FFCP PHASE1:Hg19::chr3:5068581..5068590,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!6.47e-20!42;CL:0000860!4.46e-18!45;CL:0000557!1.51e-15!71;CL:0000766!7.17e-15!76;CL:0002009!8.90e-14!65;CL:0000839!3.55e-13!70;CL:0000738!4.12e-12!140;CL:0002194!9.02e-12!63;CL:0000576!9.02e-12!63;CL:0000040!9.02e-12!63;CL:0000559!9.02e-12!63;CL:0000763!1.64e-10!112;CL:0000049!1.64e-10!112;CL:0000080!1.70e-10!6;CL:0000988!4.44e-09!182;CL:0002031!1.86e-08!124;CL:0000037!2.29e-08!172;CL:0000566!2.29e-08!172;CL:0002087!1.34e-07!119;CL:0002032!9.76e-07!165;CL:0000837!9.76e-07!165 | |ontology_enrichment_celltype=CL:0002057!6.47e-20!42;CL:0000860!4.46e-18!45;CL:0000557!1.51e-15!71;CL:0000766!7.17e-15!76;CL:0002009!8.90e-14!65;CL:0000839!3.55e-13!70;CL:0000738!4.12e-12!140;CL:0002194!9.02e-12!63;CL:0000576!9.02e-12!63;CL:0000040!9.02e-12!63;CL:0000559!9.02e-12!63;CL:0000763!1.64e-10!112;CL:0000049!1.64e-10!112;CL:0000080!1.70e-10!6;CL:0000988!4.44e-09!182;CL:0002031!1.86e-08!124;CL:0000037!2.29e-08!172;CL:0000566!2.29e-08!172;CL:0002087!1.34e-07!119;CL:0002032!9.76e-07!165;CL:0000837!9.76e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0001014;3.36e-28;2!CL:0001016;3.36e-28;2!CL:0000473;1.06e-14;39!CL:0000234;1.06e-14;39!CL:0000860;1.55e-12;33!CL:0002057;1.55e-12;33!CL:0000453;6.88e-12;5!CL:0000840;4.64e-10;5!CL:0000766;8.34e-09;69!CL:0000771;4.68e-08;2!CL:0000576;1.17e-07;48!CL:0000990;5.44e-07;8 | |ontology_enrichment_celltype_v019=CL:0001014;3.36e-28;2!CL:0001016;3.36e-28;2!CL:0000473;1.06e-14;39!CL:0000234;1.06e-14;39!CL:0000860;1.55e-12;33!CL:0002057;1.55e-12;33!CL:0000453;6.88e-12;5!CL:0000840;4.64e-10;5!CL:0000766;8.34e-09;69!CL:0000771;4.68e-08;2!CL:0000576;1.17e-07;48!CL:0000990;5.44e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.60e-28,2;CL:0001016,3.60e-28,2;CL:0002009,2.68e-20,61;CL:0000557,2.05e-18,67;CL:0000473,7.44e-17,48;CL:0000234,7.44e-17,48;CL:0000860,6.55e-15,42;CL:0002057,6.55e-15,42;CL:0000766,9.60e-14,72;CL:0000763,1.64e-13,108;CL:0000049,1.64e-13,108;CL:0002194,2.43e-13,59;CL:0000576,2.43e-13,59;CL:0000040,2.43e-13,59;CL:0000559,2.43e-13,59;CL:0000738,1.31e-12,136;CL:0002031,5.00e-12,120;CL:0000453,7.07e-12,5;CL:0000839,7.22e-12,66;CL:0000988,3.70e-11,177;CL:0002032,1.92e-10,161;CL:0000837,1.92e-10,161;CL:0000840,4.75e-10,5;CL:0001029,4.75e-10,5;CL:0000037,5.99e-10,168;CL:0002087,2.84e-08,115;CL:0000771,4.38e-08,2;CL:0000990,5.53e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-10;42 | |ontology_enrichment_development_v019=CL:0002057;1.44e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.84e-14;1!DOID:0060061;1.84e-14;1!DOID:8691;1.84e-14;1!DOID:3910;7.03e-08;2 | |ontology_enrichment_disease_v019=DOID:0060060;1.84e-14;1!DOID:0060061;1.84e-14;1!DOID:8691;1.84e-14;1!DOID:3910;7.03e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.07e-14,1;DOID:0060061,1.07e-14,1;DOID:8691,1.07e-14,1;DOID:3910,7.03e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-15!102;UBERON:0003061!1.25e-15!102;UBERON:0002371!4.43e-15!80;UBERON:0002193!4.46e-14!112;UBERON:0001474!2.22e-13!86;UBERON:0004765!6.62e-11!101;UBERON:0001434!6.62e-11!101;UBERON:0002405!8.06e-11!115 | |ontology_enrichment_uberon=UBERON:0002390!1.25e-15!102;UBERON:0003061!1.25e-15!102;UBERON:0002371!4.43e-15!80;UBERON:0002193!4.46e-14!112;UBERON:0001474!2.22e-13!86;UBERON:0004765!6.62e-11!101;UBERON:0001434!6.62e-11!101;UBERON:0002405!8.06e-11!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.84e-14;1!UBERON:0004903;7.03e-08;2!UBERON:0002173;7.03e-08;2!UBERON:0002186;7.03e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0007195;1.84e-14;1!UBERON:0004903;7.03e-08;2!UBERON:0002173;7.03e-08;2!UBERON:0002186;7.03e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.45e-19,76;UBERON:0001474,4.59e-18,82;UBERON:0002390,6.66e-18,98;UBERON:0003061,6.66e-18,98;UBERON:0004765,2.28e-16,90;UBERON:0002193,3.88e-16,108;UBERON:0002405,8.30e-16,93;UBERON:0001434,1.26e-14,100;UBERON:0007195,2.41e-14,1;UBERON:0002204,2.89e-08,167;UBERON:0003081,6.01e-08,203;UBERON:0004903,7.03e-08,2;UBERON:0002173,7.03e-08,2;UBERON:0002186,7.03e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,1.10799081706375,0.401088894940283,0.217010870715852,0,0,0,0,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0.619412741790207,0,0.256160706529101,0.945928919554341,1.03423704220986,2.5819387343353,1.35426486594342,0,0,0.674170453335254,0.918251677112708,0.641858054152187,3.19668562899521,0,0,0.852449501065388,0.290209238628584,0.56738