FFCP PHASE1:Hg19::chr11:125462725..125462768,+: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0000134;2.99e-08;55!CL:0000048;1.63e-07;58!CL:0000057;2.06e-07;73!CL:0000723;3.65e-07;61!CL:0002620;4.40e-07;23!CL:0000359;8.34e-07;32 | |ontology_enrichment_celltype_v019=CL:0000134;2.99e-08;55!CL:0000048;1.63e-07;58!CL:0000057;2.06e-07;73!CL:0000723;3.65e-07;61!CL:0002620;4.40e-07;23!CL:0000359;8.34e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.83e-15,76;CL:0002321,6.84e-13,250;CL:0000222,1.08e-09,121;CL:0000680,2.21e-09,58;CL:0000056,2.21e-09,58;CL:0000355,2.21e-09,58;CL:0000187,9.53e-09,55;CL:0000192,2.29e-08,43;CL:0000514,2.29e-08,43;CL:0000359,2.05e-07,32;CL:0002620,4.52e-07,23;CL:0000393,8.28e-07,61;CL:0000211,8.28e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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|phase1_expression=181.315022512016,119.896293378951,227.218499402706,167.122408249728,187.276698565034,270.424942471114,78.5229622321763,154.771368989574,75.7438321779532,173.242425233564,55.8240934377942,191.573083358161,130.300887244856,169.436137202304,127.919387030975,200.352893642629,159.11135539833,143.140777715925,130.278057277065,189.975792612484,127.09243064517,108.455333631418,125.085126376272,84.1777714198238,113.616088833297,64.8749814800106,66.8298798122558,67.2977180231958,35.7961491932503,32.6254988382631,49.0767110911961,91.0227012234138,113.855837298179,208.911015744235,99.7002871468482,103.64137048333,80.740120817083,33.7937199204445,20.0544447470142,21.2670653301535,109.270751429083,105.913228788206,109.984767379798,25.5900900252034,42.3221056931467,32.2636801379796,25.799623096531,57.5635043230556,52.6500830521676,21.2892370318391,30.483124076963,28.8508320464074,18.6162667597774,36.7926269642781,25.7310324529249,22.9655654241978,52.1250746610485,47.6413787023579,20.8137046812214,37.548696167903,26.2128221577607,22.7597397128834,26.9275937789203,19.1801137739712,21.4754836585152,41.4191214024532,30.5182902007832,24.8736178604176,34.9393555341535,35.1845928422289,32.6915731422019,33.5132648748684,28.4816148696796,41.4060361171406,28.2763718953508,32.0777727627815,48.9752831798719,39.7968766029992,46.2889689687591,27.0762106554186,24.0689179410899,29.5915929098707,66.8785728953026,50.2447522361161,45.3649719470413,53.3412778208134,52.4518743017176,47.7044525162221,64.7823975329165,41.0243114450207,17.6456020423929,13.5064553555316,17.9668417218858,40.973111859498,35.8725480308183,116.679149555359,23.8018821837738,24.3666672904482,21.1769543969494,65.2027332023645,24.4441699975193,26.0396293154103,29.2240092611867,100.492232110427,34.4688911745559,37.2176942900483,40.0789718372223,56.7444546384741,54.6249259751489,65.7751618414704,65.4949542152461,81.4346670915498,32.4747573324912,34.2452259954833,29.2699466653935,99.1456748603704,35.2562854113768,35.3936268847109,42.254288567257,55.1118166780687,54.0399266700827,57.0271226669025,69.4151298948533,71.5445156353199,49.9722906209383,56.58976323852,55.8367037906312,27.6201238217883,21.6626558584641,22.7374314095994,41.4471672733735,162.980308907984,212.763302907634,226.260909392738,183.489675292736,151.2197657951,466.832850918995,290.521017570674,119.964682981202,98.8913112683035,118.752630257106,82.1893698748147,92.8952985145983,99.3702306662271,78.2159218707787,79.2290304711666,67.1437700620269,115.667952788091,97.2391348326217,115.151825412165,162.587649225965,121.293077909964,173.570250803797,118.714667804042,126.688829735392,137.834139011974,152.357330605335,136.444048841406,153.691025480659,169.703350671688,159.520409575222,141.410611663643,93.2317059834008,193.390780261927,155.547253993298,159.667914171935,100.589158936524,99.7737717082235,124.186476347365,185.106803615785,87.9368370865955,7.9068250461638,7.75560528296651,141.294472894181,230.594985586628,181.334892703678,242.30880088819,587.154562672822,148.606052141112,104.846711226611,217.767951288598,176.367297118269,196.685374372652,137.674306855221,151.038798476836,296.811915611711,160.17690700544,150.903002100965,102.700665277175,154.597863638546,87.4274781228036,150.198