626,0,0.840816489941367,0,0,0,0.285906176706625,0,0.23248285073625,0,0,0,0.17071847709395,2.07377898544228,0,0,0,0.846774100381858,0.68732060563215,0,0,0.335566295393377,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0.240724100067505,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0.26721740526556,0.643264296743914,0.250707539292375,0.151557396436479,0,0,0,0,0.23806443146374,0,0.434523000071005,0,4.39165392119338,0,0,0,0.202056159043763,1.36272190246085,0,0.244209805832924,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0.813792356631477,0.665756774185513,0,0 | ||
|short_description=p12@SCNN1A | |short_description=p12@SCNN1A | ||
}} | }} |
Revision as of 19:50, 20 November 2012
Short description: | p12@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SCNN1A_5end |
Coexpression cluster: | C2229_Amniotic_Placental_lung_thyroid_kidney_Small_testicular |
Association with transcript: | -204bp_to_ENST00000536411_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.34e-25 | 19 |
placental epithelial cell | 4.58e-24 | 3 |
amniotic epithelial cell | 4.91e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.00e-26 | 14 |
membranous layer | 2.00e-26 | 14 |
extraembryonic structure | 1.61e-19 | 24 |
placenta | 3.29e-18 | 4 |
allantois | 3.29e-18 | 4 |
chorion | 8.10e-18 | 7 |
amnion | 9.35e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.80e-09 | 8 |
lower lobe of right lung | 5.31e-09 | 1 |
right lung lobe | 5.31e-09 | 1 |
lower lobe of lung | 5.31e-09 | 1 |
lobe of lung | 5.31e-09 | 1 |
right lung | 5.31e-09 | 1 |
stroma of bone marrow | 7.85e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.