522469114,1.86846674698672,0,0,0.65156653411535,0,0.368277635987565,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0,0.288239906833923,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.960548020230999,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0.269605053441981,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.370691816839509,0.104421949505455,0,0,0,0,0.391329237864179,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,7.42413842119952,3.0952078182318,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.915360273587694,0.453692771289717,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0.450772826991655,0,0.406870733204662,0.545545977607678,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0.265729680626726,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.196295437002051,0,0,0.346576998451015,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.857440047187092,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,1.10799081706375,0.401088894940283,0.217010870715852,0,0,0,0,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0.619412741790207,0,0.256160706529101,0.945928919554341,1.03423704220986,2.5819387343353,1.35426486594342,0,0,0.674170453335254,0.918251677112708,0.641858054152187,3.19668562899521,0,0,0.852449501065388,0.290209238628584,0.56738522469114,1.86846674698672,0,0,0.65156653411535,0,0.368277635987565,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0,0.288239906833923,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.960548020230999,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0.269605053441981,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.370691816839509,0.104421949505455,0,0,0,0,0.391329237864179,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,7.42413842119952,3.0952078182318,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.915360273587694,0.453692771289717,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0.450772826991655,0,0.406870733204662,0.545545977607678,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0.265729680626726,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.196295437002051,0,0,0.346576998451015,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.857440047187092,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr3:5068581..5068590,+ | |short_description=p@chr3:5068581..5068590,+ | ||
}} | }} |
Revision as of 04:40, 19 November 2012
Short description: | p@chr3:5068581..5068590, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:5068581..5068590, + |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.60e-28 | 2 |
immature CD1a-positive Langerhans cell | 3.60e-28 | 2 |
macrophage dendritic cell progenitor | 2.68e-20 | 61 |
granulocyte monocyte progenitor cell | 2.05e-18 | 67 |
defensive cell | 7.44e-17 | 48 |
phagocyte | 7.44e-17 | 48 |
classical monocyte | 6.55e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.55e-15 | 42 |
myeloid leukocyte | 9.60e-14 | 72 |
myeloid cell | 1.64e-13 | 108 |
common myeloid progenitor | 1.64e-13 | 108 |
monopoietic cell | 2.43e-13 | 59 |
monocyte | 2.43e-13 | 59 |
monoblast | 2.43e-13 | 59 |
promonocyte | 2.43e-13 | 59 |
leukocyte | 1.31e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 5.00e-12 | 120 |
Langerhans cell | 7.07e-12 | 5 |
myeloid lineage restricted progenitor cell | 7.22e-12 | 66 |
hematopoietic cell | 3.70e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.92e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-10 | 161 |
immature conventional dendritic cell | 4.75e-10 | 5 |
common dendritic progenitor | 4.75e-10 | 5 |
hematopoietic stem cell | 5.99e-10 | 168 |
nongranular leukocyte | 2.84e-08 | 115 |
eosinophil | 4.38e-08 | 2 |
conventional dendritic cell | 5.53e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.45e-19 | 76 |
bone element | 4.59e-18 | 82 |
hematopoietic system | 6.66e-18 | 98 |
blood island | 6.66e-18 | 98 |
skeletal element | 2.28e-16 | 90 |
hemolymphoid system | 3.88e-16 | 108 |
immune system | 8.30e-16 | 93 |
skeletal system | 1.26e-14 | 100 |
stroma of bone marrow | 2.41e-14 | 1 |
musculoskeletal system | 2.89e-08 | 167 |
lateral plate mesoderm | 6.01e-08 | 203 |
bronchoalveolar duct junction | 7.03e-08 | 2 |
alveolar duct | 7.03e-08 | 2 |
bronchiole | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.07e-14 | 1 |
cutaneous T cell lymphoma | 1.07e-14 | 1 |
mycosis fungoides | 1.07e-14 | 1 |
lung adenocarcinoma | 7.03e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.