723765375,131.278957882555,151.686871238428,171.285349682855,128.853198860045,126.057453034434,168.696405734052,132.535074093306,253.024858618771,86.9527951597648,163.454366649398,119.863542037342,183.416444450529,163.299674967672,177.762921563431,135.214253015937,174.458697700112,400.39766685754,255.841751804644,217.65406249087,593.580188054948,241.658181064139,315.867302095941,301.509307257176,746.666493835362,258.890122713305,264.298161633588,189.438691405852,192.358807614386,653.572659823087,275.758492849051,244.336813519413,116.922816163795,171.284563731044,124.473194398828,69.5250124938694,66.9275330023501,81.9167297230105,74.1176543359899,88.0599769555943,75.9152906877726,189.303934119077,136.367078896892,157.473810341828,94.2666893904917,118.388234993812,120.436322440561,110.422972001157,117.131360523372,124.742483160338,128.54887201452,120.296203889326,116.763912866702,127.151509401224,121.964848752006,146.15478001568,96.7668239243776,193.851359337089,157.29932118253,135.627887259359,119.90492043467,151.242216110439,54.7414243274167,251.880322136297,245.341968726892,113.37204482711,180.966822744767,110.380811707971,146.10456646016,206.236657261436,141.431130798023,125.568267561988,141.666954879544,267.104779386494,152.739701731216,133.802813134641,123.094436495785,50.5730814693936,56.6600866982616,101.687623514095,122.618234932961,84.2738690177089,103.107217385455,199.058821915649,162.75781163426,137.651449394278,118.578646913696,95.4622871121376,177.35876564254,204.008221608645,80.4433088298196,71.3393769413959,72.4631567867421,209.225561692697,206.27374980147,152.382681373061,162.51882372157,147.968762000083,174.79965966516,154.632100053143,294.792620743953,248.49723923497,207.327334015826,210.195809822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| ||
|short_description=p1@STT3A | |short_description=p1@STT3A | ||
}} | }} |
Revision as of 03:43, 19 November 2012
Short description: | p1@STT3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_STT3A_5end |
Coexpression cluster: | C3113_Smooth_Fibroblast_lymphangiectasia_colon_gall_mesenchymal_Chondrocyte |
Association with transcript: | 0bp_to_ENST00000529196, ENST00000531491, NM_152713, uc001qcd.2, uc001qce.2, uc009zbm.2, uc010sbg.1_5end |
EntrezGene: | STT3A |
HGNC: | 6172 |
UniProt: | E9PNQ1P46977 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.83e-15 | 76 |
embryonic cell | 6.84e-13 | 250 |
mesodermal cell | 1.08e-09 | 121 |
muscle precursor cell | 2.21e-09 | 58 |
myoblast | 2.21e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.21e-09 | 58 |
muscle cell | 9.53e-09 | 55 |
smooth muscle cell | 2.29e-08 | 43 |
smooth muscle myoblast | 2.29e-08 | 43 |
vascular associated smooth muscle cell | 2.05e-07 | 32 |
skin fibroblast | 4.52e-07 | 23 |
electrically responsive cell | 8.28e-07 | 61 |
electrically active cell | 8.28e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 2.12e-13 | 148 |
trunk | 8.20e-12 | 199 |
mesenchyme | 3.70e-11 | 160 |
entire embryonic mesenchyme | 3.70e-11 | 160 |
trunk mesenchyme | 3.11e-10 | 122 |
epithelial tube | 8.99e-10 | 117 |
vasculature | 1.81e-08 | 78 |
vascular system | 1.81e-08 | 78 |
somite | 2.59e-08 | 71 |
presomitic mesoderm | 2.59e-08 | 71 |
presumptive segmental plate | 2.59e-08 | 71 |
dermomyotome | 2.59e-08 | 71 |
trunk paraxial mesoderm | 2.59e-08 | 71 |
dense mesenchyme tissue | 3.57e-08 | 73 |
artery | 4.56e-08 | 42 |
arterial blood vessel | 4.56e-08 | 42 |
arterial system | 4.56e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 6.88e-08 | 83 |
paraxial mesoderm | 7.87e-08 | 72 |
presumptive paraxial mesoderm | 7.87e-08 | 72 |
skeletal muscle tissue | 8.44e-08 | 62 |
striated muscle tissue | 8.44e-08 | 62 |
myotome | 8.44e-08 | 62 |
multilaminar epithelium | 9.69e-08 | 83 |
vessel | 9.98e-08 | 68 |
epithelial vesicle | 1.91e-07 | 78 |
muscle tissue | 3.04e-07 | 64 |
musculature | 3.04e-07 | 64 |
musculature of body | 3.04e-07 | 64 |
systemic artery | 7.80e-07 | 33 |
systemic arterial system | 7.80e-07 | 33 |
surface structure | 9.92e-07 | 99 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.