FFCP PHASE1:Hg19::chr8:103547778..103547783,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0002368!8.65e-10!13;CL:0002202!2.38e-09!9;CL:0002632!2.38e-09!9;CL:0000066!3.45e-07!254 | |ontology_enrichment_celltype=CL:0002368!8.65e-10!13;CL:0002202!2.38e-09!9;CL:0002632!2.38e-09!9;CL:0000066!3.45e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002202;2.04e-35;9!CL:0002632;2.04e-35;9!CL:0000307;1.95e-27;3!CL:0002368;1.08e-24;13!CL:0000746;5.01e-08;3!CL:0000322;6.78e-08;3!CL:0002328;6.78e-08;3 | |ontology_enrichment_celltype_v019=CL:0002202;2.04e-35;9!CL:0002632;2.04e-35;9!CL:0000307;1.95e-27;3!CL:0002368;1.08e-24;13!CL:0000746;5.01e-08;3!CL:0000322;6.78e-08;3!CL:0002328;6.78e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.37e-35,9;CL:0002632,1.37e-35,9;CL:0000068,2.08e-27,3;CL:0000069,2.08e-27,3;CL:0000307,2.08e-27,3;CL:0000377,2.08e-27,3;CL:0002368,8.17e-25,13;CL:0002076,5.01e-12,42;CL:0000223,9.79e-09,58;CL:0000746,4.84e-08,3;CL:0000513,4.84e-08,3;CL:0002328,5.54e-08,3;CL:0000322,5.93e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.95e-27;3!UBERON:0008814;1.82e-11;2!UBERON:0010056;1.82e-11;2!CL:0000513;5.01e-08;3!CL:0000223;1.11e-07;58 | |ontology_enrichment_development_v019=CL:0000377;1.95e-27;3!UBERON:0008814;1.82e-11;2!UBERON:0010056;1.82e-11;2!CL:0000513;5.01e-08;3!CL:0000223;1.11e-07;58 | ||
|ontology_enrichment_disease=DOID:162!3.33e-19!235;DOID:14566!5.15e-19!239;DOID:0050687!4.37e-13!143;DOID:305!1.29e-11!106;DOID:0050686!8.34e-07!137 | |ontology_enrichment_disease=DOID:162!3.33e-19!235;DOID:14566!5.15e-19!239;DOID:0050687!4.37e-13!143;DOID:305!1.29e-11!106;DOID:0050686!8.34e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:3910;3.34e-11;2!DOID:4468;3.34e-11;2 | |ontology_enrichment_disease_v019=DOID:3910;3.34e-11;2!DOID:4468;3.34e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,2.73e-11,2;DOID:4468,4.09e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000065!2.28e-08!53;UBERON:0000072!2.88e-08!46;UBERON:0008947!6.65e-07!38;UBERON:0003258!6.65e-07!38 | |ontology_enrichment_uberon=UBERON:0000065!2.28e-08!53;UBERON:0000072!2.88e-08!46;UBERON:0008947!6.65e-07!38;UBERON:0003258!6.65e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.80e-21;15!UBERON:0001558;1.80e-21;15!UBERON:0003126;2.31e-12;7!UBERON:0001005;2.31e-12;7!UBERON:0004903;3.34e-11;2!UBERON:0002173;3.34e-11;2!UBERON:0002186;3.34e-11;2!UBERON:0005178;1.24e-09;34!UBERON:0002224;1.24e-09;34!UBERON:0001723;4.52e-08;3!UBERON:0001033;4.52e-08;3!UBERON:0005181;5.15e-08;35!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0004815;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0002031;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3!UBERON:0000072;7.73e-08;37!UBERON:0000065;2.88e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0007196;1.80e-21;15!UBERON:0001558;1.80e-21;15!UBERON:0003126;2.31e-12;7!UBERON:0001005;2.31e-12;7!UBERON:0004903;3.34e-11;2!UBERON:0002173;3.34e-11;2!UBERON:0002186;3.34e-11;2!UBERON:0005178;1.24e-09;34!UBERON:0002224;1.24e-09;34!UBERON:0001723;4.52e-08;3!UBERON:0001033;4.52e-08;3!UBERON:0005181;5.15e-08;35!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0004815;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0002031;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3!UBERON:0000072;7.73e-08;37!UBERON:0000065;2.88e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.42e-21,15;UBERON:0001558,1.42e-21,15;UBERON:0003126,2.37e-12,7;UBERON:0001005,2.37e-12,7;UBERON:0004903,2.73e-11,2;UBERON:0002173,2.73e-11,2;UBERON:0002186,2.73e-11,2;UBERON:0000072,9.25e-11,47;UBERON:0005178,9.60e-10,34;UBERON:0002224,9.60e-10,34;UBERON:0005181,1.78e-09,35;UBERON:0000065,2.23e-09,54;UBERON:0008947,9.42e-09,38;UBERON:0003258,9.42e-09,38;UBERON:0001723,4.52e-08,3;UBERON:0001033,4.52e-08,3;UBERON:0010056,4.52e-08,3;UBERON:0004815,5.54e-08,3;UBERON:0002031,5.54e-08,3;UBERON:0004821,5.93e-08,3;UBERON:0003215,5.93e-08,3;UBERON:0010368,5.93e-08,3;UBERON:0009911,5.93e-08,3;UBERON:0002299,5.93e-08,3;UBERON:0006524,5.93e-08,3;UBERON:0008874,5.93e-08,3;UBERON:0002169,5.93e-08,3;UBERON:0004894,5.93e-08,3;UBERON:0003103,1.88e-07,68;UBERON:0001004,7.43e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,1.84877005083394,0.0774672005803016,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.275673144969061,0,0,0,0,0.495854746082934,0,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.568967241427498,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0,0,0,0,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0,0,0.687944129886466,0.290