FFCP PHASE1:Hg19::chr7:127292240..127292260,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.90e-13!180;CL:0002321!2.04e-11!248;CL:0000220!2.60e-11!246;CL:0000222!5.52e-10!119;CL:0000548!2.63e-08!679;CL:0000004!2.63e-08!679;CL:0000255!2.63e-08!679;CL:0000183!4.86e-08!59;CL:0000012!1.10e-07!682;CL:0000066!1.60e-07!254;CL:0000057!3.10e-07!75;CL:0000359!3.47e-07!32;CL:0000192!4.80e-07!42;CL:0000514!4.80e-07!42;CL:0000187!6.34e-07!54;CL:0000144!9.65e-07!625 | |ontology_enrichment_celltype=CL:0000055!2.90e-13!180;CL:0002321!2.04e-11!248;CL:0000220!2.60e-11!246;CL:0000222!5.52e-10!119;CL:0000548!2.63e-08!679;CL:0000004!2.63e-08!679;CL:0000255!2.63e-08!679;CL:0000183!4.86e-08!59;CL:0000012!1.10e-07!682;CL:0000066!1.60e-07!254;CL:0000057!3.10e-07!75;CL:0000359!3.47e-07!32;CL:0000192!4.80e-07!42;CL:0000514!4.80e-07!42;CL:0000187!6.34e-07!54;CL:0000144!9.65e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.27e-07;32 | |ontology_enrichment_celltype_v019=CL:0000359;9.27e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.94e-12,250;CL:0000222,1.41e-10,121;CL:0000057,1.45e-07,76;CL:0000192,2.14e-07,43;CL:0000514,2.14e-07,43;CL:0000066,2.63e-07,253;CL:0000187,3.00e-07,55;CL:0000359,3.47e-07,32;CL:0000680,7.48e-07,58;CL:0000056,7.48e-07,58;CL:0000355,7.48e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;7.99e-08;33!UBERON:0004571;7.99e-08;33!UBERON:0001637;1.15e-07;42!UBERON:0003509;1.15e-07;42!UBERON:0004572;1.15e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0004573;7.99e-08;33!UBERON:0004571;7.99e-08;33!UBERON:0001637;1.15e-07;42!UBERON:0003509;1.15e-07;42!UBERON:0004572;1.15e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,6.24e-12,117;UBERON:0001637,2.69e-10,42;UBERON:0003509,2.69e-10,42;UBERON:0004572,2.69e-10,42;UBERON:0003104,8.05e-10,160;UBERON:0009142,8.05e-10,160;UBERON:0000490,1.08e-09,148;UBERON:0000055,1.81e-09,68;UBERON:0005256,2.99e-09,122;UBERON:0007503,3.84e-09,78;UBERON:0007500,4.86e-09,59;UBERON:0001981,4.86e-09,59;UBERON:0004537,4.86e-09,59;UBERON:0006965,4.86e-09,59;UBERON:0002100,6.35e-09,199;UBERON:0004573,1.26e-08,33;UBERON:0004571,1.26e-08,33;UBERON:0002049,1.91e-08,78;UBERON:0007798,1.91e-08,78;UBERON:0004872,2.62e-08,83;UBERON:0000486,4.04e-08,83;UBERON:0002329,1.15e-07,71;UBERON:0003059,1.15e-07,71;UBERON:0007282,1.15e-07,71;UBERON:0004290,1.15e-07,71;UBERON:0009618,1.15e-07,71;UBERON:0007524,1.87e-07,73;UBERON:0003077,2.74e-07,72;UBERON:0007285,2.74e-07,72 | |||
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| ||
|short_description=p1@SND1 | |short_description=p1@SND1 | ||
}} | }} |
Revision as of 02:41, 19 November 2012
Short description: | p1@SND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SND1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000438400, ENST00000463020_5end |
EntrezGene: | SND1 |
HGNC: | 30646 |
UniProt: | E7ESM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.94e-12 | 250 |
mesodermal cell | 1.41e-10 | 121 |
fibroblast | 1.45e-07 | 76 |
smooth muscle cell | 2.14e-07 | 43 |
smooth muscle myoblast | 2.14e-07 | 43 |
epithelial cell | 2.63e-07 | 253 |
muscle cell | 3.00e-07 | 55 |
vascular associated smooth muscle cell | 3.47e-07 | 32 |
muscle precursor cell | 7.48e-07 | 58 |
myoblast | 7.48e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.48e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 6.24e-12 | 117 |
artery | 2.69e-10 | 42 |
arterial blood vessel | 2.69e-10 | 42 |
arterial system | 2.69e-10 | 42 |
mesenchyme | 8.05e-10 | 160 |
entire embryonic mesenchyme | 8.05e-10 | 160 |
unilaminar epithelium | 1.08e-09 | 148 |
vessel | 1.81e-09 | 68 |
trunk mesenchyme | 2.99e-09 | 122 |
epithelial vesicle | 3.84e-09 | 78 |
epithelial tube open at both ends | 4.86e-09 | 59 |
blood vessel | 4.86e-09 | 59 |
blood vasculature | 4.86e-09 | 59 |
vascular cord | 4.86e-09 | 59 |
trunk | 6.35e-09 | 199 |
systemic artery | 1.26e-08 | 33 |
systemic arterial system | 1.26e-08 | 33 |
vasculature | 1.91e-08 | 78 |
vascular system | 1.91e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 2.62e-08 | 83 |
multilaminar epithelium | 4.04e-08 | 83 |
somite | 1.15e-07 | 71 |
presomitic mesoderm | 1.15e-07 | 71 |
presumptive segmental plate | 1.15e-07 | 71 |
dermomyotome | 1.15e-07 | 71 |
trunk paraxial mesoderm | 1.15e-07 | 71 |
dense mesenchyme tissue | 1.87e-07 | 73 |
paraxial mesoderm | 2.74e-07 | 72 |
presumptive paraxial mesoderm | 2.74e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.