FFCP PHASE1:Hg19::chr2:51255218..51255229,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.74e-50;2!CL:0000242;2.74e-50;2!CL:0000312;4.21e-21;5!CL:0000240;7.67e-18;6!CL:0000311;7.67e-18;6!CL:0000079;7.67e-18;6!CL:0000237;7.67e-18;6!CL:0000362;2.19e-12;9!CL:0002159;1.86e-08;14 | |ontology_enrichment_celltype_v019=CL:0000123;2.74e-50;2!CL:0000242;2.74e-50;2!CL:0000312;4.21e-21;5!CL:0000240;7.67e-18;6!CL:0000311;7.67e-18;6!CL:0000079;7.67e-18;6!CL:0000237;7.67e-18;6!CL:0000362;2.19e-12;9!CL:0002159;1.86e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.74e-50,2;CL:0000312,4.21e-21,5;CL:0000240,7.67e-18,6;CL:0000311,7.67e-18,6;CL:0000079,7.67e-18,6;CL:0000237,7.67e-18,6;CL:0000036,7.67e-18,6;CL:0000357,7.67e-18,6;CL:0000114,7.67e-18,6;CL:0000362,2.19e-12,9;CL:0002159,1.86e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;7.67e-18;6!CL:0000114;7.67e-18;6 | |ontology_enrichment_development_v019=CL:0000357;7.67e-18;6!CL:0000114;7.67e-18;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;7.14e-26;4!DOID:1325;1.91e-15;7!DOID:3904;1.91e-15;7!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | |ontology_enrichment_disease_v019=DOID:5409;7.14e-26;4!DOID:1325;1.91e-15;7!DOID:3904;1.91e-15;7!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,7.14e-26,4;DOID:1325,1.91e-15,7;DOID:3904,1.91e-15,7;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15;DOID:0050615,1.54e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004733!1.08e-12!12;UBERON:0002028!1.08e-12!12;UBERON:0007277!1.08e-12!12;UBERON:0004732!9.80e-12!13;UBERON:0001282!1.10e-10!1;UBERON:0009842!1.10e-10!1;UBERON:0003704!1.10e-10!1;UBERON:0001171!1.10e-10!1;UBERON:0001172!1.10e-10!1;UBERON:0003076!3.37e-10!15;UBERON:0003057!3.37e-10!15;UBERON:0002680!6.08e-10!9;UBERON:0001895!6.08e-10!9;UBERON:0010092!6.08e-10!9;UBERON:0001017!8.97e-08!82;UBERON:0000955!2.01e-07!69;UBERON:0006238!2.01e-07!69;UBERON:0005743!2.30e-07!86;UBERON:0002037!3.15e-07!6;UBERON:0006215!3.15e-07!6;UBERON:0001049!3.52e-07!57;UBERON:0005068!3.52e-07!57;UBERON:0006241!3.52e-07!57;UBERON:0007135!3.52e-07!57;UBERON:0002616!6.46e-07!59 | |ontology_enrichment_uberon=UBERON:0004733!1.08e-12!12;UBERON:0002028!1.08e-12!12;UBERON:0007277!1.08e-12!12;UBERON:0004732!9.80e-12!13;UBERON:0001282!1.10e-10!1;UBERON:0009842!1.10e-10!1;UBERON:0003704!1.10e-10!1;UBERON:0001171!1.10e-10!1;UBERON:0001172!1.10e-10!1;UBERON:0003076!3.37e-10!15;UBERON:0003057!3.37e-10!15;UBERON:0002680!6.08e-10!9;UBERON:0001895!6.08e-10!9;UBERON:0010092!6.08e-10!9;UBERON:0001017!8.97e-08!82;UBERON:0000955!2.01e-07!69;UBERON:0006238!2.01e-07!69;UBERON:0005743!2.30e-07!86;UBERON:0002037!3.15e-07!6;UBERON:0006215!3.15e-07!6;UBERON:0001049!3.52e-07!57;UBERON:0005068!3.52e-07!57;UBERON:0006241!3.52e-07!57;UBERON:0007135!3.52e-07!57;UBERON:0002616!6.46e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.55e-08,15;UBERON:0007376,5.55e-08,15;UBERON:0007383,5.55e-08,15 | |||
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|short_description=p55@NRXN1 | |short_description=p55@NRXN1 | ||
}} | }} |
Revision as of 10:03, 19 November 2012
Short description: | p55@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_55_at_NRXN1_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | -299bp_to_ENST00000496792_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.74e-50 | 2 |
keratinocyte | 4.21e-21 | 5 |
stratified squamous epithelial cell | 7.67e-18 | 6 |
keratin accumulating cell | 7.67e-18 | 6 |
stratified epithelial cell | 7.67e-18 | 6 |
keratinizing barrier epithelial cell | 7.67e-18 | 6 |
epithelial fate stem cell | 7.67e-18 | 6 |
stratified epithelial stem cell | 7.67e-18 | 6 |
surface ectodermal cell | 7.67e-18 | 6 |
epidermal cell | 2.19e-12 | 9 |
general ecto-epithelial cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 5.55e-08 | 15 |
outer epithelium | 5.55e-08 | 15 |
enveloping layer of ectoderm | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.14e-26 | 4 |
bronchus cancer | 1.91e-15 | 7 |
bronchogenic carcinoma | 1.91e-15 | 7 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |
respiratory system cancer | 1.54e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.