268993867255,0.438535902517113,0.164230914106418,0,0,0,1.37041924646751,0.794858446811959,0,0,0.240476460754601,0,0.39961921916426,0.288180834308212,0,0,0,0.248505071130865,0,0.135904206073614,0,0,0.577901179803038,0,0,0,0.859530882839914,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846733320657845,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0.082092520749339,0.511164065356265,0,0,0,0.387848869084652,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0.314108192500469,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0.800055529326307,0.686791410365586,0,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0.39997479170986,0,0.344429959321631,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.183428598521679,4.50550097986319,0,0.690359926060101,0,0,0,0,0,0.982631505060581,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.576169937778896,0,0,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0,0,0.581207126840626,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.655593431782173,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,1.84877005083394,0.0774672005803016,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.275673144969061,0,0,0,0,0.495854746082934,0,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.568967241427498,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0,0,0,0,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0,0,0.687944129886466,0.290268993867255,0.438535902517113,0.164230914106418,0,0,0,1.37041924646751,0.794858446811959,0,0,0.240476460754601,0,0.39961921916426,0.288180834308212,0,0,0,0.248505071130865,0,0.135904206073614,0,0,0.577901179803038,0,0,0,0.859530882839914,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846733320657845,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0.082092520749339,0.511164065356265,0,0,0,0.387848869084652,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0.314108192500469,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0.800055529326307,0.686791410365586,0,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0.39997479170986,0,0.344429959321631,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.183428598521679,4.50550097986319,0,0.690359926060101,0,0,0,0,0,0.982631505060581,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.576169937778896,0,0,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0,0,0.581207126840626,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.655593431782173,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:103547778..103547783,- | |short_description=p@chr8:103547778..103547783,- | ||
}} | }} |
Revision as of 15:13, 19 November 2012
Short description: | p@chr8:103547778..103547783, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:103547778..103547783, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.37e-35 | 9 |
epithelial cell of lower respiratory tract | 1.37e-35 | 9 |
duct epithelial cell | 2.08e-27 | 3 |
branched duct epithelial cell | 2.08e-27 | 3 |
tracheal epithelial cell | 2.08e-27 | 3 |
tracheoblast | 2.08e-27 | 3 |
respiratory epithelial cell | 8.17e-25 | 13 |
endo-epithelial cell | 5.01e-12 | 42 |
endodermal cell | 9.79e-09 | 58 |
cardiac muscle cell | 4.84e-08 | 3 |
cardiac muscle myoblast | 4.84e-08 | 3 |
bronchial epithelial cell | 5.54e-08 | 3 |
pneumocyte | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.42e-21 | 15 |
lower respiratory tract | 1.42e-21 | 15 |
trachea | 2.37e-12 | 7 |
respiratory airway | 2.37e-12 | 7 |
bronchoalveolar duct junction | 2.73e-11 | 2 |
alveolar duct | 2.73e-11 | 2 |
bronchiole | 2.73e-11 | 2 |
segment of respiratory tract | 9.25e-11 | 47 |
thoracic cavity element | 9.60e-10 | 34 |
thoracic cavity | 9.60e-10 | 34 |
thoracic segment organ | 1.78e-09 | 35 |
respiratory tract | 2.23e-09 | 54 |
respiratory primordium | 9.42e-09 | 38 |
endoderm of foregut | 9.42e-09 | 38 |
tongue | 4.52e-08 | 3 |
gustatory system | 4.52e-08 | 3 |
future tongue | 4.52e-08 | 3 |
lower respiratory tract epithelium | 5.54e-08 | 3 |
epithelium of bronchus | 5.54e-08 | 3 |
pulmonary alveolus epithelium | 5.93e-08 | 3 |
alveolus | 5.93e-08 | 3 |
pulmonary lobule | 5.93e-08 | 3 |
lobule | 5.93e-08 | 3 |
alveolus of lung | 5.93e-08 | 3 |
alveolar system | 5.93e-08 | 3 |
pulmonary acinus | 5.93e-08 | 3 |
alveolar sac | 5.93e-08 | 3 |
alveolar wall | 5.93e-08 | 3 |
compound organ | 1.88e-07 | 68 |
respiratory system | 7.43e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.73e-11 | 2 |
clear cell adenocarcinoma | 4.09e-11 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.