FFCP PHASE1:Hg19::chr5:136834263..136834288,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!9.45e-12!180;CL:0000680!5.55e-09!57;CL:0000056!5.55e-09!57;CL:0000355!5.55e-09!57;CL:0000187!6.23e-08!54;CL:0002334!1.03e-07!12;CL:0000057!1.25e-07!75;CL:0000359!1.28e-07!32;CL:0000393!1.37e-07!60;CL:0000211!1.37e-07!60;CL:0000183!1.80e-07!59;CL:0000222!5.37e-07!119 | |ontology_enrichment_celltype=CL:0000055!9.45e-12!180;CL:0000680!5.55e-09!57;CL:0000056!5.55e-09!57;CL:0000355!5.55e-09!57;CL:0000187!6.23e-08!54;CL:0002334!1.03e-07!12;CL:0000057!1.25e-07!75;CL:0000359!1.28e-07!32;CL:0000393!1.37e-07!60;CL:0000211!1.37e-07!60;CL:0000183!1.80e-07!59;CL:0000222!5.37e-07!119 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@SPOCK1 | |short_description=p3@SPOCK1 | ||
}} | }} |
Revision as of 09:12, 19 November 2012
Short description: | p3@SPOCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SPOCK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000505690_5end |
EntrezGene: | SPOCK1 |
HGNC: | 11251 |
UniProt: | D6RB21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 3.91e-13 | 41 |
forebrain | 3.91e-13 | 41 |
anterior neural tube | 3.91e-13 | 41 |
future forebrain | 3.91e-13 | 41 |
neural tube | 3.67e-12 | 56 |
neural rod | 3.67e-12 | 56 |
future spinal cord | 3.67e-12 | 56 |
neural keel | 3.67e-12 | 56 |
regional part of nervous system | 1.24e-11 | 53 |
regional part of brain | 1.24e-11 | 53 |
tube | 2.04e-11 | 192 |
pre-chordal neural plate | 8.86e-11 | 61 |
neural plate | 1.84e-09 | 82 |
presumptive neural plate | 1.84e-09 | 82 |
telencephalon | 2.02e-09 | 34 |
brain | 7.44e-09 | 68 |
future brain | 7.44e-09 | 68 |
nervous system | 7.66e-09 | 89 |
structure with developmental contribution from neural crest | 8.66e-09 | 132 |
neurectoderm | 9.35e-09 | 86 |
epithelium | 1.39e-08 | 306 |
regional part of telencephalon | 1.51e-08 | 32 |
central nervous system | 1.98e-08 | 81 |
cell layer | 2.23e-08 | 309 |
anatomical conduit | 3.52e-08 | 240 |
brain grey matter | 6.81e-08 | 34 |
gray matter | 6.81e-08 | 34 |
ecto-epithelium | 9.29e-08 | 104 |
artery | 1.02e-07 | 42 |
arterial blood vessel | 1.02e-07 | 42 |
arterial system | 1.02e-07 | 42 |
systemic artery | 1.22e-07 | 33 |
systemic arterial system | 1.22e-07 | 33 |
cerebral hemisphere | 4.27e-07 | 32 |
adult organism | 9.85e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.