FFCP PHASE1:Hg19::chr1:202172848..202172894,+: Difference between revisions
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|ontology_enrichment_development_v019=CL:0000790;6.66e-43;18!CL:0000051;1.14e-10;53 | |ontology_enrichment_development_v019=CL:0000790;6.66e-43;18!CL:0000051;1.14e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.23e-20!15;UBERON:0000179!2.23e-20!15;UBERON:0000463!2.23e-20!15;UBERON:0007023!1.15e-17!115 | |ontology_enrichment_uberon=UBERON:0000178!2.23e-20!15;UBERON:0000179!2.23e-20!15;UBERON:0000463!2.23e-20!15;UBERON:0007023!1.15e-17!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.14e-42;15!UBERON:0000179;1.14e-42;15!UBERON:0000463;1.14e-42;15!UBERON:0002390;8.49e-18;32!UBERON:0002193;5.17e-12;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.14e-42;15!UBERON:0000179;1.14e-42;15!UBERON:0000463;1.14e-42;15!UBERON:0002390;8.49e-18;32!UBERON:0002193;5.17e-12;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.08e-42,15;UBERON:0000179,1.08e-42,15;UBERON:0000463,1.08e-42,15;UBERON:0002390,9.91e-10,98;UBERON:0003061,9.91e-10,98;UBERON:0002193,1.13e-09,108 | |||
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| ||
|short_description=p2@LGR6 | |short_description=p2@LGR6 | ||
}} | }} |
Revision as of 15:24, 20 November 2012
Short description: | p2@LGR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LGR6_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_ENST00000255432, ENST00000367277_5end |
EntrezGene: | LGR6 |
HGNC: | 19719 |
UniProt: | Q5T508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.47e-52 | 11 |
mature alpha-beta T cell | 6.67e-43 | 18 |
alpha-beta T cell | 6.67e-43 | 18 |
immature T cell | 6.67e-43 | 18 |
mature T cell | 6.67e-43 | 18 |
immature alpha-beta T cell | 6.67e-43 | 18 |
T cell | 4.40e-30 | 25 |
pro-T cell | 4.40e-30 | 25 |
lymphoid lineage restricted progenitor cell | 1.77e-20 | 52 |
lymphocyte | 5.08e-20 | 53 |
common lymphoid progenitor | 5.08e-20 | 53 |
leukocyte | 8.48e-18 | 136 |
hematopoietic stem cell | 2.69e-17 | 168 |
nongranular leukocyte | 1.31e-16 | 115 |
hematopoietic cell | 4.31e-16 | 177 |
natural killer cell | 4.40e-16 | 3 |
pro-NK cell | 4.40e-16 | 3 |
basophil | 3.74e-15 | 3 |
single nucleate cell | 6.63e-15 | 3 |
mononuclear cell | 6.63e-15 | 3 |
hematopoietic oligopotent progenitor cell | 5.17e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.17e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 2.61e-11 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.08e-42 | 15 |
haemolymphatic fluid | 1.08e-42 | 15 |
organism substance | 1.08e-42 | 15 |
hematopoietic system | 9.91e-10 | 98 |
blood island | 9.91e-10 | 98 |
hemolymphoid system | 1.13e-09 | 108 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.