FFCP PHASE1:Hg19::chr5:138629349..138629386,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!1.23e-15!140;CL:0000037!4.66e-12!172;CL:0000566!4.66e-12!172;CL:0002031!3.47e-11!124;CL:0002087!1.60e-10!119;CL:0002032!2.29e-10!165;CL:0000837!2.29e-10!165;CL:0000988!3.26e-10!182;CL:0000542!5.28e-10!53;CL:0000051!5.28e-10!53;CL:0000838!9.49e-10!52 | |ontology_enrichment_celltype=CL:0000738!1.23e-15!140;CL:0000037!4.66e-12!172;CL:0000566!4.66e-12!172;CL:0002031!3.47e-11!124;CL:0002087!1.60e-10!119;CL:0002032!2.29e-10!165;CL:0000837!2.29e-10!165;CL:0000988!3.26e-10!182;CL:0000542!5.28e-10!53;CL:0000051!5.28e-10!53;CL:0000838!9.49e-10!52 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.46e-16,136;CL:0000037,1.54e-12,168;CL:0002031,8.98e-12,120;CL:0002087,4.24e-11,115;CL:0000988,5.18e-11,177;CL:0002032,8.31e-11,161;CL:0000837,8.31e-11,161;CL:0000542,5.28e-10,53;CL:0000051,5.28e-10,53;CL:0000838,9.49e-10,52 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@MATR3 | |short_description=p3@MATR3 | ||
}} | }} |
Revision as of 03:01, 20 November 2012
Short description: | p3@MATR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MATR3_5end |
Coexpression cluster: | C2804_parietal_Mast_Neurons_occipital_Neural_Fibroblast_pineal |
Association with transcript: | 0bp_to_ENST00000512876, ENST00000513678, uc003ldx.2, uc010jfc.2_5end |
EntrezGene: | MATR3 |
HGNC: | 6912 |
UniProt: | D6RE02D6RAY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.46e-16 | 136 |
hematopoietic stem cell | 1.54e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 8.98e-12 | 120 |
nongranular leukocyte | 4.24e-11 | 115 |
hematopoietic cell | 5.18e-11 | 177 |
hematopoietic oligopotent progenitor cell | 8.31e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.31e-11 | 161 |
lymphocyte | 5.28e-10 | 53 |
common lymphoid progenitor | 5.28e-10 | 53 |
lymphoid lineage restricted progenitor cell | 9.49e-10 | 52 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.93e-24 | 81 |
neural tube | 1.61e-22 | 56 |
neural rod | 1.61e-22 | 56 |
future spinal cord | 1.61e-22 | 56 |
neural keel | 1.61e-22 | 56 |
nervous system | 2.51e-22 | 89 |
regional part of nervous system | 1.31e-21 | 53 |
regional part of brain | 1.31e-21 | 53 |
regional part of forebrain | 2.67e-21 | 41 |
forebrain | 2.67e-21 | 41 |
anterior neural tube | 2.67e-21 | 41 |
future forebrain | 2.67e-21 | 41 |
brain grey matter | 7.84e-19 | 34 |
gray matter | 7.84e-19 | 34 |
telencephalon | 9.84e-19 | 34 |
brain | 3.95e-18 | 68 |
future brain | 3.95e-18 | 68 |
cerebral hemisphere | 4.76e-18 | 32 |
regional part of telencephalon | 8.40e-18 | 32 |
cerebral cortex | 2.63e-14 | 25 |
pallium | 2.63e-14 | 25 |
regional part of cerebral cortex | 3.83e-14 | 22 |
neurectoderm | 5.95e-14 | 86 |
neural plate | 7.04e-14 | 82 |
presumptive neural plate | 7.04e-14 | 82 |
pre-chordal neural plate | 2.77e-13 | 61 |
neocortex | 3.21e-13 | 20 |
adult organism | 3.42e-11 | 114 |
ecto-epithelium | 4.32e-07 | 104 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.