FFCP PHASE1:Hg19::chr5:173594178..173594183,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000095!9.04e-07!17;CL:0000123!9.04e-07!17 | |ontology_enrichment_celltype=CL:0000095!9.04e-07!17;CL:0000123!9.04e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.53e-09;3!CL:0000346;1.53e-09;3!CL:1000428;1.53e-09;3!CL:0000243;8.47e-07;15!CL:0000125;8.47e-07;15 | |ontology_enrichment_celltype_v019=CL:0000322;1.53e-09;3!CL:0000346;1.53e-09;3!CL:1000428;1.53e-09;3!CL:0000243;8.47e-07;15!CL:0000125;8.47e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.54e-09,3;CL:0000346,1.67e-09,3;CL:1000428,1.67e-09,3;CL:0000243,7.87e-07,15;CL:0000125,7.87e-07,15;CL:0000030,7.87e-07,15;CL:0000339,7.87e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.17e-10;10!CL:0000339;8.47e-07;15 | |ontology_enrichment_development_v019=UBERON:0006238;5.17e-10;10!CL:0000339;8.47e-07;15 | ||
|ontology_enrichment_disease=DOID:162!1.29e-23!235;DOID:14566!8.53e-23!239;DOID:0050686!5.28e-15!137;DOID:0050687!4.84e-10!143;DOID:2531!2.29e-09!51;DOID:0060083!2.29e-09!51;DOID:3095!5.48e-09!22;DOID:2994!5.48e-09!22;DOID:171!2.77e-08!10;DOID:1240!1.76e-07!39;DOID:3093!7.01e-07!11 | |ontology_enrichment_disease=DOID:162!1.29e-23!235;DOID:14566!8.53e-23!239;DOID:0050686!5.28e-15!137;DOID:0050687!4.84e-10!143;DOID:2531!2.29e-09!51;DOID:0060083!2.29e-09!51;DOID:3095!5.48e-09!22;DOID:2994!5.48e-09!22;DOID:171!2.77e-08!10;DOID:1240!1.76e-07!39;DOID:3093!7.01e-07!11 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.21e-13;2!DOID:1036;2.65e-13;8!DOID:3093;2.95e-09;11 | |ontology_enrichment_disease_v019=DOID:3910;1.21e-13;2!DOID:1036;2.65e-13;8!DOID:3093;2.95e-09;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.21e-13,2;DOID:1036,2.82e-13,8;DOID:3093,2.66e-09,11 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.21e-13;2!UBERON:0002173;1.21e-13;2!UBERON:0002186;1.21e-13;2!UBERON:0004821;1.53e-09;3!UBERON:0007499;1.53e-09;3!UBERON:0003215;1.53e-09;3!UBERON:0010368;1.53e-09;3!UBERON:0009911;1.53e-09;3!UBERON:0002299;1.53e-09;3!UBERON:0000412;1.53e-09;3!UBERON:0001992;1.53e-09;3!UBERON:0006524;1.53e-09;3!UBERON:0008874;1.53e-09;3!UBERON:0002169;1.53e-09;3!UBERON:0004894;1.53e-09;3!UBERON:0009856;1.80e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;1.21e-13;2!UBERON:0002173;1.21e-13;2!UBERON:0002186;1.21e-13;2!UBERON:0004821;1.53e-09;3!UBERON:0007499;1.53e-09;3!UBERON:0003215;1.53e-09;3!UBERON:0010368;1.53e-09;3!UBERON:0009911;1.53e-09;3!UBERON:0002299;1.53e-09;3!UBERON:0000412;1.53e-09;3!UBERON:0001992;1.53e-09;3!UBERON:0006524;1.53e-09;3!UBERON:0008874;1.53e-09;3!UBERON:0002169;1.53e-09;3!UBERON:0004894;1.53e-09;3!UBERON:0009856;1.80e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.21e-13,2;UBERON:0002173,1.21e-13,2;UBERON:0002186,1.21e-13,2;UBERON:0004821,1.54e-09,3;UBERON:0003215,1.54e-09,3;UBERON:0010368,1.54e-09,3;UBERON:0009911,1.54e-09,3;UBERON:0002299,1.54e-09,3;UBERON:0006524,1.54e-09,3;UBERON:0008874,1.54e-09,3;UBERON:0002169,1.54e-09,3;UBERON:0004894,1.54e-09,3;UBERON:0000412,1.67e-09,3;UBERON:0001992,1.67e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0.213425530045242,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0.687010689511529,0,0.223676107892416,0.166849141711909,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0,1.42068073403207,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0.166211681900156,0,0,0,1.13852239634511,0,0,0.652931232636591,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0.411125773940253,0.596143835108969,0,0,0,0,0.599428828746391,0.72045208577053,0,0.343189995723929,0,0,0,2.58217991539867,1.67364554099733,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,1.64185041498678,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.655219697692825,0,0,0.19998739585493,0,0,0,0,0,0,0.639471856518258,0.323474434190045,0,0.54604819096007,0.33946505990805,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.397832444232549,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0.236387681767936,0.333694205676207,0,0,0,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.795803100645473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,3.60576387480195,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,2.01837352645104,0,0,0,0,0,0,0,0.162806537221949,0,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0.213425530045242,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0.687010689511529,0,0.223676107892416,0.166849141711909,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0,1.42068073403207,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0.166211681900156,0,0,0,1.13852239634511,0,0,0.652931232636591,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0.411125773940253,0.596143835108969,0,0,0,0,0.599428828746391,0.72045208577053,0,0.343189995723929,0,0,0,2.58217991539867,1.67364554099733,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,1.64185041498678,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.655219697692825,0,0,0.19998739585493,0,0,0,0,0,0,0.639471856518258,0.323474434190045,0,0.54604819096007,0.33946505990805,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.397832444232549,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0.236387681767936,0.333694205676207,0,0,0,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.795803100645473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,3.60576387480195,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,2.01837352645104,0,0,0,0,0,0,0,0.162806537221949,0,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr5:173594178..173594183,+ | |short_description=p@chr5:173594178..173594183,+ | ||
}} | }} |
Revision as of 01:41, 20 November 2012
Short description: | p@chr5:173594178..173594183, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:173594178..173594183, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.54e-09 | 3 |
hair follicle dermal papilla cell | 1.67e-09 | 3 |
stem cell of epidermis | 1.67e-09 | 3 |
glial cell (sensu Vertebrata) | 7.87e-07 | 15 |
glial cell | 7.87e-07 | 15 |
glioblast | 7.87e-07 | 15 |
glioblast (sensu Vertebrata) | 7.87e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.21e-13 | 2 |
alveolar duct | 1.21e-13 | 2 |
bronchiole | 1.21e-13 | 2 |
pulmonary alveolus epithelium | 1.54e-09 | 3 |
alveolus | 1.54e-09 | 3 |
pulmonary lobule | 1.54e-09 | 3 |
lobule | 1.54e-09 | 3 |
alveolus of lung | 1.54e-09 | 3 |
alveolar system | 1.54e-09 | 3 |
pulmonary acinus | 1.54e-09 | 3 |
alveolar sac | 1.54e-09 | 3 |
alveolar wall | 1.54e-09 | 3 |
dermal papilla | 1.67e-09 | 3 |
papillary layer of dermis | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.21e-13 | 2 |
chronic leukemia | 2.82e-13 | 8 |
nervous system cancer | 2.66e-09 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.